Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082074
CDS Infomation

pacid=37457221 polypeptide=PGSC0003DMP400055445 locus=PGSC0003DMG400032247 ID=PGSC0003DMT400082074.v4.03 annot-version=v4.03
Sequence

ATGGCAATTTTCACAAAACCAAAGCTTTTATTTGTCTTCTTCTTGATCCTCTCTTTGGTC
CTTGTATCTCAATGCTATGATCAAAACCCTAGGGGTGATCAAGACCCGCAGCAGGAGAAA
CTCAGAGAGTGTCAACAACGTTGTGAGAGACAACAACCAGGACAACAGAGACAGTTGTGT
AAACAACGTTGTGAACAGCAGTATAAGAAAGAGCAACAACAACAACATGAAAGGGAGACT
GGTGAAGATGATCTAGGCAATCGTGGACCTGAGAAGAGATACAGAAAATTCCAAGAGTGC
CAACGTAGGTGCCAGAGTGAAGAACAGGGCCAACAACTTCAAGAGTGTCAACAACGTTGT
CAACAAGAGTACCAAAGAGAGAAAGGACAACAAGTTGAAACTAACCCAGAGTGGGAACAA
CAAGAAAAATCGAATAATCCCTACTTATTCGAGTCTCAAAGGTTCAGGTCTCGATACAGA
GCTAGTCATGGTGATTTCCGTATCCTCGAGAAATTCAATCAAAGATCTCAACTTCTAAAA
GGAATCGAAAAATACCGTGTCTCCGTCCTTGAATTGGAGCCTCAGTCTTTCGTGTTGCCT
CATCACTGTGATGGTGAAGCCATATTTGTTGTTGTTAAAGGACAAGGAATAATTAGTATA
GCGGAACAAGATAACAAAAACTCCTTCAACTTGCAGAAGGGGGATGTAATCAGGGTGTTT
GCTGGTTCAAATGTCTACATGCTCAACAAAGATAACAACGAAAAGTTATTTGTTTACGTG
CTCGCCAAGTCCGTCAATGCCCCTGGAAATTTGCAGCAATACTTTAGTGCCGGAGGTCAA
AATCCGGAGACCTTCTACAAAGCATTCAGCAGCGATATCCTGGAGAGTGCTTTCAATAAC
CCAAGGGACAAGTTAGAGAGGCTATTTGGACAACACAAGGAGGGGATAATAATCAAAGCC
AGTGAAGAGCAAATTAGAGCTATAAGCGAACACGCCTCACGCTCCACTCAGCAAACTAAA
GGTAGAACACAAGGACCTTTCAATTTGCTGAAGGAACGCCCATTATTCGAAAGCAAATTT
GGACAGTTCTTTGAAGCATGTCCCGAAAGATTCGAGCAGTTGAGGGACTTGGATGCTGCT
GTTGGTTTCATGAACATTAACCAAGGTGGAATGGTACTACCATACTACAACACAAAATCT
ACAAAGTTGGTTATGGTTGTAGAAGGAAACGCTCGGTTTGAAATGGCATGTCCTCATCTT
GGTAGACAAGGCCAAAGCCCATGGTCTCGTGGACAAGGAAGAGAGCATGAGCAAGAACAA
GAACAAGAAGAAGGAGAAGTTCATTATCAGAAAATCCGCGGTAATCTAAACGTTGGTGAT
GTTTTGGTAATCCCAGCAGGCCATCCGATCACCTTTGTTGCAACCGGAAACTCAAATGTG
AGGATAGTTGGTTTCGGAGTCGATGCTCAGAACAGCAAAAAGAACTTCCTTGCAGGTAAA
CAAAGCATATGGAGAAACGTAGATAGGGAAGCGAAAGAACTATCCTTCAGCATGCCCGGA
AGGGAGGTAGAAGAGATATTGCAGAAGCAAGACCAGTCCTACTTTGTGGCAGGACCGGAG
CATCGCCAGCAGAGGGAGAGGGGTGAAGAAGGAAGGAGGGGACAAGATCAATATTTGTCT
TCAATTTTGGACTTTGTTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055445
PEP Infomation

pacid=37457221 transcript=PGSC0003DMT400082074 locus=PGSC0003DMG400032247 ID=PGSC0003DMT400082074.v4.03 annot-version=v4.03
Sequence

