Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082108
CDS Infomation

pacid=37458329 polypeptide=PGSC0003DMP400055470 locus=PGSC0003DMG400032262 ID=PGSC0003DMT400082108.v4.03 annot-version=v4.03
Sequence

ATGTCATCCTACGAGGAACCTGTGGTGGTTGACAGTTCTGCTGAATGTAATGGAGATACA
CCTAGTACCAATAAAAATGGACTTCACCTTTATCCTGTTTCTGCCAATGATTCAGGCGAA
GGTTTACCATATGCTCCTGCAGATTGGCCAAACCCAGGTGATAAATGGGCCTGGAAGGTG
GGGAAAAGAATTGCATCTGCTGGCTACTTTCTTGATAGATATCTGTATCTTCCAAACCGT
CTTCGTGGAAAGCGAAGTGTTTTCGCAAGTAGGCTTTCGGTTGAACAATATGTCAGGTCT
GAGTTTCCAAGCACAGATATCAATGAATTCTTTGCCTCATTTAGTTGGAAGATTCCCTCA
AAACTATTAAAAGGTGACTGGTATGCTGAGCTCACATCTTCAGGCATGAAATCTGATTCT
CACTTAGGAACCATTAGTTGTAAGGCTGGTAATAGCTTGTGTGCGAGTGCGAGTTTAATA
GAAGCAGGGAATCCTAGTCCAGAGACAATGTTTTGTGACATTTGTTGCAGTGAGCCTGGT
TTTTGCCGAGATTGTTGTTGTATTCTTTGTTGTAAAACTATTAGTTCTGCTTATGGTGGG
TATAGTTACATTAGGTGCGAAGCAACAGCTGATGGTGGTTACATTTGCGGACACATAGCC
CATATAGACTGTGCTCTACGAGCTTATATGGCTGGGACAGTTGGAGGAAGCATTGGTCTG
GATGCGGAGTATTGTTGTCGGCGCTGTGATTCAAGAACTGAATTGGTCTCACATGTCATG
AAGCTTCTAAAAATTTGTGGATCAATTGATTCTCGTGATGACATCGAGAAGATTTTGAAT
GTTGGCTTTTGCATTCTACGTGGCTCACGGAAAACAAATTCAAAACAGTTGGTGCGTCAC
ATTAAATCGGCCATGGCAAAGCTTCAGAAGGGTGCCTGCATTGGAGATGTGTTCAAAGAA
GTAGAATTCATGGACGCCAATGGAGGAACGCTTCATCATGGAGAGTCAATTCTTCGCGAA
AGATCTTCACCACCAAAGATGACTTCAAATTTTGACCATCGAGTTGAATCCCTTAAGCTT
GAGGATGAAATTGATCAAACTCTGCAGGCATTGAGGAAGTCACAAAACTTTGAGTACAGA
CTTGCTGAGGAAAGACTCCTTGTTCAAAAGAACTACATCATGAATCTATATGAACAGCTT
GACAAGGAAAGATCTGATCTATCAAGCCATACAACGATGGTTGAAACAGATACCTTAGTT
GATGCTGTTCTACAAAGAGTAGACCAAATAAAGCGAGAAGTATTGAAACTCAAGGACATG
AAACAGGTACAAAATGGATTTGGAAGTACTTCTAAGACAATACTCAAGGACTACTTTGGT
CTAGAAGCAGAATCTTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055470
PEP Infomation

pacid=37458329 transcript=PGSC0003DMT400082108 locus=PGSC0003DMG400032262 ID=PGSC0003DMT400082108.v4.03 annot-version=v4.03
Sequence

