Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082037
CDS Infomation

pacid=37441324 polypeptide=PGSC0003DMP400055425 locus=PGSC0003DMG400032216 ID=PGSC0003DMT400082037.v4.03 annot-version=v4.03
Sequence

ATGAAGGATTCAACAACAGATCCAATTGGGCAAAATTTGATAAAGGTTATAAGCAATGTG
TGTTTCTCAGTTTTTGTGTTTTCTGTGCTTATAATTACTGTAATTGCTATTACATACCAA
CCCCCTGATCCATGGGAATCTTCTAGAGCCTTAACTAGGGTGTTTACCCAAATCGAAAAC
GCCACATTCAAAGTTGATAATTCTGTCTTAAAAACTGGTGAGGATGTTGCTAGTAGCCCT
ATTGAAGCTCCTGCTGGAGTTTTTACTTTAGTGCCGATTACTGAAGCTATTATCGAGAAA
TCTGAAGAGAATCTGTCGAATGAGACTTTGAAATCAGGATGTGAGGATGTGAATGTCGTG
AATTGTTCGGATCCTCGGGTCTTGTTCACGATCGAGAGGTTTAATTTGAAGACCTTCAAA
TCCATTGCGTTTTTGGACTATCGAACGCCTGTTAACGGGTCGAAACCGAATGAATGTGAT
GTGGCGTGGAGGTTCCGAAACAAGAAAGAGAGATCTTGGAGAAAGTACAGGGATTTCCGG
AGGTTTAAGATTGGTTTTACTGATGATTGTAGTTATAAAGTGGTACATGCAGGTCGCTGG
CATTCAGGAGGTAATGCCCGTCGTCCGAGAATCCGAGTTAATTCCACTAGAACTAGTACA
AGAGCCAAGATTGCTCCACCAGTTATAGATGAGGAGATCAATGATACCATTCCAATCATG
GGATCGGATTCAGATTTCAAGAATGGGAGATACTTGTACTATTCTCGGGGTGGCGATTAC
TGTAAAGGAATGAACCAGTACATGTGGAGTTTTCTGTGTGCTTTAGGTGAGGCTCAGTAC
TTGAATCGCACATTCGTGATGGATTTAAGTATTTGTTTGGCATCTTCTCACACTAGTAGT
CATAAGGATGAAGAAGGGAAAGACTTCAGGTTCTATTTTGATTTCGAACATTTGAAGGAG
ACCGCATACATTGTCGAGGAAGGAGACTTTCATAAAGATTGGAGGAAATGGAATAAGGCA
CATAAGAAGAAAATCTCTGTAAGAAAGGTTAAGGACTACAAAGTGTCCCCTGACCAACTG
TTGAAGGATAAGAGCACAATTATATGGAGGCAATTTGATGCCCCTGAACCGGAGAACTAT
TGGTATCGAGTCTGTGAAGGGCCTTCTGCCAAATACATCCAGAGACCGTGGCACGCAGTG
TGGAAATCAAAGCGACTGATGAATATAGTAACTGAGATCAGTGGAAGCATGGACTGGGAT
TTCGATGCTGTTCATGTTGTTCGTGGAGAGAAAGCACAGAATAAGGCGTTATGGCCCCAT
CTTGATGCTGATACATCCCCCGATTCCCTTGTCACGAAGCTTCAAGGAATTATCACACCT
TGGAGGAATCTGTATGTTGCCACAAACGAGCCGTATTATAACTATTTTGATAAGCTTAGA
TCTCACTACAAGGTGCATTTGCTTGATGATTACAACTACTTGTGGAGTAATACAAGTGAG
TGGTATAATGAAACAACACAACTGAATGGTGGCTCTCCAGTTGAATTTGATGGGTATATG
AGAGTTGAAGTTGACACAGAGGTCCTTTATCGAGCAAAATCAAGGGTCGAGACATTTTAC
AACTTGACAAAAGATTGCAAGGATGGAATTAATACGTGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055425
PEP Infomation

pacid=37441324 transcript=PGSC0003DMT400082037 locus=PGSC0003DMG400032216 ID=PGSC0003DMT400082037.v4.03 annot-version=v4.03
Sequence

