Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081899
CDS Infomation

pacid=37440968 polypeptide=PGSC0003DMP400055315 locus=PGSC0003DMG400032150 ID=PGSC0003DMT400081899.v4.03 annot-version=v4.03
Sequence

ATGGAAAGTTCTGTAGCTGCAGAAAATGATAGTAATCCCCCAGAGGATGATGTGAAGGAG
AGGTGTTGGGACCAAAGAGAGGCGCTTCCGGGTGAGCCTCGATGTGTCATATGTGGCCGC
TATGGTGAGTACATTTGTGATGAAACTGATGATGATATTTGCAGCTTGGAATGCAAAGGT
ATATTGTTGTCGCGGCTTGCAAAATCGCGGCAACCAACTGCTCGTCCATGTCCTGTGAAG
TTACCAGCAACTGATGAGTGCTATTATGTAAGGGATAATGATAAATCTGAAGTGAATCCA
CTAACAACTGACCAGACTGAACTTCTGAGAAGGAAACTTGATATTCTTGTGAAGGGAGAT
ACTACACCGCCTCCCATCTTGTCATTTGCTTCTTGCAAGCTACCTCAGAAGCTTCTCGAG
AATATTGAAGTTGCTGGTTATGAAATGCCAACTCCCGTCCAGATGCAAGCAATCCCTGCT
GCTTTAGCACGGCAAAGCTTGCTTGTTTCAGCAGAGACTGGTTCTGGTAAAACTGGCTCT
TTTCTAATTCCTATTGTTTCTCAGTGTGCAAAATTCAATGAAGAGCATTTCCAAAACCAG
CAACAACCATTAGCTATGGTTCTCACACCTACTAGAGAACTCTGCATACAGGTAGAGGAC
CAAGCTAAGGTGCTCGGGAAGGGTTTGCCATTCAAAACTGCGTTGGTGGTAGGTGGTGAT
GCCATGGCAGGACAGCTCCACCGCATCCAGCAGGGAGTATCTTTAATTGTGGGAACTCCT
GGAAGGCTCATTGACCTTTTAACGAAACACGAGATTGAACTGGATACTATTTCAATTCTT
GTTCTTGATGAAGTTGATTGCATGCTCCAAAGAGGTTTCCGTGAGCAGGTGATGCAGATT
TTTACGGCTCTGTCTCAACCCCAAGTGTTAATGTATTCCGCTACAATTCCTAAAGACGTA
GAGAAGATGGCAAGCTCAATGGCGAAAAAGGTTACTGTCATCTCTGTTGGGAAGCCAAAT
AAACCTAATCAGGCTGTCAAGCAGTTAGCTATTTGGGTAGACTCGAAACGGAAGAAGCAA
AAGCTTTTTGATATTTTGATGAGCAAGCAGCATTACAAGCCACCAGTTATTATATTTGTG
GATTCTAGACTCGGAGCAGATCTCCTTTCTGAAGCAATAACAGTAAGTACTGGGCTAAAA
GCATTATCAATTCATGGTGAGAAATCCATGAAGGATAGGAGAGAAATTGTAAGGTCATTT
CTAGTTGGAGAAATTCCAGTTATTGTGGCCACAGGAGTGTTGGGTCGAGGAATCGATCTG
TTGACTGTGAAACAGGTTATTGTGTTTGATATGCCAAATTCCATCAAGGAGTATGTGCAC
CAGGTGGGAAGGGCATCCAGAATGGGGGAGGAAGGTACATCAATTGTCTTTGTGAATGAA
GAGAACAAGAAATTGTTTCCCCAGTTGGTTGAAGCTCTTAAAACATCTGGTGCTGCAATT
CCCCGAGAGCTTGCTAATTCACGGTATTCTGTTGCCTCTTCCTCTACTGGCAGAGGTCAG
AAAAAACGAAAACATGGTTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055315
PEP Infomation

pacid=37440968 transcript=PGSC0003DMT400081899 locus=PGSC0003DMG400032150 ID=PGSC0003DMT400081899.v4.03 annot-version=v4.03
Sequence

