Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082082
CDS Infomation

pacid=37456725 polypeptide=PGSC0003DMP400055451 locus=PGSC0003DMG400032251 ID=PGSC0003DMT400082082.v4.03 annot-version=v4.03
Sequence

ATGGCAGATTATAATTCTTTACCATCTCCAATGGAGAATTCAAGAAAAACCTCTTCTTTT
TTTGGTTCACCAAGGTTGTTTACTTGTTTTTCTGCTAAGGGGTTTCCTGATACTGAGTCT
ATTATGAGTCCAACTTCAATTCTTGATAGTAAGCCTTTCACTGTTTTGAGAAACCCCTTT
TGGTCTGATCCAAAATCTCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGACTCA
AAAGGGGTTGGTCTTGGTCTTGTTGATGCTCTGATTGATGAAAAATCTGATTCTAAAGAA
ATGAATTCTATTAGTAGAATGGTTGTTCTTGGTTCACAGTTGAAGATTCAGATCCCTACA
TTGCCTCCTTCTTTTAATTACCCTACTGATTCACCACCTTCACCTGGTGATTTTGGTATC
AAGACTAGAAATTCTCAGTTAGGTTCTTTCTCTCCTGGCTTTTCACCATCTCCTGTGAAG
AAATCTCCATTTGGTTCCTCAAATTCTAACATAGATATCCCAAATTCACCTGGGGCTTTT
AGTAGTCTCTCTGCTGCTGAAATGGAGCTTTCTGAGGAGTATACTTGTGTAATTTCATAT
GGTCCAAATCCAAGAACAACTCATATATTTGATGATTGTATTCTTGAAAGCTGTTGTGGT
GTTGTTAAGTACTCTGCATCAAGAAAAGAAAATGAAACTTTTCCTAATCCTCCAATGAGC
TATCCATCTGAGAGTTTTCTCAGCTTCTGTCACAATTGCAAGAAGAATCTTGGAATAGGG
AAAGACATTTACATGTACAGAGGTGAGAAGGCATTTTGCAGCAGTGATTGCAGATACAAA
GAAATGATGTTGGAAGAAGGAATGGATAAATCAGAGACTGATGATAATGTATTTGGTATT
ATTTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055451
PEP Infomation

pacid=37456725 transcript=PGSC0003DMT400082082 locus=PGSC0003DMG400032251 ID=PGSC0003DMT400082082.v4.03 annot-version=v4.03
Sequence

MADYNSLPSPMENSRKTSSFFGSPRLFTCFSAKGFPDTESIMSPTSILDSKPFTVLRNPF
WSDPKSPKPESRVHFQKLDSKGVGLGLVDALIDEKSDSKEMNSISRMVVLGSQLKIQIPT
LPPSFNYPTDSPPSPGDFGIKTRNSQLGSFSPGFSPSPVKKSPFGSSNSNIDIPNSPGAF
SSLSAAEMELSEEYTCVISYGPNPRTTHIFDDCILESCCGVVKYSASRKENETFPNPPMS
YPSESFLSFCHNCKKNLGIGKDIYMYRGEKAFCSSDCRYKEMMLEEGMDKSETDDNVFGI
IS*

Transcript Sequence

Transcript ID

PGSC0003DMT400082082
Transcript Infomation

pacid=37456725 locus=PGSC0003DMG400032251 ID=PGSC0003DMT400082082.v4.03 annot-version=v4.03
Sequence

ATGGCAGATTATAATTCTTTACCATCTCCAATGGAGAATTCAAGAAAAACCTCTTCTTTT
TTTGGTTCACCAAGGTTGTTTACTTGTTTTTCTGCTAAGGGGTTTCCTGATACTGAGTCT
ATTATGAGTCCAACTTCAATTCTTGATAGTAAGCCTTTCACTGTTTTGAGAAACCCCTTT
TGGTCTGATCCAAAATCTCCTAAACCAGAAAGTAGAGTTCATTTTCAGAAACTTGACTCA
AAAGGGGTTGGTCTTGGTCTTGTTGATGCTCTGATTGATGAAAAATCTGATTCTAAAGAA
ATGAATTCTATTAGTAGAATGGTTGTTCTTGGTTCACAGTTGAAGATTCAGATCCCTACA
TTGCCTCCTTCTTTTAATTACCCTACTGATTCACCACCTTCACCTGGTGATTTTGGTATC
AAGACTAGAAATTCTCAGTTAGGTTCTTTCTCTCCTGGCTTTTCACCATCTCCTGTGAAG
AAATCTCCATTTGGTTCCTCAAATTCTAACATAGATATCCCAAATTCACCTGGGGCTTTT
AGTAGTCTCTCTGCTGCTGAAATGGAGCTTTCTGAGGAGTATACTTGTGTAATTTCATAT
GGTCCAAATCCAAGAACAACTCATATATTTGATGATTGTATTCTTGAAAGCTGTTGTGGT
GTTGTTAAGTACTCTGCATCAAGAAAAGAAAATGAAACTTTTCCTAATCCTCCAATGAGC
TATCCATCTGAGAGTTTTCTCAGCTTCTGTCACAATTGCAAGAAGAATCTTGGAATAGGG
AAAGACATTTACATGTACAGAGGTGAGAAGGCATTTTGCAGCAGTGATTGCAGATACAAA
GAAATGATGTTGGAAGAAGGAATGGATAAATCAGAGACTGATGATAATGTATTTGGTATT
ATTTCCTAA