Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082031
CDS Infomation

pacid=37436545 polypeptide=PGSC0003DMP400055422 locus=PGSC0003DMG400032210 ID=PGSC0003DMT400082031.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAACTAGTATCACAGTTGTGTCTTTGCTAGTTTGCCTTACATTTGTGTTGGTT
AAAGCTGAGGATCCTTACCTTCGTTTCGAGTGGAATGTTACTTATGGAACTATCGCTCCA
TTAGGGGTCCCACTACAAGGGATCCTTATAAATGGACAACTTCCAGGGCCTAGGATCAAT
TGTACGTCGAATAACAACATCGTTGTAAATGTATTCAATCATTTAGATGAGCCGTTGTTG
TTAACATGGAACGGTGTTCAACAAAGGAAGAATTCGTGGCAAGATGGTACCCCGGGTACT
ATGTGTCCAATTATGCCTGGTACAAACTTTACATACAGGTTCCAGGTGAAGGATCAAATC
GGTAGCTTCTTCTACTTCCCAACAACAGACTTGCATCGCGCTGCTGGTGGTTTTGGTGCT
ATAAATGTTCATAGTCGTGCACTTATCCCAGTTCCATTTGACAACCCCGCGGATGACTAT
AGTGTGTTTGTGGGTGATTGGTATAACAAGGGGTATAAGTCATTGAAGAAGATATTGGAT
GGAGGAAGGACAATTGGAAGGCCCGATGGGATTCACATAAATGGAAAATCTGTAAAGGTT
GGTGACAAAGCTGCGGAGCCACTATACAAGATGGAGGCTGGTAAGACGTATAGGTATAGA
TTTTGTAATGTCGGTATGAGGACATCAGTGAATGTTAGGATCCAAGGACACCCGATGAAG
TTGGTGGAAATAGAAGGATCCCACACAGTGCAGAATGTATACGAGTCACTTGACCTTCAT
GTTGGTCAATGCCTATCGGTGTTGGTGACTGCTGATCAAGAGCCAAAGGACTATTACATG
ATTGTTTCGAGCAGATTCTTGAAGCAAGCTGAATTGTCCTCTGTGTCTATCATCCGATAC
ACAAATGGAAAGGGACCAGCATCTTCTGATCTCCCAGCACCACCACCAGAAAACACTAAA
GGCATTGCCTGGTCCATGAACCAATTCCGGTCTTTCAGATGGAACCTTACTGCTAGTGCT
GCCCGTCCCAACCCTCAGGGATCATACCACTATGGACAGATCAACATCACTCGCACTTTC
AAGATTGTAAACTCAAGGAGTGAAGTTGATGGAAAGCTTAGATACGCGTTGAATGGTATC
TCCCACACTGATTCAGAGACCCCATTCAAGCTAGCTGAATACTTTGGAGCTACTGATAAG
GTGTTCAAGTATGATCTCATGGATGACGAACCATCAACGTCATCAGACAAGGTAACCGTT
GCCTCAAATATCAAGAATGCAACATTCCGTAACTTTGTTGAGATCATCTTTGAGAACCAT
GAGAAGACCATCCAAACCTATCACTTGGATGGATATTCCTTCTTCGCAGTTGGGGTTGAG
CCAGGGAAGTGGACTCCTGAGAAAAGAAAGAACTACAACTTAGTCGATGCCATAAACAGA
CACAGCATCCAAGTCTATCCTAACTCATGGGCCGCGGTCATGACCACACTTGACAATGCA
GGACTATGGAGCTTGAGATCAGAAATGTGGGAGAGGTTCTACTTAGGACAACAACTATAC
TTTAGTGTTCTCTCACCAGCTCGCTCGTTGAGAGATGAGTACAACCTCCCTGACAACCAC
CCTCTTTGCGGTATTGTTAAGAGTATGCCAATGCCTTCTCCATACAAGGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400055422
PEP Infomation

pacid=37436545 transcript=PGSC0003DMT400082031 locus=PGSC0003DMG400032210 ID=PGSC0003DMT400082031.v4.03 annot-version=v4.03
Sequence

