Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082098
CDS Infomation

pacid=37455398 polypeptide=PGSC0003DMP400055463 locus=PGSC0003DMG400032257 ID=PGSC0003DMT400082098.v4.03 annot-version=v4.03
Sequence

ATGTCTAAAAAAGAAGGGGAAGATGAGAAAGTGAGTTTAGAGAGTGAAAATGTAGAGGTA
AAGAGTGAAGAGGTAGAAGTAGAAGGTAGAAAGAGTGAGGTGAATGTAAAAGGGGAAGAA
GGGGGAGGAGGAGGAGGAGTTGTGGTGGTGATGGATACTCCAGAGAGGAACAAGAGCCAG
ATCGCAACACCCATTTCCAAATTTGAGGAGTCCCCTTTTTCTAATTTCCTTAACAACCTT
TCCCCCATCAAACCAGTTAAGGCCGCACATTTTCCCCAGACACTCAATACCCTTAGTTTT
GGATCTATACCGTCTGTGTTCACCTCACCCCATGTCAGCTCCGCAAGGGAATCCAGATTT
CTAAGAAGGCACCTGCTCTCAGATCCATCAAAACCAGAATTTGCTTCTGATAACAGTGTT
AAAGTTGATAATGATGAAGCTATGCCAGATGCTGTTAATAGCTCAAATGAGCCCAAGGAA
AGTTTTGGTTCTCAGAATTCTATGGTTGAAGCATCCAATGAATGCTCAAAGCTTGCCGTT
GAGCGAACTCTAAATTATGAGTGCAATGATAGTCCCAGTACTTTACCTACTGGGAGCTTT
AGAGGTAAGAGTTTGTCAGAATTTGCAGGCAGTTCTGTGACATATGTCCCTTTGGTACAA
GGCATGTCTGGAAAAGGTTTGCTTAGATGTGAAGTTAATACGGAGGGGAAAAATGAACTT
GATCCAAATAAAGAAGCTCCAGGATGTGATTGGGAGAATTTGATTTGTGATGCTACGGAT
CTACTGATCTTTGACTCACCTGGTGACCCTGAGGCTTTCACTAAAGCAGCAGGTCCTAAT
TTGAGGCACTTTGGATTTGCCTCAAATGAAATGCAGAACATGCAAGTTTTTGGTCAGGCT
AGTACCAGCGAATGTGGTGGAGATGGAAGTGAAACAGAGAAACCGTCTACTCAACCTGGG
GACGAAACCCAAGTCAATGAATATGCTGAGAACCAAAACATGAAACCTGATTCTTCTCTA
ACAAATGACGGCATGGGTGTGGGTCAAAGTGAAAGAACTGATAATGAGATGGTCTCTACT
CTATACCGTGGAATGAGAAGACGTTGTCTAGTTTTTGAGATGGTGGGATCTCGAAGAAAG
CATGTAGATGAGGGTTCTGGCTCTTCTGCTGTGCAAGACACTGATGGAAACCTTGCCTGC
AACGAGAAGCAACTAGTACCTTATAAGGCGGTCAATGAATCTTCGCGATGCATTTTACCT
GGAATTGGCTTGCATTTAAATGCCCTTGCAGCATCTTCAAAAGATGGTAAAGTAGTCAAG
CATGAAACTAATGCTTCTGGGAAACAGCTTTTAATTACGTCTGGCTCAGCTGTCAGTCTT
CATCCTTTAGTTGCTGGTCAAGAATCAATGAGTAAATCACAGCCTGAAACCTCTAGAGAA
ATTGTACCTTTTGAGAATAGTGTACCTCTTATGGAGGATGCTAGCCTGGCACCTGGATAT
GTAAATAATGAAGAGCTTAGTCAGACTAGTCCAAAGAAAAAGAGACGTCGATTGGAACCT
GGGGAAGGTGAGGCATGCAAGCGCTGTAATTGTAAGAAATCAAAATGCTTGAAACTTTAC
TGTGAATGTTTTGCCGCTGGAGTCTACTGTGTGGAGCCATGTGCATGTCAAGACTGCTTC
AACAAGCCTATTCATGAAGATACTGTCCTTGCAACTCGCAAACAGATCGAATCAAGAAAC
CCTCTTGCTTTTGCTCCTAAAGTGATAAGGAACGCCGACACTATTTCTGAAACAGGGGAT
GATTCCAGCAAGACTCCTGCCTCAGCTCGTCACAAGAGAGGATGCAACTGCAAGAAATCC
GGCTGTCTGAAGAAATATTGTGAATGCTATCAGGGAGGGGTTGGATGCTCCATCAATTGC
AGATGTGAAGGATGCAAGAATGCGTTCGGCAGAAAGGATGGTTCTATTTTCATAGGCACA
GATGGGGATGCTGAGGAAGAGGAAACAGATGCGTATGAAAAGAGTACTGTCGATAGAGCT
TTTCACAAAAACCTATTACATAGTGATGTAGAGCTGAATCCAGATTCCACCGTCCCTGCT
ACACCTTTAGCATTTAGAAGACCACCAATGCAGCTCCCTTTCTCGTTGAAGAACAAACCA
CCTCGATCATCATTTCTATCTATCGGATCCTCATCTGGTATATTTGCTGGTCAAGGGGTC
GGAAGGCCAGACTTCTTTCAACCTCAGCCTCAGCCCAAGTTCGAGAAACCATTTGAGTCA
ATTCAAGAAGATGAAATGCCTGAGATACTCCAACAAGGGGGGACTAGCTCTCCAATCAGT
GGCATTAAGACAGCTTCTCCCAACAGGAAGAGAGTTTCTCCTCCTCATTGTGACTTTGCG
AATTCGCCCGGTCGTCGAAGCAGTCGCAAGTTGATACTGCAATCCATTCCTTCATTTCCT
TCCCTCACTCCCAATCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055463
PEP Infomation

