Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082439
CDS Infomation

pacid=37475748 polypeptide=PGSC0003DMP400055589 locus=PGSC0003DMG400032543 ID=PGSC0003DMT400082439.v4.03 annot-version=v4.03
Sequence

ATGGCTCTACTGCTTTCAACTTCAACAGCAGCAGCAGCAGCAGCTGCCTCTTCTCATTTA
TCTTTGAATTCCATCTTTGAAACAAAGAATTTCTTGGTACCCCATCTCCAATTTACAGGT
TTTACTCAAAAACCCCACAAGAAAAGATGTCAGCAAAAAATTCCTTTCTTGGTTTTATCT
GTAATAAAGGGTACTCAATCAAGAACAAAAAGGAGAAGTGATAGTTGTAGTAGTAGTATT
TCAAGAAAAGATAGTAACTTTAAGCTCTTATTGAGTGAAGGGAGGGATAATGATGAGAGT
TATGGGTGTATATGTCCTGGATGTGGAATCTTTATGCAGGATGAAGACCCAAATCATCCT
GGTTATTACAAGAAAAAAAAGGTGGAAAAAAGTGTAGAGGATTTTGTGGATGATGAGGAT
GTTGTTGTTAGTGAAGGTGGGGATAATGAAGAAGAGGAGGAATTTGGGGATTTTATTGAG
GGGGAGTTGGAAGAAAGTGGAAGTGAAGAAATGGGGTCAGGGAGTGAGGATGGATTTGAT
GATTGGGATTCCGAGGAATGGGAATCGGGGTTGGAAGAAGATGAGGATGATTTGAAAGAG
TTAGATGGTTTTTTGCCAGCGGGTTTAGGTTATGGTAACATTACAGAGGAGGTTCCTGAG
AAAGGAAAGAAGAAAAGGGTGTCGAAATCGGAGAGGAAAAGGATGGCGAGGGAAGCTGCT
AAGGGAGAGAAAGAGGAGGTCACGGTTTGTGCTCGATGTCATTCGTTGAGGAACTATGGA
CAAGTGAAGAATGAGCTGGCCGAAAACTTGATACCCGATTTTGATTTTGACCAGTTAATT
ACGAGTAGGTTGATGAGACCTACTGGGAAAGCTGATGCGACGGTTGTGGTTATGGTGGTT
GATTGTGTTGATTTTGATGGTTCCTTTCCGAAGCGAGCTGCTAAATCTTTGTTTAAGGCA
CTAGAACAAAGCAAGGATGGCTTGAAACAAAGTAAGAAGTTGCCAAAGCTTGTTCTTGTG
GCTACCAAGGTTGACCTTCTCCCTTCTCAAATTTCCCCTGCGCGTTTGGACAAATGGGTT
CGACACCGTGCTAAAGCTAATGGAGCACCTAAACTGAGTGGAGTTTACATGGTAAGTTCC
CGTAAAGATTTAGGTGTTAGAAATTTGCTGGCATTTATTAAAGAATTGGCTGGTCCTCGA
GGAAATGTGTGGGTTATTGGGGCGCAAAATGCAGGGAAGTCGACATTAATAAATGCATTT
GCCAAGAAAGGAGGAGTAAAAGCTACAAAGCTTACAGAAGCTCCTGTACCTGGAACTACT
CTGGGAATCCTGAGAATTGGAGGAATTTTGTCAGCCAAGGCAAAGATGTATGACACGCCG
GGCCTCCTACATCCATATCTTATGTCCATGCGATTAAATAGGGAGGAGCAGAAAATGGTT
GAGATACGAAAGGAGCTACAACCTCGAACTTATAGGATTAAGCATGGGCAGACTGTACAT
ATAGGGGGCTTAGTTAGACTGGATCTAGTTCAAGCCTCAGTTGAAACAATCTATGTCACT
GTCTGGGCATCGCCTAGTGTATCTCTTCATCTAGGGAAGACAGAAAATGCTGATGAGCTC
AAGAACAACCATGCTGGAGTGAGATTGCAGCCTCCCATTTCCATGGAGCGAGTTTCTGAG
TTGGGACAATGGAAAGAGAGGGAAGTAAAAGCACGTGGAACGAGCTGGGATGTCAAGAGC
ATGGATGTTGCGGTTGCTGGCTTAGGATGGTTCTCCCTAGGTTTGAAAGGCGAAGCAGAT
TTAGTGTTGTGGACATATGATGGCATTCAGATCACTTTGCGTGAACCATTGGTACTTGAT
CGTGCAGCCTCTATTGAAAGACCTGGATTTTGGCTACCAAAGGCTATATCAGAAGCCATC
GCTAACTCATCGAAGCTTGAAGGTCAAGAAGCAAGGGAAAATAATCCATCAGAGGAGACA
ATGCAACTTTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055589
PEP Infomation

pacid=37475748 transcript=PGSC0003DMT400082439 locus=PGSC0003DMG400032543 ID=PGSC0003DMT400082439.v4.03 annot-version=v4.03
Sequence

