Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082073
CDS Infomation

pacid=37458643 polypeptide=PGSC0003DMP400055444 locus=PGSC0003DMG400032246 ID=PGSC0003DMT400082073.v4.03 annot-version=v4.03
Sequence

ATGAGAGATGAAAATTCCAAAAAGAGCAAGCTCTCCTGGCCAAAGAAACTTGTCAGAAAA
TGGTTCAATATTAAGGGAAAAACTGAAGAATTCCAGTCTGATGAAGTTGTTTATGGAGGT
GGCGATGAGTGGAGAACGAGCATCTCGGAGAGGGAGCATTGCACGATTAAGAAAACTAAA
ACAGAAAAATCAAATTCTTCTCGGAGTATGGAGCGTCCCCGACGAGGAAGAGCTGATCTT
GATCACCCTCAGATTATAAATGTACACAACTACAGCGTTTTCGTTGCTACATGGAACGTG
GGTGGAAAATCACCATCAAGTAATTTGAATCTAGATGACTGGCTTCATTCAGCACCACCT
GCAGATATCTATGTACTTGGATTTCAAGAAATAGTTCCTCTAAATGCTGGTAACATCCTT
GGAGCTGAAGACAATGGACCTGCAAAAAAATGGCTATCTTTGATCCGAAAGACACTTAAT
AATGGTCCTGGTAGTAGTGGAGGTAGTAGTGGCTGTTATACTCCTTCTCCTGTCCCAGAT
CCAATTGCTGAATGGAATGCTGATTTCGAGGGGTCAGGTAGACGCAAGGCATCCTTATTT
CCTCGTCGGTCATTCCAGACTCCCCAATGTTGGAGAATGGAAAATGATCCATCCATCTCA
CAACCTCGCCTTGATAGACGATACAGTGTGTGTGATAGAGTAATTTCTGGACACAGACAG
AGTGATTTTGATCCAAACATAAGATGGGGGCACAGGCCTAGTGACTATGGTCACAGGCCT
AGTGACTATTCTTCTGGTTACCGGCCAAGTGATTATTCATCTAGTCACAGGCCGAGCGAC
TATTCGTCTGGTCACAGACCAAGTGACTATTCCTCTGGTCACAGGCCAAGTGATTATTCA
TCTGCTCATAGGCCAAGTGACTATTCTTGGGGACAGAGGCCAAGTGATTTCTCCAGATGG
GGTTCTTCAGATGATGATTATGGTCCTGGAGATTCACCAAGTACTGTTTTGTTTTCACCT
GTGACCGGTGCAGAAGACGGTAATAGAATGCCTAGAAACTCAAGATACTGTTTGGTAGCC
AGTAAACAGATGGTTGGCATTTTTCTTACTGTATGGGTACGAAGTGAATTGAGGGAACAT
GTCCGGAATATGAAAGTATCATGTGTTGGCAGAGGGTTGATGGGTTATCTTGGAAATAAG
GGTTCTATTTCAGTAAGTATGATGTTGCATCAGACAAGCTTTTGCTTTGTGTGCACTCAC
CTAACCTCTGGTCAGAAAGAGGGTGACGAGTTACGCAGAAATGCAGATTTTATGGAGATC
ATAAAGAAAACAAGGTTTCCGCGAGTAAATGGTGTGGATGAAGAGAAGTCCCCTGAAAAT
ATCCTTGAACACGACCGAGTTATTTGGCTAGGGGATCTGAATTATCGAATTGCACTCTCG
TACCGTTCTGCCAAAGCACTTGTTGAGATGCAAAATTGGAGAGCTTTATTGGAAAAGGAC
CAGCTGCGCATAGAACAGAGACAAGGTCGGGTTTTTGTGGGATGGAAAGAAGGAAAGATA
TATTTCCCACCGACATATAAATATTCAAGGAATTCAGATAGGTATGCAGGAGATGACATG
CACCCGAAAGAGAAACGACGAACACCTGCATGGTGTGATCGGATATTGTGGCACGGAGGT
GGTCTTCAGCAATTATCTTATGTTCGTGGGGAGTCTAGATTTTCAGATCATAGACCCGTT
TCCAGTGTGTTTTGGGCTGAAGTGGAGTCGGTCCCAAGTAGATTGAGGAAAAGTATGAGT
TGTTCAAGCTCGAGAATTGAGGTGGAGGAGCTGTTGCCATATTCTCATGGCTATACAGAA
CTCTGCTTCTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055444
PEP Infomation

pacid=37458643 transcript=PGSC0003DMT400082073 locus=PGSC0003DMG400032246 ID=PGSC0003DMT400082073.v4.03 annot-version=v4.03
Sequence