pacid=37455398 transcript=PGSC0003DMT400082098 locus=PGSC0003DMG400032257 ID=PGSC0003DMT400082098.v4.03 annot-version=v4.03
Sequence

MSKKEGEDEKVSLESENVEVKSEEVEVEGRKSEVNVKGEEGGGGGGVVVVMDTPERNKSQ
IATPISKFEESPFSNFLNNLSPIKPVKAAHFPQTLNTLSFGSIPSVFTSPHVSSARESRF
LRRHLLSDPSKPEFASDNSVKVDNDEAMPDAVNSSNEPKESFGSQNSMVEASNECSKLAV
ERTLNYECNDSPSTLPTGSFRGKSLSEFAGSSVTYVPLVQGMSGKGLLRCEVNTEGKNEL
DPNKEAPGCDWENLICDATDLLIFDSPGDPEAFTKAAGPNLRHFGFASNEMQNMQVFGQA
STSECGGDGSETEKPSTQPGDETQVNEYAENQNMKPDSSLTNDGMGVGQSERTDNEMVST
LYRGMRRRCLVFEMVGSRRKHVDEGSGSSAVQDTDGNLACNEKQLVPYKAVNESSRCILP
GIGLHLNALAASSKDGKVVKHETNASGKQLLITSGSAVSLHPLVAGQESMSKSQPETSRE
IVPFENSVPLMEDASLAPGYVNNEELSQTSPKKKRRRLEPGEGEACKRCNCKKSKCLKLY
CECFAAGVYCVEPCACQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRNADTISETGD
DSSKTPASARHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSIFIGT
DGDAEEEETDAYEKSTVDRAFHKNLLHSDVELNPDSTVPATPLAFRRPPMQLPFSLKNKP
PRSSFLSIGSSSGIFAGQGVGRPDFFQPQPQPKFEKPFESIQEDEMPEILQQGGTSSPIS
GIKTASPNRKRVSPPHCDFANSPGRRSSRKLILQSIPSFPSLTPNP*

Transcript Sequence

Transcript ID

PGSC0003DMT400082098
Transcript Infomation

pacid=37455398 locus=PGSC0003DMG400032257 ID=PGSC0003DMT400082098.v4.03 annot-version=v4.03
Sequence

