Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082022
CDS Infomation

pacid=37440471 polypeptide=PGSC0003DMP400055417 locus=PGSC0003DMG400032206 ID=PGSC0003DMT400082022.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTTCTTCGGACCCTCTAATCCAATTCCTCCATCATCATTCGGACCACCAAGA
ACCGACCCGTTAACCTGCCGGAATGACCCGTTAACATACCGGAAAGTTAGCGTACCCAGA
TCCAAACCGGATTCCTCTTCAATGGAGGTTGAGAAGCTGAAGGTGAAGGAAGCAAAGGAA
AGGAAAGAGGAAACGAACAAAAAGATAGCTTCACAGAAAGCTGTATCGATTATTCTTCGA
AGAGAAGCTGCTAAAGCAGTGATTGAGTATAAGAAGAAGAAAGGGAATTCGAAGAAACTA
TTGCCTCGTACTGTTCTTGAAGCTCTTCATGAACGTATTACTGCTTTGCGTTGGGAATCT
GCTCTTAAGGTCTTTGAACTCCTCCAGGAGCAGTTGTGGTACAGGCCCAATCCAGGCATT
TATATCAAATTAATTGTCATGCTTGGAAAATGTAAGGAACCTGAGAAAGCTCAATCTTTA
TTCGAGATGATGGTGGAGGAAGGCTGTGTCGTGAATCAAGAAGCTTACACTGCTCTTTTG
TCCGCCTATAGCCGTAGTGGTCGCTTTCATGAAGCTTTTTCTATCCTGGAAGAGATGAAG
AACATTCCGAACTGCCTCCCCGATGTCTTCACATATAGCATCCTGATAAAATCCTGCCTG
CAGGTTTATGACTTCGACAAAGTGCAAATCCTGCTTTCCGACATGGAATGCATGGGGATC
AAGGCCAATACAGTAACATATAATACTCTTATTGATTCCTATGGCAAAGCGAAAAGGTTC
AAAGAGATGGAATCCACACTTGTAGAAATGCTGCGGCGAAGAGACTGTAAGCCCGATGTG
TGGACCATGAACTCTACATTGAGAGCATTTGGTGGCAGCGGGCAAATAGAAATGATGGAA
AAATGCTATGAGAAGTTTCAGAGTGCTGGAATTGAACCTAGTATCAAGACATTCAACATA
CTCTTAGATTCATACGGGAAAACAGAAAATTACGAGAAAATGGGTGCTGTGATGGAGTTT
ATGCAGAAATATTATTTTTCATGGACCATAGTTACTTACAATATCGTAATAGATGCATTT
GGAAGGGCTGGAGATTTAAAGCAAATGGAATTTCTTTTTAGGCTGATGCAGTCTGAGAGG
ATAAAACCAAACTGTGTTACTCTTTGTTCTCTTGTAAGAGCTTATGGGAAAGCTGGCAAA
GCTGAAAAACTTGGAGCTGTTTTGCGGTTTATTGAGAATTCTGACGTGGCACTTGACACC
GTGTTTTTTAACTGCCTAGTGGATGCATATGGGATGATGGGATGCTTCACAGAGTTGAAA
GGGGTGCTTGAGATGATGGAACAAAGTGGATGTAAGCCAGATAAGATAACATACAGAAGT
ATGATTAAAGCATATTCAATAAATGGAATGACTAACAAAGCATCAGAGCTCCGAAACCTA
CTTGCCTCGTTGGAGAAGGCGCGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400055417
PEP Infomation

pacid=37440471 transcript=PGSC0003DMT400082022 locus=PGSC0003DMG400032206 ID=PGSC0003DMT400082022.v4.03 annot-version=v4.03
Sequence

