Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081942
CDS Infomation

pacid=37437947 polypeptide=PGSC0003DMP400055355 locus=PGSC0003DMG400032166 ID=PGSC0003DMT400081942.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTCTGCAGCCATTGAAGCAACTTATCCACTTTACTTCTCTCAGATTTAGACCT
TCTTCTTCTTCTTCTTCTTTCTTCATTGTTCGTTGCTGTTCTTCCACTACAACTGAAGTC
ACCGGTAGAGCCGCCGCCGGCGGTGGCCGCAACCGTAGGTCCTCTTCCGGCACCTCTACT
TCCACTTCTGATAAAGAAGCTATTCGTGCCATTCGTATCAAGAAGGTGGAAGAATTGAGA
AGCAATGGCTTGGAACCCTATGCTTACAAGTGGGATCGAACTCACAGTGCCAGTCAACTG
CAAGAAATTTATAAGAATCTGGGAAATGGTGAAGAATCAAAGAGCGAAAATGATTATGTT
TCTATATCAGGAAGAATAGTGGCTCGCAGAGCTTTTGGAAAGCTTGCTTTTTTAACTTTG
AGAGATGATTCTGGCATGATTCAGCTTTATTGTGAGAAGGAAAGGCTTCTAGGTGATCAG
TTTGACCAATTGAAGACTCTTGTTGATATTGGTGATATATTGGGTGCAAATGGTTCAATC
AAGCGCACAGAGAAAGGGGAGCTATCTGTATGCGTGAACTCATTCTCAATTCTCACTAAG
TCATTGCTTCCATTGCCGGACAAATATCATGGCTTAACAGATATAGACAAGCGCTATCGA
CAGCGGTATGTAGACATGATTGCAAATCCTGAGGTTGCTGATACCTTTCGCAAGAGGGCA
AAGATTATATCAGAAATACGTCAGTCAGTGGAATCATTTGGCTTTCTGGAAGTTGAAACA
CCTATTCTTCAGGGAGCAGCTGGTGGTGCAGAAGCTAGGCCGTTTATTACATTTCATAAT
TCTCTTGGAAGGGATCTTTATTTGAGAATTGCAACAGAGCTTCATTTGAAGAGAATGCTG
GTTGGGGGATTCGAAAAAGTTTATGAAATTGGCCGTATATTCCGCAATGAAGGCATTTCA
ACTCGTCATAATCCTGAATTCACCACCATTGAGATGTATGAAGCATACTCTGACTATGAA
AGCATGATGAATATGGCAGAAGAGATTGTGACACGATGTGCCCTTGCAGTTAATGGGAAA
CTTAAAATTGATTACCAGGGTGTGGAGATCTGCTTGGAAAGACCTTGGAGGAGGGAAACA
ATGCATAATCTTGTCAAAGAAGCTACAGGGATTGATTTTAAAAACTTCGGCGACGATCTT
AAAGCTGCTAAAGAACATACTCGTAAAGCAATTGATATTCTTGGTGATGATCTGGATAAG
AGTTCAATTGAAGCATGCTCTTCTGTTGGCCATTTGCTTAATGAGGTCTTTGAGATGGTA
GTAGAACCAAAGCTTCTACAACCGACTTTTGTCTTGGACTATCCTATTGAAATATCTCCA
CTGGCCAAACCACATAGAAGACATTCAGGCTTGACTGAGAGATTCGAGCTATTCATTTGT
GGCCGTGAGATGGCAAATGCCTTCTCAGAATTAACTGATCCTCTGGACCAGAGGAGACGC
TTGGAAGAGCAAGTGAGGCAACATAATGAGAAAAAAACCGCATCAGGTTTAAATAAGGCT
GGTGCCAAGGAACAAGAGAACAAAGATGATGATGATGACTCGTATGAAGTAACTCTTGAC
GAAGATTTCCTCACAGCTTTGGAATACGGAATGCCTCCAGCTTCTGGAATGGGACTTGGC
ATCGACAGGCTAGTAATGCTATTGACAGACTCACCTAGCATCCGCGATGTTATTGCTTTC
CCAGTCCTCAAGATTCAACAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055355
PEP Infomation

pacid=37437947 transcript=PGSC0003DMT400081942 locus=PGSC0003DMG400032166 ID=PGSC0003DMT400081942.v4.03 annot-version=v4.03
Sequence

