Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081993
CDS Infomation

pacid=37440430 polypeptide=PGSC0003DMP400055393 locus=PGSC0003DMG400032193 ID=PGSC0003DMT400081993.v4.03 annot-version=v4.03
Sequence

ATGATAATCAGATCAATTTCTTCATCAAAGTTGAAGAAATTGATTTTTCCACTTTATCTC
TCAGCATATACACACAAAAATCCCATACCCAACTCTTCTCCTCCAATTCTTGAAAATGTT
TATACCCAAAACCCTGCTAAAACCCTTGTCCCTCCATTCTTGTTCAGCTTTAGAAACTAC
TCTACACCTATAAAAATCCAATCTTTACCAGTTTCTAGAGATGGGAATTTTGAGGAATCC
ATTTCTGATGTTGTTTGCCCTGGTTGTGGTGTTAAAATGCAAGATTCTGACCAAAAACAA
CCAGGGTATTTCATCAAGCCTTGTGTTAAACCCCCAAATTATAAAACACCCATTAACAAG
AATCCAGTTGCTGATGAGCCTGAGATATCCTTTTCTCTGAAAAGGGGTTTGCTTAATGAG
GATGTAGAGCATGAAAATCAAGAAAATGTTGAAAAACCAGGGCAGAAAGGTGAAAAGCCT
GTTGTTTGTGCTAGGTGTCATAGTTTGAGGTATTATGGGAAGGTTAAGGATCCAAGTGTG
GAGAATTTGTTGCCTGATTTTGATTTTGATCATACTGTTGGGAGGAGGTTGATGTCGAGT
AGTGGGGCGAGGGCGGTTGTTTTGATGGTGGTTGATGCATCTGATTTCGATGGATCGTTT
CCTAGGAAAGTAGCTCAGTTAGTTTCTAGGACAATTGAAGAGAATTCGCGGGCGTGGAAG
GAGGGGAAATCGGGGAATGTACCTAGAATGGTATTGGTAGTTACAAAAATTGATCTTTTA
CCTAGCTCATTGTCACCTACTAGGCTTGAACATTGGGTTAGGACAAGGGCAAGAGAGGGT
GGGGCGATTAAGTTGACGAGTGTACATATGGTTAGTGCAGTGAGGGATTGGGGAGTGAAG
AATTTGATTGATGATGTAGTGGGACTGGCCGGGCCAAGAGGGCATATTTGGGCAGTAGGA
GCACAAAATGCTGGAAAGAGCACATTAATCAATGCAATAGGGAAGTGTTCAGGTGGAAAT
CTAAGCCATTTAACAGAGGCACCGGTGCCGGGGACTACATTGGGAATACTGAGGGTAGAA
GGGGTGCTTCCAAGGAATGCCAAGTTGTTTGATACTCCGGGGCTTTTACATCCGCATCAG
ATTTCGACAAGGTTGACTAGGGATGAGCAGAAGCTAGTTCATATAAGTAAAGAGTTGAAG
CCAAGGACATATAGAATCAAGGTTGGACATTCAGTTCATATAGGTGGGCTCATGCGGTTG
GATGTGGAAGAATTATCTGTTGATTCCGTGTATGTTACAGTTTGGGCATCTCCGCTAATT
CCACTTCACATGGGGAGGACAGAGAACGTCAGCACAATGCTGGAAGAACATTTTGGGCGT
CAGCTGCAGCCGCCGATTGGAGAGGGACGATCTGAAGAGCTAGGGAAATGGTTGAAGAGG
GAATTTCATGTGAATGGAAATATGTGGGATTCAAGTTCTGTTGATATTGCTGCTTCTGGT
CTTGGTTGGTTTGCCATTGGACTAAAGGGAGATGCTAAATTAGGTGTCTGGACATATGAT
GGTGTTGATGTCATTGTTCGTAACGCGTTACTCCCAAACAGATCCTATGATTTTGAAGTT
GCTGGCTTTACTGTTTCAAAAATTGTTTCCACTGCTGACCGCTCCTCAAATAAGCAGCGC
TGTGATGAGAAGAAGAGGAAACTGAGCGACTCTACTGCAGAAAAACCTGCAAATCCATCA
ACTGTCGATGTGGCTTCAACTACTTGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055393
PEP Infomation

pacid=37440430 transcript=PGSC0003DMT400081993 locus=PGSC0003DMG400032193 ID=PGSC0003DMT400081993.v4.03 annot-version=v4.03
Sequence