MESSVAAENDSNPPEDDVKERCWDQREALPGEPRCVICGRYGEYICDETDDDICSLECKG
ILLSRLAKSRQPTARPCPVKLPATDECYYVRDNDKSEVNPLTTDQTELLRRKLDILVKGD
TTPPPILSFASCKLPQKLLENIEVAGYEMPTPVQMQAIPAALARQSLLVSAETGSGKTGS
FLIPIVSQCAKFNEEHFQNQQQPLAMVLTPTRELCIQVEDQAKVLGKGLPFKTALVVGGD
AMAGQLHRIQQGVSLIVGTPGRLIDLLTKHEIELDTISILVLDEVDCMLQRGFREQVMQI
FTALSQPQVLMYSATIPKDVEKMASSMAKKVTVISVGKPNKPNQAVKQLAIWVDSKRKKQ
KLFDILMSKQHYKPPVIIFVDSRLGADLLSEAITVSTGLKALSIHGEKSMKDRREIVRSF
LVGEIPVIVATGVLGRGIDLLTVKQVIVFDMPNSIKEYVHQVGRASRMGEEGTSIVFVNE
ENKKLFPQLVEALKTSGAAIPRELANSRYSVASSSTGRGQKKRKHGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400081899
Transcript Infomation

pacid=37440968 locus=PGSC0003DMG400032150 ID=PGSC0003DMT400081899.v4.03 annot-version=v4.03
Sequence

ATGGAAAGTTCTGTAGCTGCAGAAAATGATAGTAATCCCCCAGAGGATGATGTGAAGGAG
AGGTGTTGGGACCAAAGAGAGGCGCTTCCGGGTGAGCCTCGATGTGTCATATGTGGCCGC
TATGGTGAGTACATTTGTGATGAAACTGATGATGATATTTGCAGCTTGGAATGCAAAGGT
ATATTGTTGTCGCGGCTTGCAAAATCGCGGCAACCAACTGCTCGTCCATGTCCTGTGAAG
TTACCAGCAACTGATGAGTGCTATTATGTAAGGGATAATGATAAATCTGAAGTGAATCCA
CTAACAACTGACCAGACTGAACTTCTGAGAAGGAAACTTGATATTCTTGTGAAGGGAGAT
ACTACACCGCCTCCCATCTTGTCATTTGCTTCTTGCAAGCTACCTCAGAAGCTTCTCGAG
AATATTGAAGTTGCTGGTTATGAAATGCCAACTCCCGTCCAGATGCAAGCAATCCCTGCT
GCTTTAGCACGGCAAAGCTTGCTTGTTTCAGCAGAGACTGGTTCTGGTAAAACTGGCTCT
TTTCTAATTCCTATTGTTTCTCAGTGTGCAAAATTCAATGAAGAGCATTTCCAAAACCAG
CAACAACCATTAGCTATGGTTCTCACACCTACTAGAGAACTCTGCATACAGGTAGAGGAC
CAAGCTAAGGTGCTCGGGAAGGGTTTGCCATTCAAAACTGCGTTGGTGGTAGGTGGTGAT
GCCATGGCAGGACAGCTCCACCGCATCCAGCAGGGAGTATCTTTAATTGTGGGAACTCCT
GGAAGGCTCATTGACCTTTTAACGAAACACGAGATTGAACTGGATACTATTTCAATTCTT
GTTCTTGATGAAGTTGATTGCATGCTCCAAAGAGGTTTCCGTGAGCAGGTGATGCAGATT
TTTACGGCTCTGTCTCAACCCCAAGTGTTAATGTATTCCGCTACAATTCCTAAAGACGTA
GAGAAGATGGCAAGCTCAATGGCGAAAAAGGTTACTGTCATCTCTGTTGGGAAGCCAAAT
AAACCTAATCAGGCTGTCAAGCAGTTAGCTATTTGGGTAGACTCGAAACGGAAGAAGCAA
AAGCTTTTTGATATTTTGATGAGCAAGCAGCATTACAAGCCACCAGTTATTATATTTGTG
GATTCTAGACTCGGAGCAGATCTCCTTTCTGAAGCAATAACAGTAAGTACTGGGCTAAAA
GCATTATCAATTCATGGTGAGAAATCCATGAAGGATAGGAGAGAAATTGTAAGGTCATTT
CTAGTTGGAGAAATTCCAGTTATTGTGGCCACAGGAGTGTTGGGTCGAGGAATCGATCTG
TTGACTGTGAAACAGGTTATTGTGTTTGATATGCCAAATTCCATCAAGGAGTATGTGCAC
CAGGTGGGAAGGGCATCCAGAATGGGGGAGGAAGGTACATCAATTGTCTTTGTGAATGAA
GAGAACAAGAAATTGTTTCCCCAGTTGGTTGAAGCTCTTAAAACATCTGGTGCTGCAATT
CCCCGAGAGCTTGCTAATTCACGGTATTCTGTTGCCTCTTCCTCTACTGGCAGAGGTCAG
AAAAAACGAAAACATGGTTTCTGA