Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081879
CDS Infomation

pacid=37437584 polypeptide=PGSC0003DMP400055301 locus=PGSC0003DMG400032144 ID=PGSC0003DMT400081879.v4.03 annot-version=v4.03
Sequence

ATGCCTAAAAAATCCCAGTTTAGTAGAAGCTCATCTGATTCAGATTCCCCAAGAAAAAAT
CTTGGTTCTTCTGTTTCTACAGAGCCAGGACCAGGACCAAGCAGTAGTAGCAGCAGCTGT
AAGGTTAATAATAAATCTTCTGTTTGGTCTGGTTTATTGGTTTCTCCTTTTTCAATATTT
GATAGTGAGCCAAAAGGGTGTTTGAAAAAGGGGGAATTTTGTTGTTCAAAGAAGTATAAT
GGTATTGTTGGTATTGGTTGGACTAGTGCTGTGAAAAGAATGATAAACAGTGGCTCAATG
AGGAGGATTTTTGGGATGGACAAAACTGGGATTCCTAATGGGTCTAAGAGTGATATTTGG
CTTTTGGGTGTTTGCTATAAAGTTGTTCAAGATGATGATTCATCCATAGAACCAACTCAA
AGTGAAGGTTTTTCTGCTTTTGTTGATGATTTCTCATCTAGGATTCTTGTCACATATCGT
AAAGGTTTTGCTCCTATTGGAGATACTAAGTATACCAGTGATGTTAATTGGGGTTGCATG
CTTAGGAGCAGTCAGATGCTTGTTGCTCAGGCTTTACTTCTTCATCGATTAGGAAGATCG
TGGAGAAAATCTATGGACAAGGTACTTGAAAGTCAAAACACTGCAGTACTTTCAGTTGTT
AAAATGCTCAATTTCCAATTTAAAACAACGATAATGCACAATCAGCCGCTTGAAGAAAAG
TATGTGGAGATTTTGCACCTCTTTGGTGATTCTGAGGGGTCAGCTTACTCTATCCATAAC
CTCCTGCAAGCCGGCAAGACTTATGGTCTTTCTCCTGGTTCATGGGTGGGTCCGTATGCA
ATGTGTCGCACCTGGGAAACATTAGCACGCAGCAAAAGAGAAGAAACAGGAAATGCAGAC
GTTTCTCCGGCAATGGCTATCTATGTTGTATCTGGGGATGAAGATGGAGAAAGAGGTGGA
GCACCAGTGCTCTGCATTGAGGACATTGTCAAACATTGTTCCGGCTTGTCAAAAGGCGAA
GTTGACTGGACACCTGTTGTTTTCTTAGTTCCATTGGTTCTTGGACTTGACAAAATCAAT
TCAAGGTATCTTCCTTTACTGGCAGCTACATTTAGTTTTCCTCAAAGCCTTGGGATCCTA
GGTGGCAGACCTGGAGCGTCAACTTACATTATTGGCGTGCAAGATGATAAAGCCTTTTAT
CTTGATCCACATGAAGTTCAGCCAGTTGTTGATATTAAAATGGATAAGCTAGATGTTGAT
ACTTCATCTTATCACTGCAATACTGTTAGGCATTTTCCGCTGGATTCAATTGATCCCTCC
TTGGCTATTGGATTTTATTGTAGAGATAAAAGTGATTTTGATGATTTTTGTATACGGGCA
TCTGAGCTAGTAGATCAATCAAACGGTGCTCCATTGTTTACCATAACTGCAACTCGTAGC
TCTGCCACATCAGTCGAGTACAATGACAGGTTGACTAGTGATACTGGAGTCCCGGAACTG
GACTCCTTCGATGCTGGTGCCCCCGGTGAATCAGATGGTAGTAGTAGACCTGAAGATGAG
TGGCAACTCCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055301
PEP Infomation

pacid=37437584 transcript=PGSC0003DMT400081879 locus=PGSC0003DMG400032144 ID=PGSC0003DMT400081879.v4.03 annot-version=v4.03
Sequence

