Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081851
CDS Infomation

pacid=37439335 polypeptide=PGSC0003DMP400055279 locus=PGSC0003DMG400032137 ID=PGSC0003DMT400081851.v4.03 annot-version=v4.03
Sequence

ATGTCAATGTCGTGGGCTGATTCTGTTTCTGCAGCCGAGAATCCGGCTGGTGCTCCGTCT
AAGTCAGCATATGTTCCACCACATCTGCGAAACAGACCTTCAACTGATCCTCCTGCACAG
GCTTCGTATGCTGGGGCTGCTGCATCATTAGGTAATGACCATAGTGGTTACGGTGTCCCA
AATGTGGTTGGGAGTCGTTGGAGTGGTCAAAGGAATGAATACCAATCTGGTTATGCTGGT
GGAGGAGGACGTGGTGGTGGTTGGAATGGCAAAAGTGGTGGTTGGGATCGTGGGAGGGAT
CGGGAAGTTAACCCCTTTACAAACGATGATAGTGAACCCGTTAGTGAACTAGAGAGTTCT
GCGATCAATTTTGATGCATATGAGGATATTCCAGTGGAAACAAGCGGGGATAATGTGCCC
CCTCCTGTGAATACTTTTGCAGATATTGATTTAGGTGAAGCTGTCAATGAAAATATAAGG
AGGTGCAAGTATGTTAGGCCAACCCCTGTGCAACGGCATGCTATACCTATTTCACTTGCG
GGGAGGGATTTGATGGCTTGTGCTCAGACTGGTTCTGGAAAAACTGCTGCTTTCTGCTTC
CCCATCATCAGTGGGATCATGAGGGGCCAATTTCCTAGACCTCCACGTCCACGCATGGCA
TTTCCTCTAGCTCTTATTCTCTCCCCAACGAGGGAGCTCTCTTGCCAAATTCATGATGAG
GCTAAAAAATTTTCATATCAAACTGGGGTCAGGGTGGTTGTTGCTTATGGTGGTGCTCCT
ATAAACCAACAGCTTCGAGAATTAGAGAGAGGTGTGCATATTCTTGTAGCAACCCCTGGA
CGGTTGGTAGATTTACTTGAGAGAGCAAGAGTCTCGTTGCAGATGATAAGGTATTTGGCT
CTAGACGAGGCTGACCGGATGCTTGACATGGGTTTTGAACCTCAAATAAGGAAAATAGTG
CAACAGATGGACATGCCTCCGCCAGGTGTGCGACAGACCATGCTTTTCAGTGCCACTTTT
CCAAAAGAGATTCAGAGACTGGCCTCAGATTTTCTATCCACTTATATCTTTTTGGCCGTC
GGAAGGGTCGGCTCTAGCACAGATTTGATTGTCCAAAGAGTTGAATATGTTCAAGAGACT
GACAAGAGAAGTCACTTGATGGATCTTCTTCATGCGCAGAAGGAAAACGGTGTTCATGGC
AAGCAATCTCTTACCCTTGTTTTCGTGGAGACGAAGAAGGGAGCTGATGCACTGGAGCAT
TGGCTTTGTATGAATGGTTTCCCTGCTACTGCTATTCATGGTGATAGAACTCAGCAGGAG
AGAGAGCATGCCCTCAGATCCTTCAAAACTGGTCACACACCAATCTTGGTTGCAACAGAT
GTGGCAGCACGTGGTCTCGATATCCCCCATGTTGCACATGTTGTTAACTTTGATCTTCCA
AATGACATTGACGACTATGTGCACCGTATTGGAAGAACTGGACGAGCAGGAAAAACAGGT
TTAGCTACTGCCTTCTTCAATGAGAACAATTCTTCACTGGCAAGATCACTATCCGACTTA
ATGCAAGAAGCAAACCAAGAAGTACCTGCTTGGCTCTCTCGCTTTGCTGCTCGATCCACT
TATGGAGGCAAGAATCGTCGTGGTGGAGCTCGTTTTGGTGCTCGTGACTTTCGAAGAGAT
TCCTCTTACAATCGAGGTGCTAGTGGTGGTGCTACAGACTATTATGGTGGTGGTGCCAAT
ATGAACAGTGGCTATCCATCTGGGGGGTATAATGCATCGTATGGAACAGCAGGCGTGACT
AGTGCATGGGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055279
PEP Infomation

pacid=37439335 transcript=PGSC0003DMT400081851 locus=PGSC0003DMG400032137 ID=PGSC0003DMT400081851.v4.03 annot-version=v4.03
Sequence