MALLLSTSTAAAAAAASSHLSLNSIFETKNFLVPHLQFTGFTQKPHKKRCQQKIPFLVLS
VIKGTQSRTKRRSDSCSSSISRKDSNFKLLLSEGRDNDESYGCICPGCGIFMQDEDPNHP
GYYKKKKVEKSVEDFVDDEDVVVSEGGDNEEEEEFGDFIEGELEESGSEEMGSGSEDGFD
DWDSEEWESGLEEDEDDLKELDGFLPAGLGYGNITEEVPEKGKKKRVSKSERKRMAREAA
KGEKEEVTVCARCHSLRNYGQVKNELAENLIPDFDFDQLITSRLMRPTGKADATVVVMVV
DCVDFDGSFPKRAAKSLFKALEQSKDGLKQSKKLPKLVLVATKVDLLPSQISPARLDKWV
RHRAKANGAPKLSGVYMVSSRKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINAF
AKKGGVKATKLTEAPVPGTTLGILRIGGILSAKAKMYDTPGLLHPYLMSMRLNREEQKMV
EIRKELQPRTYRIKHGQTVHIGGLVRLDLVQASVETIYVTVWASPSVSLHLGKTENADEL
KNNHAGVRLQPPISMERVSELGQWKEREVKARGTSWDVKSMDVAVAGLGWFSLGLKGEAD
LVLWTYDGIQITLREPLVLDRAASIERPGFWLPKAISEAIANSSKLEGQEARENNPSEET
MQLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400082439
Transcript Infomation

pacid=37475748 locus=PGSC0003DMG400032543 ID=PGSC0003DMT400082439.v4.03 annot-version=v4.03
Sequence

ATGGCTCTACTGCTTTCAACTTCAACAGCAGCAGCAGCAGCAGCTGCCTCTTCTCATTTA
TCTTTGAATTCCATCTTTGAAACAAAGAATTTCTTGGTACCCCATCTCCAATTTACAGGT
TTTACTCAAAAACCCCACAAGAAAAGATGTCAGCAAAAAATTCCTTTCTTGGTTTTATCT
GTAATAAAGGGTACTCAATCAAGAACAAAAAGGAGAAGTGATAGTTGTAGTAGTAGTATT
TCAAGAAAAGATAGTAACTTTAAGCTCTTATTGAGTGAAGGGAGGGATAATGATGAGAGT
TATGGGTGTATATGTCCTGGATGTGGAATCTTTATGCAGGATGAAGACCCAAATCATCCT
GGTTATTACAAGAAAAAAAAGGTGGAAAAAAGTGTAGAGGATTTTGTGGATGATGAGGAT
GTTGTTGTTAGTGAAGGTGGGGATAATGAAGAAGAGGAGGAATTTGGGGATTTTATTGAG
GGGGAGTTGGAAGAAAGTGGAAGTGAAGAAATGGGGTCAGGGAGTGAGGATGGATTTGAT
GATTGGGATTCCGAGGAATGGGAATCGGGGTTGGAAGAAGATGAGGATGATTTGAAAGAG
TTAGATGGTTTTTTGCCAGCGGGTTTAGGTTATGGTAACATTACAGAGGAGGTTCCTGAG
AAAGGAAAGAAGAAAAGGGTGTCGAAATCGGAGAGGAAAAGGATGGCGAGGGAAGCTGCT
AAGGGAGAGAAAGAGGAGGTCACGGTTTGTGCTCGATGTCATTCGTTGAGGAACTATGGA
CAAGTGAAGAATGAGCTGGCCGAAAACTTGATACCCGATTTTGATTTTGACCAGTTAATT
ACGAGTAGGTTGATGAGACCTACTGGGAAAGCTGATGCGACGGTTGTGGTTATGGTGGTT
GATTGTGTTGATTTTGATGGTTCCTTTCCGAAGCGAGCTGCTAAATCTTTGTTTAAGGCA
CTAGAACAAAGCAAGGATGGCTTGAAACAAAGTAAGAAGTTGCCAAAGCTTGTTCTTGTG
GCTACCAAGGTTGACCTTCTCCCTTCTCAAATTTCCCCTGCGCGTTTGGACAAATGGGTT
CGACACCGTGCTAAAGCTAATGGAGCACCTAAACTGAGTGGAGTTTACATGGTAAGTTCC
CGTAAAGATTTAGGTGTTAGAAATTTGCTGGCATTTATTAAAGAATTGGCTGGTCCTCGA
GGAAATGTGTGGGTTATTGGGGCGCAAAATGCAGGGAAGTCGACATTAATAAATGCATTT
GCCAAGAAAGGAGGAGTAAAAGCTACAAAGCTTACAGAAGCTCCTGTACCTGGAACTACT
CTGGGAATCCTGAGAATTGGAGGAATTTTGTCAGCCAAGGCAAAGATGTATGACACGCCG
GGCCTCCTACATCCATATCTTATGTCCATGCGATTAAATAGGGAGGAGCAGAAAATGGTT
GAGATACGAAAGGAGCTACAACCTCGAACTTATAGGATTAAGCATGGGCAGACTGTACAT
ATAGGGGGCTTAGTTAGACTGGATCTAGTTCAAGCCTCAGTTGAAACAATCTATGTCACT
GTCTGGGCATCGCCTAGTGTATCTCTTCATCTAGGGAAGACAGAAAATGCTGATGAGCTC
AAGAACAACCATGCTGGAGTGAGATTGCAGCCTCCCATTTCCATGGAGCGAGTTTCTGAG
TTGGGACAATGGAAAGAGAGGGAAGTAAAAGCACGTGGAACGAGCTGGGATGTCAAGAGC
ATGGATGTTGCGGTTGCTGGCTTAGGATGGTTCTCCCTAGGTTTGAAAGGCGAAGCAGAT
TTAGTGTTGTGGACATATGATGGCATTCAGATCACTTTGCGTGAACCATTGGTACTTGAT
CGTGCAGCCTCTATTGAAAGACCTGGATTTTGGCTACCAAAGGCTATATCAGAAGCCATC
GCTAACTCATCGAAGCTTGAAGGTCAAGAAGCAAGGGAAAATAATCCATCAGAGGAGACA
ATGCAACTTTCATAA