MEALQPLKQLIHFTSLRFRPSSSSSSFFIVRCCSSTTTEVTGRAAAGGGRNRRSSSGTST
STSDKEAIRAIRIKKVEELRSNGLEPYAYKWDRTHSASQLQEIYKNLGNGEESKSENDYV
SISGRIVARRAFGKLAFLTLRDDSGMIQLYCEKERLLGDQFDQLKTLVDIGDILGANGSI
KRTEKGELSVCVNSFSILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADTFRKRA
KIISEIRQSVESFGFLEVETPILQGAAGGAEARPFITFHNSLGRDLYLRIATELHLKRML
VGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTRCALAVNGK
LKIDYQGVEICLERPWRRETMHNLVKEATGIDFKNFGDDLKAAKEHTRKAIDILGDDLDK
SSIEACSSVGHLLNEVFEMVVEPKLLQPTFVLDYPIEISPLAKPHRRHSGLTERFELFIC
GREMANAFSELTDPLDQRRRLEEQVRQHNEKKTASGLNKAGAKEQENKDDDDDSYEVTLD
EDFLTALEYGMPPASGMGLGIDRLVMLLTDSPSIRDVIAFPVLKIQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400081942
Transcript Infomation

pacid=37437947 locus=PGSC0003DMG400032166 ID=PGSC0003DMT400081942.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTCTGCAGCCATTGAAGCAACTTATCCACTTTACTTCTCTCAGATTTAGACCT
TCTTCTTCTTCTTCTTCTTTCTTCATTGTTCGTTGCTGTTCTTCCACTACAACTGAAGTC
ACCGGTAGAGCCGCCGCCGGCGGTGGCCGCAACCGTAGGTCCTCTTCCGGCACCTCTACT
TCCACTTCTGATAAAGAAGCTATTCGTGCCATTCGTATCAAGAAGGTGGAAGAATTGAGA
AGCAATGGCTTGGAACCCTATGCTTACAAGTGGGATCGAACTCACAGTGCCAGTCAACTG
CAAGAAATTTATAAGAATCTGGGAAATGGTGAAGAATCAAAGAGCGAAAATGATTATGTT
TCTATATCAGGAAGAATAGTGGCTCGCAGAGCTTTTGGAAAGCTTGCTTTTTTAACTTTG
AGAGATGATTCTGGCATGATTCAGCTTTATTGTGAGAAGGAAAGGCTTCTAGGTGATCAG
TTTGACCAATTGAAGACTCTTGTTGATATTGGTGATATATTGGGTGCAAATGGTTCAATC
AAGCGCACAGAGAAAGGGGAGCTATCTGTATGCGTGAACTCATTCTCAATTCTCACTAAG
TCATTGCTTCCATTGCCGGACAAATATCATGGCTTAACAGATATAGACAAGCGCTATCGA
CAGCGGTATGTAGACATGATTGCAAATCCTGAGGTTGCTGATACCTTTCGCAAGAGGGCA
AAGATTATATCAGAAATACGTCAGTCAGTGGAATCATTTGGCTTTCTGGAAGTTGAAACA
CCTATTCTTCAGGGAGCAGCTGGTGGTGCAGAAGCTAGGCCGTTTATTACATTTCATAAT
TCTCTTGGAAGGGATCTTTATTTGAGAATTGCAACAGAGCTTCATTTGAAGAGAATGCTG
GTTGGGGGATTCGAAAAAGTTTATGAAATTGGCCGTATATTCCGCAATGAAGGCATTTCA
ACTCGTCATAATCCTGAATTCACCACCATTGAGATGTATGAAGCATACTCTGACTATGAA
AGCATGATGAATATGGCAGAAGAGATTGTGACACGATGTGCCCTTGCAGTTAATGGGAAA
CTTAAAATTGATTACCAGGGTGTGGAGATCTGCTTGGAAAGACCTTGGAGGAGGGAAACA
ATGCATAATCTTGTCAAAGAAGCTACAGGGATTGATTTTAAAAACTTCGGCGACGATCTT
AAAGCTGCTAAAGAACATACTCGTAAAGCAATTGATATTCTTGGTGATGATCTGGATAAG
AGTTCAATTGAAGCATGCTCTTCTGTTGGCCATTTGCTTAATGAGGTCTTTGAGATGGTA
GTAGAACCAAAGCTTCTACAACCGACTTTTGTCTTGGACTATCCTATTGAAATATCTCCA
CTGGCCAAACCACATAGAAGACATTCAGGCTTGACTGAGAGATTCGAGCTATTCATTTGT
GGCCGTGAGATGGCAAATGCCTTCTCAGAATTAACTGATCCTCTGGACCAGAGGAGACGC
TTGGAAGAGCAAGTGAGGCAACATAATGAGAAAAAAACCGCATCAGGTTTAAATAAGGCT
GGTGCCAAGGAACAAGAGAACAAAGATGATGATGATGACTCGTATGAAGTAACTCTTGAC
GAAGATTTCCTCACAGCTTTGGAATACGGAATGCCTCCAGCTTCTGGAATGGGACTTGGC
ATCGACAGGCTAGTAATGCTATTGACAGACTCACCTAGCATCCGCGATGTTATTGCTTTC
CCAGTCCTCAAGATTCAACAATAA