Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081882
CDS Infomation

pacid=37439311 polypeptide=PGSC0003DMP400055304 locus=PGSC0003DMG400032146 ID=PGSC0003DMT400081882.v4.03 annot-version=v4.03
Sequence

ATGTCAGCATTTGCCTCCTATATTTGCTGTCTATTTTTTTCTCTGAGCAGTTTCCTTTCC
ACCTGGTGCTCTAAGGTTGTGACATGTGTCCGCCAACCATCACAAGGACCAACATTCGGA
ATCAAGGGTGGTGCTGCAGGAGGCGGTTACAGTCAAGTGATACCAATGGATGAGTTCAAT
CTTCACCTAACAGGAGATATTCATGCAATAACAGCAGCAAATAACCTTTTGGCTGCTGCG
ATTGATACACGAATCTTCCATGAATCTACGCAGTCTGACAAGGCTCTCTTTAACAGGTTA
TGCCCGCCAAATAAAGAAGGTAAACGGAAGTTCTGTGACATTATGTTTAGGCGTTTGAAG
AAACTTGGTATTGATAAGACGGCCCCCGAAGACCTTACTCCTGAAGAGAGCAGTAAATTT
GCTAGGCTAGATATAGATCCTGCTTCCGTCACATGGAGAAGAGTCATGGATGTCAACGAT
AGGTTTTTGAGAAAAATTACCATAGGTCAGGGACCTGAAGAGAAGGGGATGGTGCGGGAG
ACAGCATTTGATATTTCAGTTGCTAGTGAAATAATGGCAGTTCTAGCCCTCACGACATCA
CTAGCTGATATGCGAGAGAGGCTGGGAAAAATGGTAGTCGGGAATAGCAAGGCCGGTGAT
CCAGTTACAGCTGATGATCTTGGGGTTGGAGGCGCTTTGACTGTTTTGATGAAAGATGCC
ATTAATCCTACTCTTATGCAGACTCTTGAGGGCACCCCTGTTCTTGTTCATGCCGGTCCG
TTTGCAAATATTGCTCATGGAAATTCATCTATTGTTGCTGACAAGATTGCATTAAAGCTC
GTAGGACCTGGTGGCTTTGTGGTCACAGAGGCTGGCTTTGGTTCTGATATTGGGACAGAG
AAGTTTATGAACATCAAATGTCGATATAGTGGCTTGAAACCACAGTGCGCTGTTATTGTG
GCCACAGTAAGAGCCCTTAAAATGCATGGTGGAGGACCTCAAGTCACAGCTGGAAGGCCT
CTCGACAAGGCCTATGTAACTGAGAATCTCGGACTAGTGGAAGCTGGTTGTGTGAATCTG
GCTAGGCATATTTCAAATACAAAAGCTTATGGTGTAAATGTTGTGGTTGCCGTCAATGCG
TTCTCAACTGATACTGAAGCAGAACTAAATGCAGTTAAAAATGCTGCATTAGCTGCAGGA
GCATTTGATTCTGTAATTTGTACTCATCATGCCCATGGTGGCAAAGGAGCGGTGGACCTC
GGAATCGCAGTTCAGAAGGCCTGTGAGAATGCAACACAGTCACTAAAATTCCTGTACCCG
CTGGATATAGGTATCAAAGATAAAATAGAGGCAATAGCAAAATCATATGGTGCTGATGGA
GTAGAGTACTCTGAAGAGGCTGAGAAGCAGATTGAGATGTATACCAAACAAGGTTTTACA
AATCTGCCAATTTGCATGGCGAAAACACAATATTCATTTTCACATGATGCCGGGAAGAAG
GGCGCTCCTAGTGGATTCATCCTTCCCATCAGGGACGTTAGAGCAAGCATTGGCGCGGGA
TTCATTTATCCTCTTGTTGGAACAATGAGCACAATGCCTGGTTTGCCTACTAGGCCTTGT
TTCTACGAGATTGACATTGACACGTCTACTGGAAAGGTAATCGGTCTTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055304
PEP Infomation

pacid=37439311 transcript=PGSC0003DMT400081882 locus=PGSC0003DMG400032146 ID=PGSC0003DMT400081882.v4.03 annot-version=v4.03
Sequence