MPKKSQFSRSSSDSDSPRKNLGSSVSTEPGPGPSSSSSSCKVNNKSSVWSGLLVSPFSIF
DSEPKGCLKKGEFCCSKKYNGIVGIGWTSAVKRMINSGSMRRIFGMDKTGIPNGSKSDIW
LLGVCYKVVQDDDSSIEPTQSEGFSAFVDDFSSRILVTYRKGFAPIGDTKYTSDVNWGCM
LRSSQMLVAQALLLHRLGRSWRKSMDKVLESQNTAVLSVVKMLNFQFKTTIMHNQPLEEK
YVEILHLFGDSEGSAYSIHNLLQAGKTYGLSPGSWVGPYAMCRTWETLARSKREETGNAD
VSPAMAIYVVSGDEDGERGGAPVLCIEDIVKHCSGLSKGEVDWTPVVFLVPLVLGLDKIN
SRYLPLLAATFSFPQSLGILGGRPGASTYIIGVQDDKAFYLDPHEVQPVVDIKMDKLDVD
TSSYHCNTVRHFPLDSIDPSLAIGFYCRDKSDFDDFCIRASELVDQSNGAPLFTITATRS
SATSVEYNDRLTSDTGVPELDSFDAGAPGESDGSSRPEDEWQLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400081879
Transcript Infomation

pacid=37437584 locus=PGSC0003DMG400032144 ID=PGSC0003DMT400081879.v4.03 annot-version=v4.03
Sequence

ATGCCTAAAAAATCCCAGTTTAGTAGAAGCTCATCTGATTCAGATTCCCCAAGAAAAAAT
CTTGGTTCTTCTGTTTCTACAGAGCCAGGACCAGGACCAAGCAGTAGTAGCAGCAGCTGT
AAGGTTAATAATAAATCTTCTGTTTGGTCTGGTTTATTGGTTTCTCCTTTTTCAATATTT
GATAGTGAGCCAAAAGGGTGTTTGAAAAAGGGGGAATTTTGTTGTTCAAAGAAGTATAAT
GGTATTGTTGGTATTGGTTGGACTAGTGCTGTGAAAAGAATGATAAACAGTGGCTCAATG
AGGAGGATTTTTGGGATGGACAAAACTGGGATTCCTAATGGGTCTAAGAGTGATATTTGG
CTTTTGGGTGTTTGCTATAAAGTTGTTCAAGATGATGATTCATCCATAGAACCAACTCAA
AGTGAAGGTTTTTCTGCTTTTGTTGATGATTTCTCATCTAGGATTCTTGTCACATATCGT
AAAGGTTTTGCTCCTATTGGAGATACTAAGTATACCAGTGATGTTAATTGGGGTTGCATG
CTTAGGAGCAGTCAGATGCTTGTTGCTCAGGCTTTACTTCTTCATCGATTAGGAAGATCG
TGGAGAAAATCTATGGACAAGGTACTTGAAAGTCAAAACACTGCAGTACTTTCAGTTGTT
AAAATGCTCAATTTCCAATTTAAAACAACGATAATGCACAATCAGCCGCTTGAAGAAAAG
TATGTGGAGATTTTGCACCTCTTTGGTGATTCTGAGGGGTCAGCTTACTCTATCCATAAC
CTCCTGCAAGCCGGCAAGACTTATGGTCTTTCTCCTGGTTCATGGGTGGGTCCGTATGCA
ATGTGTCGCACCTGGGAAACATTAGCACGCAGCAAAAGAGAAGAAACAGGAAATGCAGAC
GTTTCTCCGGCAATGGCTATCTATGTTGTATCTGGGGATGAAGATGGAGAAAGAGGTGGA
GCACCAGTGCTCTGCATTGAGGACATTGTCAAACATTGTTCCGGCTTGTCAAAAGGCGAA
GTTGACTGGACACCTGTTGTTTTCTTAGTTCCATTGGTTCTTGGACTTGACAAAATCAAT
TCAAGGTATCTTCCTTTACTGGCAGCTACATTTAGTTTTCCTCAAAGCCTTGGGATCCTA
GGTGGCAGACCTGGAGCGTCAACTTACATTATTGGCGTGCAAGATGATAAAGCCTTTTAT
CTTGATCCACATGAAGTTCAGCCAGTTGTTGATATTAAAATGGATAAGCTAGATGTTGAT
ACTTCATCTTATCACTGCAATACTGTTAGGCATTTTCCGCTGGATTCAATTGATCCCTCC
TTGGCTATTGGATTTTATTGTAGAGATAAAAGTGATTTTGATGATTTTTGTATACGGGCA
TCTGAGCTAGTAGATCAATCAAACGGTGCTCCATTGTTTACCATAACTGCAACTCGTAGC
TCTGCCACATCAGTCGAGTACAATGACAGGTTGACTAGTGATACTGGAGTCCCGGAACTG
GACTCCTTCGATGCTGGTGCCCCCGGTGAATCAGATGGTAGTAGTAGACCTGAAGATGAG
TGGCAACTCCTTTGA