ATGTCTAAAAAAGAAGGGGAAGATGAGAAAGTGAGTTTAGAGAGTGAAAATGTAGAGGTA
AAGAGTGAAGAGGTAGAAGTAGAAGGTAGAAAGAGTGAGGTGAATGTAAAAGGGGAAGAA
GGGGGAGGAGGAGGAGGAGTTGTGGTGGTGATGGATACTCCAGAGAGGAACAAGAGCCAG
ATCGCAACACCCATTTCCAAATTTGAGGAGTCCCCTTTTTCTAATTTCCTTAACAACCTT
TCCCCCATCAAACCAGTTAAGGCCGCACATTTTCCCCAGACACTCAATACCCTTAGTTTT
GGATCTATACCGTCTGTGTTCACCTCACCCCATGTCAGCTCCGCAAGGGAATCCAGATTT
CTAAGAAGGCACCTGCTCTCAGATCCATCAAAACCAGAATTTGCTTCTGATAACAGTGTT
AAAGTTGATAATGATGAAGCTATGCCAGATGCTGTTAATAGCTCAAATGAGCCCAAGGAA
AGTTTTGGTTCTCAGAATTCTATGGTTGAAGCATCCAATGAATGCTCAAAGCTTGCCGTT
GAGCGAACTCTAAATTATGAGTGCAATGATAGTCCCAGTACTTTACCTACTGGGAGCTTT
AGAGGTAAGAGTTTGTCAGAATTTGCAGGCAGTTCTGTGACATATGTCCCTTTGGTACAA
GGCATGTCTGGAAAAGGTTTGCTTAGATGTGAAGTTAATACGGAGGGGAAAAATGAACTT
GATCCAAATAAAGAAGCTCCAGGATGTGATTGGGAGAATTTGATTTGTGATGCTACGGAT
CTACTGATCTTTGACTCACCTGGTGACCCTGAGGCTTTCACTAAAGCAGCAGGTCCTAAT
TTGAGGCACTTTGGATTTGCCTCAAATGAAATGCAGAACATGCAAGTTTTTGGTCAGGCT
AGTACCAGCGAATGTGGTGGAGATGGAAGTGAAACAGAGAAACCGTCTACTCAACCTGGG
GACGAAACCCAAGTCAATGAATATGCTGAGAACCAAAACATGAAACCTGATTCTTCTCTA
ACAAATGACGGCATGGGTGTGGGTCAAAGTGAAAGAACTGATAATGAGATGGTCTCTACT
CTATACCGTGGAATGAGAAGACGTTGTCTAGTTTTTGAGATGGTGGGATCTCGAAGAAAG
CATGTAGATGAGGGTTCTGGCTCTTCTGCTGTGCAAGACACTGATGGAAACCTTGCCTGC
AACGAGAAGCAACTAGTACCTTATAAGGCGGTCAATGAATCTTCGCGATGCATTTTACCT
GGAATTGGCTTGCATTTAAATGCCCTTGCAGCATCTTCAAAAGATGGTAAAGTAGTCAAG
CATGAAACTAATGCTTCTGGGAAACAGCTTTTAATTACGTCTGGCTCAGCTGTCAGTCTT
CATCCTTTAGTTGCTGGTCAAGAATCAATGAGTAAATCACAGCCTGAAACCTCTAGAGAA
ATTGTACCTTTTGAGAATAGTGTACCTCTTATGGAGGATGCTAGCCTGGCACCTGGATAT
GTAAATAATGAAGAGCTTAGTCAGACTAGTCCAAAGAAAAAGAGACGTCGATTGGAACCT
GGGGAAGGTGAGGCATGCAAGCGCTGTAATTGTAAGAAATCAAAATGCTTGAAACTTTAC
TGTGAATGTTTTGCCGCTGGAGTCTACTGTGTGGAGCCATGTGCATGTCAAGACTGCTTC
AACAAGCCTATTCATGAAGATACTGTCCTTGCAACTCGCAAACAGATCGAATCAAGAAAC
CCTCTTGCTTTTGCTCCTAAAGTGATAAGGAACGCCGACACTATTTCTGAAACAGGGGAT
GATTCCAGCAAGACTCCTGCCTCAGCTCGTCACAAGAGAGGATGCAACTGCAAGAAATCC
GGCTGTCTGAAGAAATATTGTGAATGCTATCAGGGAGGGGTTGGATGCTCCATCAATTGC
AGATGTGAAGGATGCAAGAATGCGTTCGGCAGAAAGGATGGTTCTATTTTCATAGGCACA
GATGGGGATGCTGAGGAAGAGGAAACAGATGCGTATGAAAAGAGTACTGTCGATAGAGCT
TTTCACAAAAACCTATTACATAGTGATGTAGAGCTGAATCCAGATTCCACCGTCCCTGCT
ACACCTTTAGCATTTAGAAGACCACCAATGCAGCTCCCTTTCTCGTTGAAGAACAAACCA
CCTCGATCATCATTTCTATCTATCGGATCCTCATCTGGTATATTTGCTGGTCAAGGGGTC
GGAAGGCCAGACTTCTTTCAACCTCAGCCTCAGCCCAAGTTCGAGAAACCATTTGAGTCA
ATTCAAGAAGATGAAATGCCTGAGATACTCCAACAAGGGGGGACTAGCTCTCCAATCAGT
GGCATTAAGACAGCTTCTCCCAACAGGAAGAGAGTTTCTCCTCCTCATTGTGACTTTGCG
AATTCGCCCGGTCGTCGAAGCAGTCGCAAGTTGATACTGCAATCCATTCCTTCATTTCCT
TCCCTCACTCCCAATCCTTGA