MSAFASYICCLFFSLSSFLSTWCSKVVTCVRQPSQGPTFGIKGGAAGGGYSQVIPMDEFN
LHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPNKEGKRKFCDIMFRRLK
KLGIDKTAPEDLTPEESSKFARLDIDPASVTWRRVMDVNDRFLRKITIGQGPEEKGMVRE
TAFDISVASEIMAVLALTTSLADMRERLGKMVVGNSKAGDPVTADDLGVGGALTVLMKDA
INPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGSDIGTE
KFMNIKCRYSGLKPQCAVIVATVRALKMHGGGPQVTAGRPLDKAYVTENLGLVEAGCVNL
ARHISNTKAYGVNVVVAVNAFSTDTEAELNAVKNAALAAGAFDSVICTHHAHGGKGAVDL
GIAVQKACENATQSLKFLYPLDIGIKDKIEAIAKSYGADGVEYSEEAEKQIEMYTKQGFT
NLPICMAKTQYSFSHDAGKKGAPSGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPC
FYEIDIDTSTGKVIGLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400081882
Transcript Infomation

pacid=37439311 locus=PGSC0003DMG400032146 ID=PGSC0003DMT400081882.v4.03 annot-version=v4.03
Sequence

ATGTCAGCATTTGCCTCCTATATTTGCTGTCTATTTTTTTCTCTGAGCAGTTTCCTTTCC
ACCTGGTGCTCTAAGGTTGTGACATGTGTCCGCCAACCATCACAAGGACCAACATTCGGA
ATCAAGGGTGGTGCTGCAGGAGGCGGTTACAGTCAAGTGATACCAATGGATGAGTTCAAT
CTTCACCTAACAGGAGATATTCATGCAATAACAGCAGCAAATAACCTTTTGGCTGCTGCG
ATTGATACACGAATCTTCCATGAATCTACGCAGTCTGACAAGGCTCTCTTTAACAGGTTA
TGCCCGCCAAATAAAGAAGGTAAACGGAAGTTCTGTGACATTATGTTTAGGCGTTTGAAG
AAACTTGGTATTGATAAGACGGCCCCCGAAGACCTTACTCCTGAAGAGAGCAGTAAATTT
GCTAGGCTAGATATAGATCCTGCTTCCGTCACATGGAGAAGAGTCATGGATGTCAACGAT
AGGTTTTTGAGAAAAATTACCATAGGTCAGGGACCTGAAGAGAAGGGGATGGTGCGGGAG
ACAGCATTTGATATTTCAGTTGCTAGTGAAATAATGGCAGTTCTAGCCCTCACGACATCA
CTAGCTGATATGCGAGAGAGGCTGGGAAAAATGGTAGTCGGGAATAGCAAGGCCGGTGAT
CCAGTTACAGCTGATGATCTTGGGGTTGGAGGCGCTTTGACTGTTTTGATGAAAGATGCC
ATTAATCCTACTCTTATGCAGACTCTTGAGGGCACCCCTGTTCTTGTTCATGCCGGTCCG
TTTGCAAATATTGCTCATGGAAATTCATCTATTGTTGCTGACAAGATTGCATTAAAGCTC
GTAGGACCTGGTGGCTTTGTGGTCACAGAGGCTGGCTTTGGTTCTGATATTGGGACAGAG
AAGTTTATGAACATCAAATGTCGATATAGTGGCTTGAAACCACAGTGCGCTGTTATTGTG
GCCACAGTAAGAGCCCTTAAAATGCATGGTGGAGGACCTCAAGTCACAGCTGGAAGGCCT
CTCGACAAGGCCTATGTAACTGAGAATCTCGGACTAGTGGAAGCTGGTTGTGTGAATCTG
GCTAGGCATATTTCAAATACAAAAGCTTATGGTGTAAATGTTGTGGTTGCCGTCAATGCG
TTCTCAACTGATACTGAAGCAGAACTAAATGCAGTTAAAAATGCTGCATTAGCTGCAGGA
GCATTTGATTCTGTAATTTGTACTCATCATGCCCATGGTGGCAAAGGAGCGGTGGACCTC
GGAATCGCAGTTCAGAAGGCCTGTGAGAATGCAACACAGTCACTAAAATTCCTGTACCCG
CTGGATATAGGTATCAAAGATAAAATAGAGGCAATAGCAAAATCATATGGTGCTGATGGA
GTAGAGTACTCTGAAGAGGCTGAGAAGCAGATTGAGATGTATACCAAACAAGGTTTTACA
AATCTGCCAATTTGCATGGCGAAAACACAATATTCATTTTCACATGATGCCGGGAAGAAG
GGCGCTCCTAGTGGATTCATCCTTCCCATCAGGGACGTTAGAGCAAGCATTGGCGCGGGA
TTCATTTATCCTCTTGTTGGAACAATGAGCACAATGCCTGGTTTGCCTACTAGGCCTTGT
TTCTACGAGATTGACATTGACACGTCTACTGGAAAGGTAATCGGTCTTTCTTGA