MAIFTKPKLLFVFFLILSLVLVSQCYDQNPRGDQDPQQEKLRECQQRCERQQPGQQRQLC
KQRCEQQYKKEQQQQHERETGEDDLGNRGPEKRYRKFQECQRRCQSEEQGQQLQECQQRC
QQEYQREKGQQVETNPEWEQQEKSNNPYLFESQRFRSRYRASHGDFRILEKFNQRSQLLK
GIEKYRVSVLELEPQSFVLPHHCDGEAIFVVVKGQGIISIAEQDNKNSFNLQKGDVIRVF
AGSNVYMLNKDNNEKLFVYVLAKSVNAPGNLQQYFSAGGQNPETFYKAFSSDILESAFNN
PRDKLERLFGQHKEGIIIKASEEQIRAISEHASRSTQQTKGRTQGPFNLLKERPLFESKF
GQFFEACPERFEQLRDLDAAVGFMNINQGGMVLPYYNTKSTKLVMVVEGNARFEMACPHL
GRQGQSPWSRGQGREHEQEQEQEEGEVHYQKIRGNLNVGDVLVIPAGHPITFVATGNSNV
RIVGFGVDAQNSKKNFLAGKQSIWRNVDREAKELSFSMPGREVEEILQKQDQSYFVAGPE
HRQQRERGEEGRRGQDQYLSSILDFVF*

Transcript Sequence

Transcript ID

PGSC0003DMT400082074
Transcript Infomation

pacid=37457221 locus=PGSC0003DMG400032247 ID=PGSC0003DMT400082074.v4.03 annot-version=v4.03
Sequence

ATGGCAATTTTCACAAAACCAAAGCTTTTATTTGTCTTCTTCTTGATCCTCTCTTTGGTC
CTTGTATCTCAATGCTATGATCAAAACCCTAGGGGTGATCAAGACCCGCAGCAGGAGAAA
CTCAGAGAGTGTCAACAACGTTGTGAGAGACAACAACCAGGACAACAGAGACAGTTGTGT
AAACAACGTTGTGAACAGCAGTATAAGAAAGAGCAACAACAACAACATGAAAGGGAGACT
GGTGAAGATGATCTAGGCAATCGTGGACCTGAGAAGAGATACAGAAAATTCCAAGAGTGC
CAACGTAGGTGCCAGAGTGAAGAACAGGGCCAACAACTTCAAGAGTGTCAACAACGTTGT
CAACAAGAGTACCAAAGAGAGAAAGGACAACAAGTTGAAACTAACCCAGAGTGGGAACAA
CAAGAAAAATCGAATAATCCCTACTTATTCGAGTCTCAAAGGTTCAGGTCTCGATACAGA
GCTAGTCATGGTGATTTCCGTATCCTCGAGAAATTCAATCAAAGATCTCAACTTCTAAAA
GGAATCGAAAAATACCGTGTCTCCGTCCTTGAATTGGAGCCTCAGTCTTTCGTGTTGCCT
CATCACTGTGATGGTGAAGCCATATTTGTTGTTGTTAAAGGACAAGGAATAATTAGTATA
GCGGAACAAGATAACAAAAACTCCTTCAACTTGCAGAAGGGGGATGTAATCAGGGTGTTT
GCTGGTTCAAATGTCTACATGCTCAACAAAGATAACAACGAAAAGTTATTTGTTTACGTG
CTCGCCAAGTCCGTCAATGCCCCTGGAAATTTGCAGCAATACTTTAGTGCCGGAGGTCAA
AATCCGGAGACCTTCTACAAAGCATTCAGCAGCGATATCCTGGAGAGTGCTTTCAATAAC
CCAAGGGACAAGTTAGAGAGGCTATTTGGACAACACAAGGAGGGGATAATAATCAAAGCC
AGTGAAGAGCAAATTAGAGCTATAAGCGAACACGCCTCACGCTCCACTCAGCAAACTAAA
GGTAGAACACAAGGACCTTTCAATTTGCTGAAGGAACGCCCATTATTCGAAAGCAAATTT
GGACAGTTCTTTGAAGCATGTCCCGAAAGATTCGAGCAGTTGAGGGACTTGGATGCTGCT
GTTGGTTTCATGAACATTAACCAAGGTGGAATGGTACTACCATACTACAACACAAAATCT
ACAAAGTTGGTTATGGTTGTAGAAGGAAACGCTCGGTTTGAAATGGCATGTCCTCATCTT
GGTAGACAAGGCCAAAGCCCATGGTCTCGTGGACAAGGAAGAGAGCATGAGCAAGAACAA
GAACAAGAAGAAGGAGAAGTTCATTATCAGAAAATCCGCGGTAATCTAAACGTTGGTGAT
GTTTTGGTAATCCCAGCAGGCCATCCGATCACCTTTGTTGCAACCGGAAACTCAAATGTG
AGGATAGTTGGTTTCGGAGTCGATGCTCAGAACAGCAAAAAGAACTTCCTTGCAGGTAAA
CAAAGCATATGGAGAAACGTAGATAGGGAAGCGAAAGAACTATCCTTCAGCATGCCCGGA
AGGGAGGTAGAAGAGATATTGCAGAAGCAAGACCAGTCCTACTTTGTGGCAGGACCGGAG
CATCGCCAGCAGAGGGAGAGGGGTGAAGAAGGAAGGAGGGGACAAGATCAATATTTGTCT
TCAATTTTGGACTTTGTTTTCTAA