Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081862
CDS Infomation

pacid=37437675 polypeptide=PGSC0003DMP400055290 locus=PGSC0003DMG400032140 ID=PGSC0003DMT400081862.v4.03 annot-version=v4.03
Sequence

ATGCAGATCAAAGAACATCCCGGGTACAATTTTATTGGTTTGATTTTTGGTCCTGCTCAT
AAGCAACTGGAAAAGGAAACTGGAGCTCAAGTAAAGGTTTATGGTATTAAAGCAGATACT
GAAGAGAAGGTAGAAGTTACTTCTGGTGAAAATGACTCTGGTGCTTATGAGGAAATGCAT
GTCCAAGTATCAGCGGAGACATATGAAAAGGTTGATGCTGCAGTTGCTTTAATTGAACTT
CTGGTTACCCCAGCTTCAATGACTCCTGCGGCCACAACCACAAAAGCCTCAGGTGATGGA
GAAACTATTTCCGTTGAAGCAACACCTGTCCCGACTCCTCCTCCTGTAGTAAATCAAGGG
ATAGCTCAACCAGGTTTTGGAGCACAACCTGCTCAACTTCAAAGTCATTTTCAGCCATAC
CAAGGGCAATGGTTTCCTGGACCGACATCTCAGAATCCAGTACCTCGATTTCCAGGACCC
GCTAACTCTGGGATTTCTTCAGCATCCCTGGTCAGCAACACTCACCAAGTATCACCGTCA
CCTACCAACTTGTCAAATACATCCTCACCCTTTGGTCCACCACATGGTATGCAAGATGGC
TTTGGTTCAGTTCCTCGAAACCCTTTTGTTCACTCTAGCCCACAGGCACCACTAATGCAG
CAGCAATATATGCCTTCTTCTCATTTTGGACAAATTGGTGGACTTAGACATCCTATACCA
TCTTTAGGGTCTACACCACCTCAATCCAATATGACTCTGCCTCAATTTTCTCAGGGCCAA
CCGAGTCCAACAGGGTTTCCGCAAATTGTCAGACCAGTAATGTCTTCATTACCTCAGTCT
GGCCCTCCTACAGCATATCCAGACCGACCATTGACCCCAGCTGGAAACTCCCCTGGATGG
TCACAGTTGCCATGGAACAACCAGACAGGTCAAGGTCCAAGCAACATGATTGCCATGGCT
CCCCCCACAGTTTCCCCTCAAGGAAGTCATCATCTTGCTTCACGCCCAATGGGTGTCTCT
GCAGCTCCGCATATAGATGTTTTCCAGGGCCATAATTTAGCACCCCAATCATCTGGACCA
TCTCCATCAGCACATATGCCTCCTCCATTGCGTCCATCTTCAGGATCTACCCCTGCACAT
TTCTTGAACCACTCTGTGTCTAGTGGACAACCAATCAATCCAAATCTCTCACCTAATCCA
GTTCCCGTAAGTTCTCTTAATATTAATTCTATGAGACCTACTTCCTTTGTAACTCCAAAT
CCACTGCAGCCCAATAGCGATTTTACATTCCAGCCTCACCATTCACAGAATCCAGCAGCT
TCCAGGCTAATTAGTCAATTTGGATCTCAGGAACTTTCACCTTCAAACCAAATGATGCGC
CCTCATCAACGACCAGCAATAGACAATCCAAATCTCCCACTTGTCATTCAAGGATTTCAA
AGACCCCAATTAAGCAATCAGATTAGTCAGCCAGGACCACCTATGTCACTTGACTTTGCT
CGAGGACCTGCTGGTCCTGTCCCTCAATTTAGGCATCCGACATTTTCAAATCAGGGTATA
GCTTCACCTACTGTCCCTCAAATGCAACCTATGAACTTTAGGCCAGCTCCAAATCATGTA
GGTTCCTTCCCTCCTAGAGTGAACTCCATGCCTCTTCAGCAAAATAATCCAAATGTCATG
CTTCGACCACAGAACTTTGAGGCTCCCAACAATGTCTTCTTCCGTCATGGTAGGCCTGCC
TCTGGAGCGCATCAAATATATGACCCCTTCTCGCCCACATCTGTCCCTCGACATCCTCAT
CCTGGTGGTAATCCAGCAATGGCAGAAAAACAAGAGAGTGATCCTGAATATGAAGACTTG
ATGGCCTCTGTTGGAGTTAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400055290
PEP Infomation

pacid=37437675 transcript=PGSC0003DMT400081862 locus=PGSC0003DMG400032140 ID=PGSC0003DMT400081862.v4.03 annot-version=v4.03
Sequence