MERTSITVVSLLVCLTFVLVKAEDPYLRFEWNVTYGTIAPLGVPLQGILINGQLPGPRIN
CTSNNNIVVNVFNHLDEPLLLTWNGVQQRKNSWQDGTPGTMCPIMPGTNFTYRFQVKDQI
GSFFYFPTTDLHRAAGGFGAINVHSRALIPVPFDNPADDYSVFVGDWYNKGYKSLKKILD
GGRTIGRPDGIHINGKSVKVGDKAAEPLYKMEAGKTYRYRFCNVGMRTSVNVRIQGHPMK
LVEIEGSHTVQNVYESLDLHVGQCLSVLVTADQEPKDYYMIVSSRFLKQAELSSVSIIRY
TNGKGPASSDLPAPPPENTKGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTF
KIVNSRSEVDGKLRYALNGISHTDSETPFKLAEYFGATDKVFKYDLMDDEPSTSSDKVTV
ASNIKNATFRNFVEIIFENHEKTIQTYHLDGYSFFAVGVEPGKWTPEKRKNYNLVDAINR
HSIQVYPNSWAAVMTTLDNAGLWSLRSEMWERFYLGQQLYFSVLSPARSLRDEYNLPDNH
PLCGIVKSMPMPSPYKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400082031
Transcript Infomation

pacid=37436545 locus=PGSC0003DMG400032210 ID=PGSC0003DMT400082031.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAACTAGTATCACAGTTGTGTCTTTGCTAGTTTGCCTTACATTTGTGTTGGTT
AAAGCTGAGGATCCTTACCTTCGTTTCGAGTGGAATGTTACTTATGGAACTATCGCTCCA
TTAGGGGTCCCACTACAAGGGATCCTTATAAATGGACAACTTCCAGGGCCTAGGATCAAT
TGTACGTCGAATAACAACATCGTTGTAAATGTATTCAATCATTTAGATGAGCCGTTGTTG
TTAACATGGAACGGTGTTCAACAAAGGAAGAATTCGTGGCAAGATGGTACCCCGGGTACT
ATGTGTCCAATTATGCCTGGTACAAACTTTACATACAGGTTCCAGGTGAAGGATCAAATC
GGTAGCTTCTTCTACTTCCCAACAACAGACTTGCATCGCGCTGCTGGTGGTTTTGGTGCT
ATAAATGTTCATAGTCGTGCACTTATCCCAGTTCCATTTGACAACCCCGCGGATGACTAT
AGTGTGTTTGTGGGTGATTGGTATAACAAGGGGTATAAGTCATTGAAGAAGATATTGGAT
GGAGGAAGGACAATTGGAAGGCCCGATGGGATTCACATAAATGGAAAATCTGTAAAGGTT
GGTGACAAAGCTGCGGAGCCACTATACAAGATGGAGGCTGGTAAGACGTATAGGTATAGA
TTTTGTAATGTCGGTATGAGGACATCAGTGAATGTTAGGATCCAAGGACACCCGATGAAG
TTGGTGGAAATAGAAGGATCCCACACAGTGCAGAATGTATACGAGTCACTTGACCTTCAT
GTTGGTCAATGCCTATCGGTGTTGGTGACTGCTGATCAAGAGCCAAAGGACTATTACATG
ATTGTTTCGAGCAGATTCTTGAAGCAAGCTGAATTGTCCTCTGTGTCTATCATCCGATAC
ACAAATGGAAAGGGACCAGCATCTTCTGATCTCCCAGCACCACCACCAGAAAACACTAAA
GGCATTGCCTGGTCCATGAACCAATTCCGGTCTTTCAGATGGAACCTTACTGCTAGTGCT
GCCCGTCCCAACCCTCAGGGATCATACCACTATGGACAGATCAACATCACTCGCACTTTC
AAGATTGTAAACTCAAGGAGTGAAGTTGATGGAAAGCTTAGATACGCGTTGAATGGTATC
TCCCACACTGATTCAGAGACCCCATTCAAGCTAGCTGAATACTTTGGAGCTACTGATAAG
GTGTTCAAGTATGATCTCATGGATGACGAACCATCAACGTCATCAGACAAGGTAACCGTT
GCCTCAAATATCAAGAATGCAACATTCCGTAACTTTGTTGAGATCATCTTTGAGAACCAT
GAGAAGACCATCCAAACCTATCACTTGGATGGATATTCCTTCTTCGCAGTTGGGGTTGAG
CCAGGGAAGTGGACTCCTGAGAAAAGAAAGAACTACAACTTAGTCGATGCCATAAACAGA
CACAGCATCCAAGTCTATCCTAACTCATGGGCCGCGGTCATGACCACACTTGACAATGCA
GGACTATGGAGCTTGAGATCAGAAATGTGGGAGAGGTTCTACTTAGGACAACAACTATAC
TTTAGTGTTCTCTCACCAGCTCGCTCGTTGAGAGATGAGTACAACCTCCCTGACAACCAC
CCTCTTTGCGGTATTGTTAAGAGTATGCCAATGCCTTCTCCATACAAGGCATAG