Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081936
CDS Infomation

pacid=37440093 polypeptide=PGSC0003DMP400055349 locus=PGSC0003DMG400032163 ID=PGSC0003DMT400081936.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAATGCTAAAAGGCTAGAGGGTAAAATTGCTATCGTAACAGGAGGTGCTAGC
GGAATTGGTGAAGCTACAACAAGACTTTTCATCAAACATGGTGCAAAAGTCGTAATTGCG
GATATTCAAGACGATCTTGGTCAATCCATCATTCAAGAAATAGGCGAAAATGATGTCATC
TCTTACATGCATTGTGATGTTAAAGTGGAAAAAGATGTCGAAAATGTAGTGGACATGACG
GTCTCTAAGTACGGTAAACTTGACATCATGTTCAGCAACGCAGGAATTTCTGAAGAACTC
GATTCCACCATCTCAAAAATCGACTACGAAATTTTCAAAAACGTATTTGATGTGAACGTC
TTTGGGGCTTTAATGTGCGCCAAACATGCATCTCGTGTGATGATTCCGGCCAAAAAAGGT
AGCATTATATTCACATCGAGTATTGCGTCCGTTATGTGTGCCGGCGCGTCGCACACGTAT
TTGGCATCGAAACATGCCGTGGTAGGTCTAGCCAAGAACTTAGGTGTTGAATTAGGGCAA
CATGGAATTAGGGTTAATTGTGTTTCTCCATTTTGTGTGCCAACTCCAATGTTAAAGAAT
GGTCTTGGAATTGATGAAAAGGAAAAGATTGAGGAATTTGTGTGTGAAATTGCAAATCTT
AAAGAGACAATATTGGACGTTGAGGATGTTGCACAAGCAACATTGTATCTTGCTAGTGAT
GAATCAAAATATATAAGTGGGATGAATATTGTGATTGATGGTGGATTTAGTACTACAAAT
GTTGCTCTTAAGCAAGGCATTACCATGTTCCGTTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055349
PEP Infomation

pacid=37440093 transcript=PGSC0003DMT400081936 locus=PGSC0003DMG400032163 ID=PGSC0003DMT400081936.v4.03 annot-version=v4.03
Sequence

MASNAKRLEGKIAIVTGGASGIGEATTRLFIKHGAKVVIADIQDDLGQSIIQEIGENDVI
SYMHCDVKVEKDVENVVDMTVSKYGKLDIMFSNAGISEELDSTISKIDYEIFKNVFDVNV
FGALMCAKHASRVMIPAKKGSIIFTSSIASVMCAGASHTYLASKHAVVGLAKNLGVELGQ
HGIRVNCVSPFCVPTPMLKNGLGIDEKEKIEEFVCEIANLKETILDVEDVAQATLYLASD
ESKYISGMNIVIDGGFSTTNVALKQGITMFRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400081936
Transcript Infomation

pacid=37440093 locus=PGSC0003DMG400032163 ID=PGSC0003DMT400081936.v4.03 annot-version=v4.03
Sequence

ATGGCCTCCAATGCTAAAAGGCTAGAGGGTAAAATTGCTATCGTAACAGGAGGTGCTAGC
GGAATTGGTGAAGCTACAACAAGACTTTTCATCAAACATGGTGCAAAAGTCGTAATTGCG
GATATTCAAGACGATCTTGGTCAATCCATCATTCAAGAAATAGGCGAAAATGATGTCATC
TCTTACATGCATTGTGATGTTAAAGTGGAAAAAGATGTCGAAAATGTAGTGGACATGACG
GTCTCTAAGTACGGTAAACTTGACATCATGTTCAGCAACGCAGGAATTTCTGAAGAACTC
GATTCCACCATCTCAAAAATCGACTACGAAATTTTCAAAAACGTATTTGATGTGAACGTC
TTTGGGGCTTTAATGTGCGCCAAACATGCATCTCGTGTGATGATTCCGGCCAAAAAAGGT
AGCATTATATTCACATCGAGTATTGCGTCCGTTATGTGTGCCGGCGCGTCGCACACGTAT
TTGGCATCGAAACATGCCGTGGTAGGTCTAGCCAAGAACTTAGGTGTTGAATTAGGGCAA
CATGGAATTAGGGTTAATTGTGTTTCTCCATTTTGTGTGCCAACTCCAATGTTAAAGAAT
GGTCTTGGAATTGATGAAAAGGAAAAGATTGAGGAATTTGTGTGTGAAATTGCAAATCTT
AAAGAGACAATATTGGACGTTGAGGATGTTGCACAAGCAACATTGTATCTTGCTAGTGAT
GAATCAAAATATATAAGTGGGATGAATATTGTGATTGATGGTGGATTTAGTACTACAAAT
GTTGCTCTTAAGCAAGGCATTACCATGTTCCGTTCTTAA