MRDENSKKSKLSWPKKLVRKWFNIKGKTEEFQSDEVVYGGGDEWRTSISEREHCTIKKTK
TEKSNSSRSMERPRRGRADLDHPQIINVHNYSVFVATWNVGGKSPSSNLNLDDWLHSAPP
ADIYVLGFQEIVPLNAGNILGAEDNGPAKKWLSLIRKTLNNGPGSSGGSSGCYTPSPVPD
PIAEWNADFEGSGRRKASLFPRRSFQTPQCWRMENDPSISQPRLDRRYSVCDRVISGHRQ
SDFDPNIRWGHRPSDYGHRPSDYSSGYRPSDYSSSHRPSDYSSGHRPSDYSSGHRPSDYS
SAHRPSDYSWGQRPSDFSRWGSSDDDYGPGDSPSTVLFSPVTGAEDGNRMPRNSRYCLVA
SKQMVGIFLTVWVRSELREHVRNMKVSCVGRGLMGYLGNKGSISVSMMLHQTSFCFVCTH
LTSGQKEGDELRRNADFMEIIKKTRFPRVNGVDEEKSPENILEHDRVIWLGDLNYRIALS
YRSAKALVEMQNWRALLEKDQLRIEQRQGRVFVGWKEGKIYFPPTYKYSRNSDRYAGDDM
HPKEKRRTPAWCDRILWHGGGLQQLSYVRGESRFSDHRPVSSVFWAEVESVPSRLRKSMS
CSSSRIEVEELLPYSHGYTELCFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400082073
Transcript Infomation

pacid=37458643 locus=PGSC0003DMG400032246 ID=PGSC0003DMT400082073.v4.03 annot-version=v4.03
Sequence

ATGAGAGATGAAAATTCCAAAAAGAGCAAGCTCTCCTGGCCAAAGAAACTTGTCAGAAAA
TGGTTCAATATTAAGGGAAAAACTGAAGAATTCCAGTCTGATGAAGTTGTTTATGGAGGT
GGCGATGAGTGGAGAACGAGCATCTCGGAGAGGGAGCATTGCACGATTAAGAAAACTAAA
ACAGAAAAATCAAATTCTTCTCGGAGTATGGAGCGTCCCCGACGAGGAAGAGCTGATCTT
GATCACCCTCAGATTATAAATGTACACAACTACAGCGTTTTCGTTGCTACATGGAACGTG
GGTGGAAAATCACCATCAAGTAATTTGAATCTAGATGACTGGCTTCATTCAGCACCACCT
GCAGATATCTATGTACTTGGATTTCAAGAAATAGTTCCTCTAAATGCTGGTAACATCCTT
GGAGCTGAAGACAATGGACCTGCAAAAAAATGGCTATCTTTGATCCGAAAGACACTTAAT
AATGGTCCTGGTAGTAGTGGAGGTAGTAGTGGCTGTTATACTCCTTCTCCTGTCCCAGAT
CCAATTGCTGAATGGAATGCTGATTTCGAGGGGTCAGGTAGACGCAAGGCATCCTTATTT
CCTCGTCGGTCATTCCAGACTCCCCAATGTTGGAGAATGGAAAATGATCCATCCATCTCA
CAACCTCGCCTTGATAGACGATACAGTGTGTGTGATAGAGTAATTTCTGGACACAGACAG
AGTGATTTTGATCCAAACATAAGATGGGGGCACAGGCCTAGTGACTATGGTCACAGGCCT
AGTGACTATTCTTCTGGTTACCGGCCAAGTGATTATTCATCTAGTCACAGGCCGAGCGAC
TATTCGTCTGGTCACAGACCAAGTGACTATTCCTCTGGTCACAGGCCAAGTGATTATTCA
TCTGCTCATAGGCCAAGTGACTATTCTTGGGGACAGAGGCCAAGTGATTTCTCCAGATGG
GGTTCTTCAGATGATGATTATGGTCCTGGAGATTCACCAAGTACTGTTTTGTTTTCACCT
GTGACCGGTGCAGAAGACGGTAATAGAATGCCTAGAAACTCAAGATACTGTTTGGTAGCC
AGTAAACAGATGGTTGGCATTTTTCTTACTGTATGGGTACGAAGTGAATTGAGGGAACAT
GTCCGGAATATGAAAGTATCATGTGTTGGCAGAGGGTTGATGGGTTATCTTGGAAATAAG
GGTTCTATTTCAGTAAGTATGATGTTGCATCAGACAAGCTTTTGCTTTGTGTGCACTCAC
CTAACCTCTGGTCAGAAAGAGGGTGACGAGTTACGCAGAAATGCAGATTTTATGGAGATC
ATAAAGAAAACAAGGTTTCCGCGAGTAAATGGTGTGGATGAAGAGAAGTCCCCTGAAAAT
ATCCTTGAACACGACCGAGTTATTTGGCTAGGGGATCTGAATTATCGAATTGCACTCTCG
TACCGTTCTGCCAAAGCACTTGTTGAGATGCAAAATTGGAGAGCTTTATTGGAAAAGGAC
CAGCTGCGCATAGAACAGAGACAAGGTCGGGTTTTTGTGGGATGGAAAGAAGGAAAGATA
TATTTCCCACCGACATATAAATATTCAAGGAATTCAGATAGGTATGCAGGAGATGACATG
CACCCGAAAGAGAAACGACGAACACCTGCATGGTGTGATCGGATATTGTGGCACGGAGGT
GGTCTTCAGCAATTATCTTATGTTCGTGGGGAGTCTAGATTTTCAGATCATAGACCCGTT
TCCAGTGTGTTTTGGGCTGAAGTGGAGTCGGTCCCAAGTAGATTGAGGAAAAGTATGAGT
TGTTCAAGCTCGAGAATTGAGGTGGAGGAGCTGTTGCCATATTCTCATGGCTATACAGAA
CTCTGCTTCTTTTGA