MIIRSISSSKLKKLIFPLYLSAYTHKNPIPNSSPPILENVYTQNPAKTLVPPFLFSFRNY
STPIKIQSLPVSRDGNFEESISDVVCPGCGVKMQDSDQKQPGYFIKPCVKPPNYKTPINK
NPVADEPEISFSLKRGLLNEDVEHENQENVEKPGQKGEKPVVCARCHSLRYYGKVKDPSV
ENLLPDFDFDHTVGRRLMSSSGARAVVLMVVDASDFDGSFPRKVAQLVSRTIEENSRAWK
EGKSGNVPRMVLVVTKIDLLPSSLSPTRLEHWVRTRAREGGAIKLTSVHMVSAVRDWGVK
NLIDDVVGLAGPRGHIWAVGAQNAGKSTLINAIGKCSGGNLSHLTEAPVPGTTLGILRVE
GVLPRNAKLFDTPGLLHPHQISTRLTRDEQKLVHISKELKPRTYRIKVGHSVHIGGLMRL
DVEELSVDSVYVTVWASPLIPLHMGRTENVSTMLEEHFGRQLQPPIGEGRSEELGKWLKR
EFHVNGNMWDSSSVDIAASGLGWFAIGLKGDAKLGVWTYDGVDVIVRNALLPNRSYDFEV
AGFTVSKIVSTADRSSNKQRCDEKKRKLSDSTAEKPANPSTVDVASTTC*

Transcript Sequence

Transcript ID

PGSC0003DMT400081993
Transcript Infomation

pacid=37440430 locus=PGSC0003DMG400032193 ID=PGSC0003DMT400081993.v4.03 annot-version=v4.03
Sequence

ATGATAATCAGATCAATTTCTTCATCAAAGTTGAAGAAATTGATTTTTCCACTTTATCTC
TCAGCATATACACACAAAAATCCCATACCCAACTCTTCTCCTCCAATTCTTGAAAATGTT
TATACCCAAAACCCTGCTAAAACCCTTGTCCCTCCATTCTTGTTCAGCTTTAGAAACTAC
TCTACACCTATAAAAATCCAATCTTTACCAGTTTCTAGAGATGGGAATTTTGAGGAATCC
ATTTCTGATGTTGTTTGCCCTGGTTGTGGTGTTAAAATGCAAGATTCTGACCAAAAACAA
CCAGGGTATTTCATCAAGCCTTGTGTTAAACCCCCAAATTATAAAACACCCATTAACAAG
AATCCAGTTGCTGATGAGCCTGAGATATCCTTTTCTCTGAAAAGGGGTTTGCTTAATGAG
GATGTAGAGCATGAAAATCAAGAAAATGTTGAAAAACCAGGGCAGAAAGGTGAAAAGCCT
GTTGTTTGTGCTAGGTGTCATAGTTTGAGGTATTATGGGAAGGTTAAGGATCCAAGTGTG
GAGAATTTGTTGCCTGATTTTGATTTTGATCATACTGTTGGGAGGAGGTTGATGTCGAGT
AGTGGGGCGAGGGCGGTTGTTTTGATGGTGGTTGATGCATCTGATTTCGATGGATCGTTT
CCTAGGAAAGTAGCTCAGTTAGTTTCTAGGACAATTGAAGAGAATTCGCGGGCGTGGAAG
GAGGGGAAATCGGGGAATGTACCTAGAATGGTATTGGTAGTTACAAAAATTGATCTTTTA
CCTAGCTCATTGTCACCTACTAGGCTTGAACATTGGGTTAGGACAAGGGCAAGAGAGGGT
GGGGCGATTAAGTTGACGAGTGTACATATGGTTAGTGCAGTGAGGGATTGGGGAGTGAAG
AATTTGATTGATGATGTAGTGGGACTGGCCGGGCCAAGAGGGCATATTTGGGCAGTAGGA
GCACAAAATGCTGGAAAGAGCACATTAATCAATGCAATAGGGAAGTGTTCAGGTGGAAAT
CTAAGCCATTTAACAGAGGCACCGGTGCCGGGGACTACATTGGGAATACTGAGGGTAGAA
GGGGTGCTTCCAAGGAATGCCAAGTTGTTTGATACTCCGGGGCTTTTACATCCGCATCAG
ATTTCGACAAGGTTGACTAGGGATGAGCAGAAGCTAGTTCATATAAGTAAAGAGTTGAAG
CCAAGGACATATAGAATCAAGGTTGGACATTCAGTTCATATAGGTGGGCTCATGCGGTTG
GATGTGGAAGAATTATCTGTTGATTCCGTGTATGTTACAGTTTGGGCATCTCCGCTAATT
CCACTTCACATGGGGAGGACAGAGAACGTCAGCACAATGCTGGAAGAACATTTTGGGCGT
CAGCTGCAGCCGCCGATTGGAGAGGGACGATCTGAAGAGCTAGGGAAATGGTTGAAGAGG
GAATTTCATGTGAATGGAAATATGTGGGATTCAAGTTCTGTTGATATTGCTGCTTCTGGT
CTTGGTTGGTTTGCCATTGGACTAAAGGGAGATGCTAAATTAGGTGTCTGGACATATGAT
GGTGTTGATGTCATTGTTCGTAACGCGTTACTCCCAAACAGATCCTATGATTTTGAAGTT
GCTGGCTTTACTGTTTCAAAAATTGTTTCCACTGCTGACCGCTCCTCAAATAAGCAGCGC
TGTGATGAGAAGAAGAGGAAACTGAGCGACTCTACTGCAGAAAAACCTGCAAATCCATCA
ACTGTCGATGTGGCTTCAACTACTTGCTAA