Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082383
CDS Infomation

pacid=37466894 polypeptide=PGSC0003DMP400055547 locus=PGSC0003DMG400032508 ID=PGSC0003DMT400082383.v4.03 annot-version=v4.03
Sequence

ATGAATCAGGCAAAAATCAAGCGCAGAGTTGGTAAATATGAAATGGGAAGGACAATTGGT
GAGGGAACATTTGCTAAAGTTAAATTTGCGAGGAATTCGGAGACAGGAGAACCTGTAGCA
ATCAAAATTCTTGATAAGGATAAGGTCCTTAAGCACAAAATGGCTGAGCAGATAAAGCGG
GAGATAGCTACAATGAAGTTAATCAGGCATCCACATGTCGTTCAGTTATACGAGGTGTTG
GCTAGCAAGACAAAGATATTCATTGTTCTGGAGTTCGTTACAGGTGGAGAGCTCTTTGAC
AAAATTGTAAATCATGGACGGATGCATGAAAAAGAAGCAAGGAAATATTTTCAGCAGCTT
ATTAATGCTGTTGATTACTGTCATAGCAGGGGAGTCTACCATAGAGATTTAAAGCCTGAG
AATTTACTGTTGGATGCCTCAGGAAACCTCAAGGTTTCTGATTTTGGATTGAGTGCTCTG
TCCCAGCAAGTCAGGGATGATGGCTTACTCCACACCACATGTGGAACTCCCAACTATGTT
GCTCCTGAGGTACTCAATGATCATGGATATGATGGTACAACCGCGGATCTGTGGTCGTGC
GGAGTCATACTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACTCCAATCTTATG
AACCTGTATAAAAAAATCTCTGTTGCTGAATTTACATGTCCTCCTTGGATGTCTTTTGGT
GCTATGAAGTTAATTACTCGCATCTTGGATCCGAACCCTATGACACGTATCACCATCCCA
GAAATTCTGGAGGACGAGTGGTTCAAGAAAGATTATAAATCTCCCATTTTTAATGAGAAA
GGAGATGCCAACCTGGATGATGTTGAAGCTGTCTTCAAGGATTCTGAAGAACATCATGTA
ACAGAGAAAAAGGAAGAGCAGCCAACTCCCATGAATGCATTCGAGTTGATTTCAATGTCA
AAAGGACTCAACCTTGGGAATCTCTTCGATGAACAGGGATTTAAGAGAGAAACAAGGTTC
ACATCTAAATGCTCCGCCAATGAAATTATCAGTAAGATTGAAGAAGCTGCGAAGCCCCTC
GGTTTTGATGTTCACAAAAAGAACTACAAGATGAGACTTGAAAATGTTAAAGCTGGAAGA
AAAGGGAACCTTAATGTTGCCACTGAGGTATTTCAAGTTGCCCCTTCTCTTCATATGGTT
GAAGTGCGGAAGGCAAAAGGAGATACTTTGGAATTCCACAAGTTTTACAAGAATCTTTCG
ACTAGTCTAGAGGATGTAGTGTGGAAAACTGAAGAGGACATGCAAGATAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055547
PEP Infomation

pacid=37466894 transcript=PGSC0003DMT400082383 locus=PGSC0003DMG400032508 ID=PGSC0003DMT400082383.v4.03 annot-version=v4.03
Sequence

MNQAKIKRRVGKYEMGRTIGEGTFAKVKFARNSETGEPVAIKILDKDKVLKHKMAEQIKR
EIATMKLIRHPHVVQLYEVLASKTKIFIVLEFVTGGELFDKIVNHGRMHEKEARKYFQQL
INAVDYCHSRGVYHRDLKPENLLLDASGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYV
APEVLNDHGYDGTTADLWSCGVILFVLLAGYLPFDDSNLMNLYKKISVAEFTCPPWMSFG
AMKLITRILDPNPMTRITIPEILEDEWFKKDYKSPIFNEKGDANLDDVEAVFKDSEEHHV
TEKKEEQPTPMNAFELISMSKGLNLGNLFDEQGFKRETRFTSKCSANEIISKIEEAAKPL
GFDVHKKNYKMRLENVKAGRKGNLNVATEVFQVAPSLHMVEVRKAKGDTLEFHKFYKNLS
TSLEDVVWKTEEDMQDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400082383
Transcript Infomation

pacid=37466894 locus=PGSC0003DMG400032508 ID=PGSC0003DMT400082383.v4.03 annot-version=v4.03
Sequence

ATGAATCAGGCAAAAATCAAGCGCAGAGTTGGTAAATATGAAATGGGAAGGACAATTGGT
GAGGGAACATTTGCTAAAGTTAAATTTGCGAGGAATTCGGAGACAGGAGAACCTGTAGCA
ATCAAAATTCTTGATAAGGATAAGGTCCTTAAGCACAAAATGGCTGAGCAGATAAAGCGG
GAGATAGCTACAATGAAGTTAATCAGGCATCCACATGTCGTTCAGTTATACGAGGTGTTG
GCTAGCAAGACAAAGATATTCATTGTTCTGGAGTTCGTTACAGGTGGAGAGCTCTTTGAC
AAAATTGTAAATCATGGACGGATGCATGAAAAAGAAGCAAGGAAATATTTTCAGCAGCTT
ATTAATGCTGTTGATTACTGTCATAGCAGGGGAGTCTACCATAGAGATTTAAAGCCTGAG
AATTTACTGTTGGATGCCTCAGGAAACCTCAAGGTTTCTGATTTTGGATTGAGTGCTCTG
TCCCAGCAAGTCAGGGATGATGGCTTACTCCACACCACATGTGGAACTCCCAACTATGTT
GCTCCTGAGGTACTCAATGATCATGGATATGATGGTACAACCGCGGATCTGTGGTCGTGC
GGAGTCATACTCTTTGTATTGCTTGCAGGTTACTTGCCTTTTGATGACTCCAATCTTATG
AACCTGTATAAAAAAATCTCTGTTGCTGAATTTACATGTCCTCCTTGGATGTCTTTTGGT
GCTATGAAGTTAATTACTCGCATCTTGGATCCGAACCCTATGACACGTATCACCATCCCA
GAAATTCTGGAGGACGAGTGGTTCAAGAAAGATTATAAATCTCCCATTTTTAATGAGAAA
GGAGATGCCAACCTGGATGATGTTGAAGCTGTCTTCAAGGATTCTGAAGAACATCATGTA
ACAGAGAAAAAGGAAGAGCAGCCAACTCCCATGAATGCATTCGAGTTGATTTCAATGTCA
AAAGGACTCAACCTTGGGAATCTCTTCGATGAACAGGGATTTAAGAGAGAAACAAGGTTC
ACATCTAAATGCTCCGCCAATGAAATTATCAGTAAGATTGAAGAAGCTGCGAAGCCCCTC
GGTTTTGATGTTCACAAAAAGAACTACAAGATGAGACTTGAAAATGTTAAAGCTGGAAGA
AAAGGGAACCTTAATGTTGCCACTGAGGTATTTCAAGTTGCCCCTTCTCTTCATATGGTT
GAAGTGCGGAAGGCAAAAGGAGATACTTTGGAATTCCACAAGTTTTACAAGAATCTTTCG
ACTAGTCTAGAGGATGTAGTGTGGAAAACTGAAGAGGACATGCAAGATAGGTAG