Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081916
CDS Infomation

pacid=37438366 polypeptide=PGSC0003DMP400055330 locus=PGSC0003DMG402032158 ID=PGSC0003DMT400081916.v4.03 annot-version=v4.03
Sequence

ATGACACAAACTTCTTCACAATTAAGTCCACCACATGAAGCTATGTTCTTGATCTTGCCT
TATCTCCCTTTATATGAACTTTTATCAATGAGTCAAGTTTGCAAGTCATTTAGAGATGCT
CTAAAACATGATATACTCCCATGGTTGAATGTCATCGTCGAAAAACCGATAAATACTCGA
TTTTCTGATGATTTTTTGGTGAAAATAATGTCTAAGGCAAAGGGTAGAATGAATATTGTT
GCTCTGAGAAATTGCTTTAAGATAACAGATGAAGGGCTTTTACAAGTTATTGCTAGTAAT
CCTTTTATCAACAAGCTATATTTACAAGGGTGCACTAGCTTAACCATTGAGGGAGTCATT
GGTGCAGTAAAATTACTCACCAAACCAAACCATAAGCTAAAAAACTTAGCTATTTCTGGC
ATCTACAATGTGAAAATAGAAGATTTTCAAACACTTTGTTATCTAATGGGAATAAATCAA
ATGCAAATGAAACAAATAAAGAAGAATTACTATCACATGAGATGCGAATTATACACGTTT
AAACAAGAATCTCAGCCTTCAATCGACGTAGATATATGTCCAAAATGTGGTGAAATAAGA
GAAGTTTTTGATTGTCCAAGAGATTCTTGTAAGAAGAGAATGCAACAACAACAAAGGCAA
CTTCTTATAGAGTGCAGGGGTTGCTTCCTTTGTGTCCCAAGATGTGAGGAGTGTGGTGTA
TGCACCAAAGATGAAGAATTAGGTGAAGCAGCTTGTGTAGACATATTGTGCTTAAATTGT
TGGCTTCATCTTCCAAAATGTAGTTTTTGTAACAAGGCATATTGCAACCAGCATGCTTAC
CAACAACATGTTGGCTCTTCTTTAGGGTTCTTGTGTAGTGAGTGTAGTTTTCAATCAACA
CAAAGTTCACATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055330
PEP Infomation

pacid=37438366 transcript=PGSC0003DMT400081916 locus=PGSC0003DMG402032158 ID=PGSC0003DMT400081916.v4.03 annot-version=v4.03
Sequence

MTQTSSQLSPPHEAMFLILPYLPLYELLSMSQVCKSFRDALKHDILPWLNVIVEKPINTR
FSDDFLVKIMSKAKGRMNIVALRNCFKITDEGLLQVIASNPFINKLYLQGCTSLTIEGVI
GAVKLLTKPNHKLKNLAISGIYNVKIEDFQTLCYLMGINQMQMKQIKKNYYHMRCELYTF
KQESQPSIDVDICPKCGEIREVFDCPRDSCKKRMQQQQRQLLIECRGCFLCVPRCEECGV
CTKDEELGEAACVDILCLNCWLHLPKCSFCNKAYCNQHAYQQHVGSSLGFLCSECSFQST
QSSH*

Transcript Sequence

Transcript ID

PGSC0003DMT400081916
Transcript Infomation

pacid=37438366 locus=PGSC0003DMG402032158 ID=PGSC0003DMT400081916.v4.03 annot-version=v4.03
Sequence

ATGACACAAACTTCTTCACAATTAAGTCCACCACATGAAGCTATGTTCTTGATCTTGCCT
TATCTCCCTTTATATGAACTTTTATCAATGAGTCAAGTTTGCAAGTCATTTAGAGATGCT
CTAAAACATGATATACTCCCATGGTTGAATGTCATCGTCGAAAAACCGATAAATACTCGA
TTTTCTGATGATTTTTTGGTGAAAATAATGTCTAAGGCAAAGGGTAGAATGAATATTGTT
GCTCTGAGAAATTGCTTTAAGATAACAGATGAAGGGCTTTTACAAGTTATTGCTAGTAAT
CCTTTTATCAACAAGCTATATTTACAAGGGTGCACTAGCTTAACCATTGAGGGAGTCATT
GGTGCAGTAAAATTACTCACCAAACCAAACCATAAGCTAAAAAACTTAGCTATTTCTGGC
ATCTACAATGTGAAAATAGAAGATTTTCAAACACTTTGTTATCTAATGGGAATAAATCAA
ATGCAAATGAAACAAATAAAGAAGAATTACTATCACATGAGATGCGAATTATACACGTTT
AAACAAGAATCTCAGCCTTCAATCGACGTAGATATATGTCCAAAATGTGGTGAAATAAGA
GAAGTTTTTGATTGTCCAAGAGATTCTTGTAAGAAGAGAATGCAACAACAACAAAGGCAA
CTTCTTATAGAGTGCAGGGGTTGCTTCCTTTGTGTCCCAAGATGTGAGGAGTGTGGTGTA
TGCACCAAAGATGAAGAATTAGGTGAAGCAGCTTGTGTAGACATATTGTGCTTAAATTGT
TGGCTTCATCTTCCAAAATGTAGTTTTTGTAACAAGGCATATTGCAACCAGCATGCTTAC
CAACAACATGTTGGCTCTTCTTTAGGGTTCTTGTGTAGTGAGTGTAGTTTTCAATCAACA
CAAAGTTCACATTAG