MASFFGPSNPIPPSSFGPPRTDPLTCRNDPLTYRKVSVPRSKPDSSSMEVEKLKVKEAKE
RKEETNKKIASQKAVSIILRREAAKAVIEYKKKKGNSKKLLPRTVLEALHERITALRWES
ALKVFELLQEQLWYRPNPGIYIKLIVMLGKCKEPEKAQSLFEMMVEEGCVVNQEAYTALL
SAYSRSGRFHEAFSILEEMKNIPNCLPDVFTYSILIKSCLQVYDFDKVQILLSDMECMGI
KANTVTYNTLIDSYGKAKRFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMME
KCYEKFQSAGIEPSIKTFNILLDSYGKTENYEKMGAVMEFMQKYYFSWTIVTYNIVIDAF
GRAGDLKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDT
VFFNCLVDAYGMMGCFTELKGVLEMMEQSGCKPDKITYRSMIKAYSINGMTNKASELRNL
LASLEKAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400082022
Transcript Infomation

pacid=37440471 locus=PGSC0003DMG400032206 ID=PGSC0003DMT400082022.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTTCTTCGGACCCTCTAATCCAATTCCTCCATCATCATTCGGACCACCAAGA
ACCGACCCGTTAACCTGCCGGAATGACCCGTTAACATACCGGAAAGTTAGCGTACCCAGA
TCCAAACCGGATTCCTCTTCAATGGAGGTTGAGAAGCTGAAGGTGAAGGAAGCAAAGGAA
AGGAAAGAGGAAACGAACAAAAAGATAGCTTCACAGAAAGCTGTATCGATTATTCTTCGA
AGAGAAGCTGCTAAAGCAGTGATTGAGTATAAGAAGAAGAAAGGGAATTCGAAGAAACTA
TTGCCTCGTACTGTTCTTGAAGCTCTTCATGAACGTATTACTGCTTTGCGTTGGGAATCT
GCTCTTAAGGTCTTTGAACTCCTCCAGGAGCAGTTGTGGTACAGGCCCAATCCAGGCATT
TATATCAAATTAATTGTCATGCTTGGAAAATGTAAGGAACCTGAGAAAGCTCAATCTTTA
TTCGAGATGATGGTGGAGGAAGGCTGTGTCGTGAATCAAGAAGCTTACACTGCTCTTTTG
TCCGCCTATAGCCGTAGTGGTCGCTTTCATGAAGCTTTTTCTATCCTGGAAGAGATGAAG
AACATTCCGAACTGCCTCCCCGATGTCTTCACATATAGCATCCTGATAAAATCCTGCCTG
CAGGTTTATGACTTCGACAAAGTGCAAATCCTGCTTTCCGACATGGAATGCATGGGGATC
AAGGCCAATACAGTAACATATAATACTCTTATTGATTCCTATGGCAAAGCGAAAAGGTTC
AAAGAGATGGAATCCACACTTGTAGAAATGCTGCGGCGAAGAGACTGTAAGCCCGATGTG
TGGACCATGAACTCTACATTGAGAGCATTTGGTGGCAGCGGGCAAATAGAAATGATGGAA
AAATGCTATGAGAAGTTTCAGAGTGCTGGAATTGAACCTAGTATCAAGACATTCAACATA
CTCTTAGATTCATACGGGAAAACAGAAAATTACGAGAAAATGGGTGCTGTGATGGAGTTT
ATGCAGAAATATTATTTTTCATGGACCATAGTTACTTACAATATCGTAATAGATGCATTT
GGAAGGGCTGGAGATTTAAAGCAAATGGAATTTCTTTTTAGGCTGATGCAGTCTGAGAGG
ATAAAACCAAACTGTGTTACTCTTTGTTCTCTTGTAAGAGCTTATGGGAAAGCTGGCAAA
GCTGAAAAACTTGGAGCTGTTTTGCGGTTTATTGAGAATTCTGACGTGGCACTTGACACC
GTGTTTTTTAACTGCCTAGTGGATGCATATGGGATGATGGGATGCTTCACAGAGTTGAAA
GGGGTGCTTGAGATGATGGAACAAAGTGGATGTAAGCCAGATAAGATAACATACAGAAGT
ATGATTAAAGCATATTCAATAAATGGAATGACTAACAAAGCATCAGAGCTCCGAAACCTA
CTTGCCTCGTTGGAGAAGGCGCGATAG