Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082112
CDS Infomation

pacid=37456395 polypeptide=PGSC0003DMP400055474 locus=PGSC0003DMG400032264 ID=PGSC0003DMT400082112.v4.03 annot-version=v4.03
Sequence

ATGGCGGGGGAAAAGATTGGAATTGCCAAGGATGTAACTGAATTGATTGGTAACACTCCT
TTGGTATACCTGAATAATGTTGTGGATGGGTGTGTTGCACGTGTTGCTGCCAAGCTGGAA
AGCATGGAGCCATGCTCTAGTGTTAAGGATAGGATCGGTTATAGTATGATTACAGATGCT
GAGGAGAAGGGTCTCATCAAACCCGGCGAGAGTGTCCTCATCGAACCTACGAGTGGAAAC
ACCGGTGTAGGATTGGCATTCATGGCTGCTGCTAAAGGCTACAAACTCATTATTACGATG
CCTTCTTCAATGAGTCTTGAGAGAAGAATTATTCTGCGTGCTTTCGGTGCTGAGTTGGTG
CTTACCGATCCAGCAAAAGGGATGAAGGGTGCTATTTCAAAGGCTGAAGAGATAAAGGCC
AAAACACCCAACTCCTATATTCTTCAGCAATTTGAAAACCCTGCTAACCCAAAGATACAC
TATGAGACCACTGGTCCTGAGATCTGGAAAGGCTCAAACGGGAAAGTGGATGCTCTAGTC
TCTGGAATTGGAACAGGAGGCACGATAACTGGTTCAGGCAAGTATTTGAGAGAGCAGAAC
CCCAACGTTAAGCTGTATGGCGTGGAACCAGTTGAAAGTGCTATCCTTTCTGGTGGAAAG
CCTGGTCCACATAAGATTCAGGGGATTGGTGCTGGTTTCATTCCTGGTGTTTTGGAAGTT
AACCTTATTGATGATGTAGTTCAGGTTTCAAGTGAAGAATCCATAGAAATGGCTAAGCTT
CTGGCATTGAAGGAAGGATTGCTAGTAAGTTTGACTGTTTTAACTGTGCTCCCCCTTCCC
CCTTGCAGCTTTCACAAAAAAAGAAAAAAGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055474
PEP Infomation

pacid=37456395 transcript=PGSC0003DMT400082112 locus=PGSC0003DMG400032264 ID=PGSC0003DMT400082112.v4.03 annot-version=v4.03
Sequence

MAGEKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDA
EEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRAFGAELV
LTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALV
SGIGTGGTITGSGKYLREQNPNVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLEV
NLIDDVVQVSSEESIEMAKLLALKEGLLVSLTVLTVLPLPPCSFHKKRKKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400082112
Transcript Infomation

pacid=37456395 locus=PGSC0003DMG400032264 ID=PGSC0003DMT400082112.v4.03 annot-version=v4.03
Sequence

ATGGCGGGGGAAAAGATTGGAATTGCCAAGGATGTAACTGAATTGATTGGTAACACTCCT
TTGGTATACCTGAATAATGTTGTGGATGGGTGTGTTGCACGTGTTGCTGCCAAGCTGGAA
AGCATGGAGCCATGCTCTAGTGTTAAGGATAGGATCGGTTATAGTATGATTACAGATGCT
GAGGAGAAGGGTCTCATCAAACCCGGCGAGAGTGTCCTCATCGAACCTACGAGTGGAAAC
ACCGGTGTAGGATTGGCATTCATGGCTGCTGCTAAAGGCTACAAACTCATTATTACGATG
CCTTCTTCAATGAGTCTTGAGAGAAGAATTATTCTGCGTGCTTTCGGTGCTGAGTTGGTG
CTTACCGATCCAGCAAAAGGGATGAAGGGTGCTATTTCAAAGGCTGAAGAGATAAAGGCC
AAAACACCCAACTCCTATATTCTTCAGCAATTTGAAAACCCTGCTAACCCAAAGATACAC
TATGAGACCACTGGTCCTGAGATCTGGAAAGGCTCAAACGGGAAAGTGGATGCTCTAGTC
TCTGGAATTGGAACAGGAGGCACGATAACTGGTTCAGGCAAGTATTTGAGAGAGCAGAAC
CCCAACGTTAAGCTGTATGGCGTGGAACCAGTTGAAAGTGCTATCCTTTCTGGTGGAAAG
CCTGGTCCACATAAGATTCAGGGGATTGGTGCTGGTTTCATTCCTGGTGTTTTGGAAGTT
AACCTTATTGATGATGTAGTTCAGGTTTCAAGTGAAGAATCCATAGAAATGGCTAAGCTT
CTGGCATTGAAGGAAGGATTGCTAGTAAGTTTGACTGTTTTAACTGTGCTCCCCCTTCCC
CCTTGCAGCTTTCACAAAAAAAGAAAAAAGAAATAA