MKDSTTDPIGQNLIKVISNVCFSVFVFSVLIITVIAITYQPPDPWESSRALTRVFTQIEN
ATFKVDNSVLKTGEDVASSPIEAPAGVFTLVPITEAIIEKSEENLSNETLKSGCEDVNVV
NCSDPRVLFTIERFNLKTFKSIAFLDYRTPVNGSKPNECDVAWRFRNKKERSWRKYRDFR
RFKIGFTDDCSYKVVHAGRWHSGGNARRPRIRVNSTRTSTRAKIAPPVIDEEINDTIPIM
GSDSDFKNGRYLYYSRGGDYCKGMNQYMWSFLCALGEAQYLNRTFVMDLSICLASSHTSS
HKDEEGKDFRFYFDFEHLKETAYIVEEGDFHKDWRKWNKAHKKKISVRKVKDYKVSPDQL
LKDKSTIIWRQFDAPEPENYWYRVCEGPSAKYIQRPWHAVWKSKRLMNIVTEISGSMDWD
FDAVHVVRGEKAQNKALWPHLDADTSPDSLVTKLQGIITPWRNLYVATNEPYYNYFDKLR
SHYKVHLLDDYNYLWSNTSEWYNETTQLNGGSPVEFDGYMRVEVDTEVLYRAKSRVETFY
NLTKDCKDGINTC*

Transcript Sequence

Transcript ID

PGSC0003DMT400082037
Transcript Infomation

pacid=37441324 locus=PGSC0003DMG400032216 ID=PGSC0003DMT400082037.v4.03 annot-version=v4.03
Sequence

ATGAAGGATTCAACAACAGATCCAATTGGGCAAAATTTGATAAAGGTTATAAGCAATGTG
TGTTTCTCAGTTTTTGTGTTTTCTGTGCTTATAATTACTGTAATTGCTATTACATACCAA
CCCCCTGATCCATGGGAATCTTCTAGAGCCTTAACTAGGGTGTTTACCCAAATCGAAAAC
GCCACATTCAAAGTTGATAATTCTGTCTTAAAAACTGGTGAGGATGTTGCTAGTAGCCCT
ATTGAAGCTCCTGCTGGAGTTTTTACTTTAGTGCCGATTACTGAAGCTATTATCGAGAAA
TCTGAAGAGAATCTGTCGAATGAGACTTTGAAATCAGGATGTGAGGATGTGAATGTCGTG
AATTGTTCGGATCCTCGGGTCTTGTTCACGATCGAGAGGTTTAATTTGAAGACCTTCAAA
TCCATTGCGTTTTTGGACTATCGAACGCCTGTTAACGGGTCGAAACCGAATGAATGTGAT
GTGGCGTGGAGGTTCCGAAACAAGAAAGAGAGATCTTGGAGAAAGTACAGGGATTTCCGG
AGGTTTAAGATTGGTTTTACTGATGATTGTAGTTATAAAGTGGTACATGCAGGTCGCTGG
CATTCAGGAGGTAATGCCCGTCGTCCGAGAATCCGAGTTAATTCCACTAGAACTAGTACA
AGAGCCAAGATTGCTCCACCAGTTATAGATGAGGAGATCAATGATACCATTCCAATCATG
GGATCGGATTCAGATTTCAAGAATGGGAGATACTTGTACTATTCTCGGGGTGGCGATTAC
TGTAAAGGAATGAACCAGTACATGTGGAGTTTTCTGTGTGCTTTAGGTGAGGCTCAGTAC
TTGAATCGCACATTCGTGATGGATTTAAGTATTTGTTTGGCATCTTCTCACACTAGTAGT
CATAAGGATGAAGAAGGGAAAGACTTCAGGTTCTATTTTGATTTCGAACATTTGAAGGAG
ACCGCATACATTGTCGAGGAAGGAGACTTTCATAAAGATTGGAGGAAATGGAATAAGGCA
CATAAGAAGAAAATCTCTGTAAGAAAGGTTAAGGACTACAAAGTGTCCCCTGACCAACTG
TTGAAGGATAAGAGCACAATTATATGGAGGCAATTTGATGCCCCTGAACCGGAGAACTAT
TGGTATCGAGTCTGTGAAGGGCCTTCTGCCAAATACATCCAGAGACCGTGGCACGCAGTG
TGGAAATCAAAGCGACTGATGAATATAGTAACTGAGATCAGTGGAAGCATGGACTGGGAT
TTCGATGCTGTTCATGTTGTTCGTGGAGAGAAAGCACAGAATAAGGCGTTATGGCCCCAT
CTTGATGCTGATACATCCCCCGATTCCCTTGTCACGAAGCTTCAAGGAATTATCACACCT
TGGAGGAATCTGTATGTTGCCACAAACGAGCCGTATTATAACTATTTTGATAAGCTTAGA
TCTCACTACAAGGTGCATTTGCTTGATGATTACAACTACTTGTGGAGTAATACAAGTGAG
TGGTATAATGAAACAACACAACTGAATGGTGGCTCTCCAGTTGAATTTGATGGGTATATG
AGAGTTGAAGTTGACACAGAGGTCCTTTATCGAGCAAAATCAAGGGTCGAGACATTTTAC
AACTTGACAAAAGATTGCAAGGATGGAATTAATACGTGCTAG