MSMSWADSVSAAENPAGAPSKSAYVPPHLRNRPSTDPPAQASYAGAAASLGNDHSGYGVP
NVVGSRWSGQRNEYQSGYAGGGGRGGGWNGKSGGWDRGRDREVNPFTNDDSEPVSELESS
AINFDAYEDIPVETSGDNVPPPVNTFADIDLGEAVNENIRRCKYVRPTPVQRHAIPISLA
GRDLMACAQTGSGKTAAFCFPIISGIMRGQFPRPPRPRMAFPLALILSPTRELSCQIHDE
AKKFSYQTGVRVVVAYGGAPINQQLRELERGVHILVATPGRLVDLLERARVSLQMIRYLA
LDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSTYIFLAV
GRVGSSTDLIVQRVEYVQETDKRSHLMDLLHAQKENGVHGKQSLTLVFVETKKGADALEH
WLCMNGFPATAIHGDRTQQEREHALRSFKTGHTPILVATDVAARGLDIPHVAHVVNFDLP
NDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARSLSDLMQEANQEVPAWLSRFAARST
YGGKNRRGGARFGARDFRRDSSYNRGASGGATDYYGGGANMNSGYPSGGYNASYGTAGVT
SAWD*

Transcript Sequence

Transcript ID

PGSC0003DMT400081851
Transcript Infomation

pacid=37439335 locus=PGSC0003DMG400032137 ID=PGSC0003DMT400081851.v4.03 annot-version=v4.03
Sequence

ATGTCAATGTCGTGGGCTGATTCTGTTTCTGCAGCCGAGAATCCGGCTGGTGCTCCGTCT
AAGTCAGCATATGTTCCACCACATCTGCGAAACAGACCTTCAACTGATCCTCCTGCACAG
GCTTCGTATGCTGGGGCTGCTGCATCATTAGGTAATGACCATAGTGGTTACGGTGTCCCA
AATGTGGTTGGGAGTCGTTGGAGTGGTCAAAGGAATGAATACCAATCTGGTTATGCTGGT
GGAGGAGGACGTGGTGGTGGTTGGAATGGCAAAAGTGGTGGTTGGGATCGTGGGAGGGAT
CGGGAAGTTAACCCCTTTACAAACGATGATAGTGAACCCGTTAGTGAACTAGAGAGTTCT
GCGATCAATTTTGATGCATATGAGGATATTCCAGTGGAAACAAGCGGGGATAATGTGCCC
CCTCCTGTGAATACTTTTGCAGATATTGATTTAGGTGAAGCTGTCAATGAAAATATAAGG
AGGTGCAAGTATGTTAGGCCAACCCCTGTGCAACGGCATGCTATACCTATTTCACTTGCG
GGGAGGGATTTGATGGCTTGTGCTCAGACTGGTTCTGGAAAAACTGCTGCTTTCTGCTTC
CCCATCATCAGTGGGATCATGAGGGGCCAATTTCCTAGACCTCCACGTCCACGCATGGCA
TTTCCTCTAGCTCTTATTCTCTCCCCAACGAGGGAGCTCTCTTGCCAAATTCATGATGAG
GCTAAAAAATTTTCATATCAAACTGGGGTCAGGGTGGTTGTTGCTTATGGTGGTGCTCCT
ATAAACCAACAGCTTCGAGAATTAGAGAGAGGTGTGCATATTCTTGTAGCAACCCCTGGA
CGGTTGGTAGATTTACTTGAGAGAGCAAGAGTCTCGTTGCAGATGATAAGGTATTTGGCT
CTAGACGAGGCTGACCGGATGCTTGACATGGGTTTTGAACCTCAAATAAGGAAAATAGTG
CAACAGATGGACATGCCTCCGCCAGGTGTGCGACAGACCATGCTTTTCAGTGCCACTTTT
CCAAAAGAGATTCAGAGACTGGCCTCAGATTTTCTATCCACTTATATCTTTTTGGCCGTC
GGAAGGGTCGGCTCTAGCACAGATTTGATTGTCCAAAGAGTTGAATATGTTCAAGAGACT
GACAAGAGAAGTCACTTGATGGATCTTCTTCATGCGCAGAAGGAAAACGGTGTTCATGGC
AAGCAATCTCTTACCCTTGTTTTCGTGGAGACGAAGAAGGGAGCTGATGCACTGGAGCAT
TGGCTTTGTATGAATGGTTTCCCTGCTACTGCTATTCATGGTGATAGAACTCAGCAGGAG
AGAGAGCATGCCCTCAGATCCTTCAAAACTGGTCACACACCAATCTTGGTTGCAACAGAT
GTGGCAGCACGTGGTCTCGATATCCCCCATGTTGCACATGTTGTTAACTTTGATCTTCCA
AATGACATTGACGACTATGTGCACCGTATTGGAAGAACTGGACGAGCAGGAAAAACAGGT
TTAGCTACTGCCTTCTTCAATGAGAACAATTCTTCACTGGCAAGATCACTATCCGACTTA
ATGCAAGAAGCAAACCAAGAAGTACCTGCTTGGCTCTCTCGCTTTGCTGCTCGATCCACT
TATGGAGGCAAGAATCGTCGTGGTGGAGCTCGTTTTGGTGCTCGTGACTTTCGAAGAGAT
TCCTCTTACAATCGAGGTGCTAGTGGTGGTGCTACAGACTATTATGGTGGTGGTGCCAAT
ATGAACAGTGGCTATCCATCTGGGGGGTATAATGCATCGTATGGAACAGCAGGCGTGACT
AGTGCATGGGACTAA