MSSYEEPVVVDSSAECNGDTPSTNKNGLHLYPVSANDSGEGLPYAPADWPNPGDKWAWKV
GKRIASAGYFLDRYLYLPNRLRGKRSVFASRLSVEQYVRSEFPSTDINEFFASFSWKIPS
KLLKGDWYAELTSSGMKSDSHLGTISCKAGNSLCASASLIEAGNPSPETMFCDICCSEPG
FCRDCCCILCCKTISSAYGGYSYIRCEATADGGYICGHIAHIDCALRAYMAGTVGGSIGL
DAEYCCRRCDSRTELVSHVMKLLKICGSIDSRDDIEKILNVGFCILRGSRKTNSKQLVRH
IKSAMAKLQKGACIGDVFKEVEFMDANGGTLHHGESILRERSSPPKMTSNFDHRVESLKL
EDEIDQTLQALRKSQNFEYRLAEERLLVQKNYIMNLYEQLDKERSDLSSHTTMVETDTLV
DAVLQRVDQIKREVLKLKDMKQVQNGFGSTSKTILKDYFGLEAESS*

Transcript Sequence

Transcript ID

PGSC0003DMT400082108
Transcript Infomation

pacid=37458329 locus=PGSC0003DMG400032262 ID=PGSC0003DMT400082108.v4.03 annot-version=v4.03
Sequence

ATGTCATCCTACGAGGAACCTGTGGTGGTTGACAGTTCTGCTGAATGTAATGGAGATACA
CCTAGTACCAATAAAAATGGACTTCACCTTTATCCTGTTTCTGCCAATGATTCAGGCGAA
GGTTTACCATATGCTCCTGCAGATTGGCCAAACCCAGGTGATAAATGGGCCTGGAAGGTG
GGGAAAAGAATTGCATCTGCTGGCTACTTTCTTGATAGATATCTGTATCTTCCAAACCGT
CTTCGTGGAAAGCGAAGTGTTTTCGCAAGTAGGCTTTCGGTTGAACAATATGTCAGGTCT
GAGTTTCCAAGCACAGATATCAATGAATTCTTTGCCTCATTTAGTTGGAAGATTCCCTCA
AAACTATTAAAAGGTGACTGGTATGCTGAGCTCACATCTTCAGGCATGAAATCTGATTCT
CACTTAGGAACCATTAGTTGTAAGGCTGGTAATAGCTTGTGTGCGAGTGCGAGTTTAATA
GAAGCAGGGAATCCTAGTCCAGAGACAATGTTTTGTGACATTTGTTGCAGTGAGCCTGGT
TTTTGCCGAGATTGTTGTTGTATTCTTTGTTGTAAAACTATTAGTTCTGCTTATGGTGGG
TATAGTTACATTAGGTGCGAAGCAACAGCTGATGGTGGTTACATTTGCGGACACATAGCC
CATATAGACTGTGCTCTACGAGCTTATATGGCTGGGACAGTTGGAGGAAGCATTGGTCTG
GATGCGGAGTATTGTTGTCGGCGCTGTGATTCAAGAACTGAATTGGTCTCACATGTCATG
AAGCTTCTAAAAATTTGTGGATCAATTGATTCTCGTGATGACATCGAGAAGATTTTGAAT
GTTGGCTTTTGCATTCTACGTGGCTCACGGAAAACAAATTCAAAACAGTTGGTGCGTCAC
ATTAAATCGGCCATGGCAAAGCTTCAGAAGGGTGCCTGCATTGGAGATGTGTTCAAAGAA
GTAGAATTCATGGACGCCAATGGAGGAACGCTTCATCATGGAGAGTCAATTCTTCGCGAA
AGATCTTCACCACCAAAGATGACTTCAAATTTTGACCATCGAGTTGAATCCCTTAAGCTT
GAGGATGAAATTGATCAAACTCTGCAGGCATTGAGGAAGTCACAAAACTTTGAGTACAGA
CTTGCTGAGGAAAGACTCCTTGTTCAAAAGAACTACATCATGAATCTATATGAACAGCTT
GACAAGGAAAGATCTGATCTATCAAGCCATACAACGATGGTTGAAACAGATACCTTAGTT
GATGCTGTTCTACAAAGAGTAGACCAAATAAAGCGAGAAGTATTGAAACTCAAGGACATG
AAACAGGTACAAAATGGATTTGGAAGTACTTCTAAGACAATACTCAAGGACTACTTTGGT
CTAGAAGCAGAATCTTCTTAA