Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400082008
CDS Infomation

pacid=37438307 polypeptide=PGSC0003DMP400055404 locus=PGSC0003DMG400032199 ID=PGSC0003DMT400082008.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTTTGAGATTTATTGTTCCAATTTTCTTCTTGATTTCAATTTTCGTAGCATCG
AATGCTCAATTAAGTTCTACATTTTATGCTACTACTTGCCCTAATGTTACTGAAGTTGTA
CGTGGTGTCATGGAACAAACTCAACGTACCGATGTTCGTGCTGGTGCCAAAATTATTCGC
CTTCATTTTCACGATTGCTTCGTTAATGGTTGTGATGGATCTATTTTGCTAGATAATGCA
ACTGGGATTATAAGTGAAAAAGATGCAGCTGCAAATGTTGGTGCTGGAGGATTTGAAATT
GTGGATGATATTAAAACTGCATTGGAAAATGTGTGCCCCGGTGTTGTATCTTGTGCTGAT
ATTTTAGCTCTTGCATCTGAAATCGGAGTTGCCTTGGTTGGAGGTCCAACATGGCAAGTT
CTTTTAGGGAGAAGAGATAGCTTAACAGCAAATAGAACTGGAGTTGATAGTGATATCCCA
AGCCCAGTTGAAAGTCTTGATGTTATGAGACCACAATTCACCAACAAGGGAATGGATATA
ACTGATCTTGTTGCTCTATCAGGTGCACATACATTTGGAAGAGCAAGATGTAGGACATTT
CAACAAAGACTTTTCAACTTTAATGGAAGTGGTAGCCCTGATCCAACAATAAACTCAACT
TATTTACCAACACTACAAGGAACTTGTCCACAAGGAAACGATGGAAATACTTTTGAAAAT
CTTGATAAAACAACTCCAGATAATTTTGATAATGACTATTACATAAATCTTCAAAATCAA
GAAGGTCTACTTCAAACAGATCAAGAATTATTTTCGACATCGGGATCCGATACAATCGCG
ATAGTGAATCGTTACGCGGGTAGTCAGACTCAATTTTTCGATGATTTTGCTAGCTCGATG
ATTAAATTGGGAAATATCGGTGCGTTAACGGGTACTAATGGAGAGATTAGGACTGATTGT
AAGAGGGTTAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055404
PEP Infomation

pacid=37438307 transcript=PGSC0003DMT400082008 locus=PGSC0003DMG400032199 ID=PGSC0003DMT400082008.v4.03 annot-version=v4.03
Sequence

MSFLRFIVPIFFLISIFVASNAQLSSTFYATTCPNVTEVVRGVMEQTQRTDVRAGAKIIR
LHFHDCFVNGCDGSILLDNATGIISEKDAAANVGAGGFEIVDDIKTALENVCPGVVSCAD
ILALASEIGVALVGGPTWQVLLGRRDSLTANRTGVDSDIPSPVESLDVMRPQFTNKGMDI
TDLVALSGAHTFGRARCRTFQQRLFNFNGSGSPDPTINSTYLPTLQGTCPQGNDGNTFEN
LDKTTPDNFDNDYYINLQNQEGLLQTDQELFSTSGSDTIAIVNRYAGSQTQFFDDFASSM
IKLGNIGALTGTNGEIRTDCKRVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400082008
Transcript Infomation

pacid=37438307 locus=PGSC0003DMG400032199 ID=PGSC0003DMT400082008.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTTTGAGATTTATTGTTCCAATTTTCTTCTTGATTTCAATTTTCGTAGCATCG
AATGCTCAATTAAGTTCTACATTTTATGCTACTACTTGCCCTAATGTTACTGAAGTTGTA
CGTGGTGTCATGGAACAAACTCAACGTACCGATGTTCGTGCTGGTGCCAAAATTATTCGC
CTTCATTTTCACGATTGCTTCGTTAATGGTTGTGATGGATCTATTTTGCTAGATAATGCA
ACTGGGATTATAAGTGAAAAAGATGCAGCTGCAAATGTTGGTGCTGGAGGATTTGAAATT
GTGGATGATATTAAAACTGCATTGGAAAATGTGTGCCCCGGTGTTGTATCTTGTGCTGAT
ATTTTAGCTCTTGCATCTGAAATCGGAGTTGCCTTGGTTGGAGGTCCAACATGGCAAGTT
CTTTTAGGGAGAAGAGATAGCTTAACAGCAAATAGAACTGGAGTTGATAGTGATATCCCA
AGCCCAGTTGAAAGTCTTGATGTTATGAGACCACAATTCACCAACAAGGGAATGGATATA
ACTGATCTTGTTGCTCTATCAGGTGCACATACATTTGGAAGAGCAAGATGTAGGACATTT
CAACAAAGACTTTTCAACTTTAATGGAAGTGGTAGCCCTGATCCAACAATAAACTCAACT
TATTTACCAACACTACAAGGAACTTGTCCACAAGGAAACGATGGAAATACTTTTGAAAAT
CTTGATAAAACAACTCCAGATAATTTTGATAATGACTATTACATAAATCTTCAAAATCAA
GAAGGTCTACTTCAAACAGATCAAGAATTATTTTCGACATCGGGATCCGATACAATCGCG
ATAGTGAATCGTTACGCGGGTAGTCAGACTCAATTTTTCGATGATTTTGCTAGCTCGATG
ATTAAATTGGGAAATATCGGTGCGTTAACGGGTACTAATGGAGAGATTAGGACTGATTGT
AAGAGGGTTAATTAG