MQIKEHPGYNFIGLIFGPAHKQLEKETGAQVKVYGIKADTEEKVEVTSGENDSGAYEEMH
VQVSAETYEKVDAAVALIELLVTPASMTPAATTTKASGDGETISVEATPVPTPPPVVNQG
IAQPGFGAQPAQLQSHFQPYQGQWFPGPTSQNPVPRFPGPANSGISSASLVSNTHQVSPS
PTNLSNTSSPFGPPHGMQDGFGSVPRNPFVHSSPQAPLMQQQYMPSSHFGQIGGLRHPIP
SLGSTPPQSNMTLPQFSQGQPSPTGFPQIVRPVMSSLPQSGPPTAYPDRPLTPAGNSPGW
SQLPWNNQTGQGPSNMIAMAPPTVSPQGSHHLASRPMGVSAAPHIDVFQGHNLAPQSSGP
SPSAHMPPPLRPSSGSTPAHFLNHSVSSGQPINPNLSPNPVPVSSLNINSMRPTSFVTPN
PLQPNSDFTFQPHHSQNPAASRLISQFGSQELSPSNQMMRPHQRPAIDNPNLPLVIQGFQ
RPQLSNQISQPGPPMSLDFARGPAGPVPQFRHPTFSNQGIASPTVPQMQPMNFRPAPNHV
GSFPPRVNSMPLQQNNPNVMLRPQNFEAPNNVFFRHGRPASGAHQIYDPFSPTSVPRHPH
PGGNPAMAEKQESDPEYEDLMASVGVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400081862
Transcript Infomation

pacid=37437675 locus=PGSC0003DMG400032140 ID=PGSC0003DMT400081862.v4.03 annot-version=v4.03
Sequence

ATGCAGATCAAAGAACATCCCGGGTACAATTTTATTGGTTTGATTTTTGGTCCTGCTCAT
AAGCAACTGGAAAAGGAAACTGGAGCTCAAGTAAAGGTTTATGGTATTAAAGCAGATACT
GAAGAGAAGGTAGAAGTTACTTCTGGTGAAAATGACTCTGGTGCTTATGAGGAAATGCAT
GTCCAAGTATCAGCGGAGACATATGAAAAGGTTGATGCTGCAGTTGCTTTAATTGAACTT
CTGGTTACCCCAGCTTCAATGACTCCTGCGGCCACAACCACAAAAGCCTCAGGTGATGGA
GAAACTATTTCCGTTGAAGCAACACCTGTCCCGACTCCTCCTCCTGTAGTAAATCAAGGG
ATAGCTCAACCAGGTTTTGGAGCACAACCTGCTCAACTTCAAAGTCATTTTCAGCCATAC
CAAGGGCAATGGTTTCCTGGACCGACATCTCAGAATCCAGTACCTCGATTTCCAGGACCC
GCTAACTCTGGGATTTCTTCAGCATCCCTGGTCAGCAACACTCACCAAGTATCACCGTCA
CCTACCAACTTGTCAAATACATCCTCACCCTTTGGTCCACCACATGGTATGCAAGATGGC
TTTGGTTCAGTTCCTCGAAACCCTTTTGTTCACTCTAGCCCACAGGCACCACTAATGCAG
CAGCAATATATGCCTTCTTCTCATTTTGGACAAATTGGTGGACTTAGACATCCTATACCA
TCTTTAGGGTCTACACCACCTCAATCCAATATGACTCTGCCTCAATTTTCTCAGGGCCAA
CCGAGTCCAACAGGGTTTCCGCAAATTGTCAGACCAGTAATGTCTTCATTACCTCAGTCT
GGCCCTCCTACAGCATATCCAGACCGACCATTGACCCCAGCTGGAAACTCCCCTGGATGG
TCACAGTTGCCATGGAACAACCAGACAGGTCAAGGTCCAAGCAACATGATTGCCATGGCT
CCCCCCACAGTTTCCCCTCAAGGAAGTCATCATCTTGCTTCACGCCCAATGGGTGTCTCT
GCAGCTCCGCATATAGATGTTTTCCAGGGCCATAATTTAGCACCCCAATCATCTGGACCA
TCTCCATCAGCACATATGCCTCCTCCATTGCGTCCATCTTCAGGATCTACCCCTGCACAT
TTCTTGAACCACTCTGTGTCTAGTGGACAACCAATCAATCCAAATCTCTCACCTAATCCA
GTTCCCGTAAGTTCTCTTAATATTAATTCTATGAGACCTACTTCCTTTGTAACTCCAAAT
CCACTGCAGCCCAATAGCGATTTTACATTCCAGCCTCACCATTCACAGAATCCAGCAGCT
TCCAGGCTAATTAGTCAATTTGGATCTCAGGAACTTTCACCTTCAAACCAAATGATGCGC
CCTCATCAACGACCAGCAATAGACAATCCAAATCTCCCACTTGTCATTCAAGGATTTCAA
AGACCCCAATTAAGCAATCAGATTAGTCAGCCAGGACCACCTATGTCACTTGACTTTGCT
CGAGGACCTGCTGGTCCTGTCCCTCAATTTAGGCATCCGACATTTTCAAATCAGGGTATA
GCTTCACCTACTGTCCCTCAAATGCAACCTATGAACTTTAGGCCAGCTCCAAATCATGTA
GGTTCCTTCCCTCCTAGAGTGAACTCCATGCCTCTTCAGCAAAATAATCCAAATGTCATG
CTTCGACCACAGAACTTTGAGGCTCCCAACAATGTCTTCTTCCGTCATGGTAGGCCTGCC
TCTGGAGCGCATCAAATATATGACCCCTTCTCGCCCACATCTGTCCCTCGACATCCTCAT
CCTGGTGGTAATCCAGCAATGGCAGAAAAACAAGAGAGTGATCCTGAATATGAAGACTTG
ATGGCCTCTGTTGGAGTTAAATGA