Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081999
CDS Infomation

pacid=37435596 polypeptide=PGSC0003DMP400055399 locus=PGSC0003DMG400032195 ID=PGSC0003DMT400081999.v4.03 annot-version=v4.03
Sequence

ATGGCGACGCTTTCATGGAGGCACCATACCCTAATTCAAGCTCTACTCTCTCGTGGTCCT
CTCAAAGAAAAGGATTTTCAATCTATATTCACCAAAATCACCGGCAAATCCCCAGGTAAT
CATCAGTCACTATTCAATGAATACCTGAGAAAGATAAACGGGGAGCTCGCTTTTGTGCAG
TTAGAGCTACGGGCATGTAGAAACCAGTATGACGGACATGTGCATTATGGTGTTGTCAAC
AATGTTTCGGATGAGTCATCCAAACTAGGAACTAAATATTCAGTTCCCCAGATTGCTTTC
TATAAAGGCATTATTGAAGCAATTGTTCAAGATGCGGCAGCTCAGGGATTTATATCGACC
ATTGATGCACTGAACATACGGCTCGAAAATCAGTTTCTAGCTGGAACAGAATCCCAAACT
CAGGGAGGTTCAACACATATTCCTGCAGCGTTTAGGAATTTTTCAATGTCTCAAAAGGAG
AGAACCCTTGAGGAACTTGCGAGGGACCACTGGCTTTCTCTAACAGATGGTAAGGTAGGA
CTAGGAGTGCGTTCATTCCTTGATCTCAGAAGTTGGTTTCGCAGTAATGAGGTTCCTCCA
TGTGAAGTTTGCAATGAAGCTGCTGTGAAGGCTGAGCTTTGCAAAAATGAAGGCTGTAAT
GTTCGTATCCATATGTACTGTCTGAGAATGAAGTTCTCCAAAAGCAGGGCTGAAAAAGTT
TGTCCCGGGTGTGGGACAAGATGGCATTATAACATTGCAAAAGTAGAAGCTCTGGATGAA
GAAGAGGATGCATCTGCTCCTCCTGAGAGTCAGCTGCCTCGTGAACCCTCAACGAGAAAA
AGGCCAAGGACCCGTGCAGTTATTGACTCTGATACTCTTGAGCCTGGATCATCTCAAAGT
ACAAGGCTGACTCGACGTTCTGTCCGTCTGAAGAGTTCAGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055399
PEP Infomation

pacid=37435596 transcript=PGSC0003DMT400081999 locus=PGSC0003DMG400032195 ID=PGSC0003DMT400081999.v4.03 annot-version=v4.03
Sequence

MATLSWRHHTLIQALLSRGPLKEKDFQSIFTKITGKSPGNHQSLFNEYLRKINGELAFVQ
LELRACRNQYDGHVHYGVVNNVSDESSKLGTKYSVPQIAFYKGIIEAIVQDAAAQGFIST
IDALNIRLENQFLAGTESQTQGGSTHIPAAFRNFSMSQKERTLEELARDHWLSLTDGKVG
LGVRSFLDLRSWFRSNEVPPCEVCNEAAVKAELCKNEGCNVRIHMYCLRMKFSKSRAEKV
CPGCGTRWHYNIAKVEALDEEEDASAPPESQLPREPSTRKRPRTRAVIDSDTLEPGSSQS
TRLTRRSVRLKSSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400081999
Transcript Infomation

pacid=37435596 locus=PGSC0003DMG400032195 ID=PGSC0003DMT400081999.v4.03 annot-version=v4.03
Sequence

ATGGCGACGCTTTCATGGAGGCACCATACCCTAATTCAAGCTCTACTCTCTCGTGGTCCT
CTCAAAGAAAAGGATTTTCAATCTATATTCACCAAAATCACCGGCAAATCCCCAGGTAAT
CATCAGTCACTATTCAATGAATACCTGAGAAAGATAAACGGGGAGCTCGCTTTTGTGCAG
TTAGAGCTACGGGCATGTAGAAACCAGTATGACGGACATGTGCATTATGGTGTTGTCAAC
AATGTTTCGGATGAGTCATCCAAACTAGGAACTAAATATTCAGTTCCCCAGATTGCTTTC
TATAAAGGCATTATTGAAGCAATTGTTCAAGATGCGGCAGCTCAGGGATTTATATCGACC
ATTGATGCACTGAACATACGGCTCGAAAATCAGTTTCTAGCTGGAACAGAATCCCAAACT
CAGGGAGGTTCAACACATATTCCTGCAGCGTTTAGGAATTTTTCAATGTCTCAAAAGGAG
AGAACCCTTGAGGAACTTGCGAGGGACCACTGGCTTTCTCTAACAGATGGTAAGGTAGGA
CTAGGAGTGCGTTCATTCCTTGATCTCAGAAGTTGGTTTCGCAGTAATGAGGTTCCTCCA
TGTGAAGTTTGCAATGAAGCTGCTGTGAAGGCTGAGCTTTGCAAAAATGAAGGCTGTAAT
GTTCGTATCCATATGTACTGTCTGAGAATGAAGTTCTCCAAAAGCAGGGCTGAAAAAGTT
TGTCCCGGGTGTGGGACAAGATGGCATTATAACATTGCAAAAGTAGAAGCTCTGGATGAA
GAAGAGGATGCATCTGCTCCTCCTGAGAGTCAGCTGCCTCGTGAACCCTCAACGAGAAAA
AGGCCAAGGACCCGTGCAGTTATTGACTCTGATACTCTTGAGCCTGGATCATCTCAAAGT
ACAAGGCTGACTCGACGTTCTGTCCGTCTGAAGAGTTCAGGTTAA