Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081827
CDS Infomation

pacid=37438426 polypeptide=PGSC0003DMP400055261 locus=PGSC0003DMG400032128 ID=PGSC0003DMT400081827.v4.03 annot-version=v4.03
Sequence

ATGCCCATATTTTCCGATATACAAGAAACAGAATTAAGTGGCACAAAAGAAGTTTTCCTG
TCTGCCATCCGCTATGCCACTTCTACCGGTGATTCATTCCCTCAATTCGAGGATGATCTA
AGAGCGTCAGCTCAAGAACAGGTTGAGTTCATGCTTGAGGACGACGAAAAGATTCCCCTG
GTCATAGCTGATGATGAAATAAAAGTGGAGACTAGAATTGTGGTGTCTAAAATCTTTTCT
TCTTTTGAAAATGAATTATTCTCGTTGATTTTGGAGCCTGACATTGCGAACAAGGATATG
GAAAAGAAAATAATGCGGAGTCTATTTGACCTCGAATGGATGCATAACACTCTTTTGAAG
ATGGATCTCATGAAGGACTTTGTCACTCACTGGTCTAATATATCGAGCAATTTACTGAAG
GTCATCGAAGATAAAAGATTTGATTCTGTCATGTGGGATTTGAAGATAAAGTTAATAGAA
GTGACATCAAAAGTATTGGAAGCAGTAGGTTACGGAACTGTAGTTCTTCCAGCAGAAAGT
CGAGTAGAATTGCTCAAGACATGGCTTCCATACATAAGAAAAATGAAGTCCCTTTCTGAT
GAAATGAGCAAAATGGACGCTGCATTACCATACAAGATGAGCGATGACCTTTGCCAATGT
GTCGAGGGAGCTATAGTTTCATTGGTTTCAGCATTACCGTCAAATGATCAAGCTGACATT
CTAGCTGATTGGATAAGTGCTGAACAGGTTAAATATCCAGACCTTAGCGAGGCTTTTGAG
ATATGGTGTTACAGAACCAAGTCTGCACAACGAAGATTAGACGAGGCTTTGACAGAGTCA
GCAATGCCAATGCCATTGCCATTGTCACCCTCTACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055261
PEP Infomation

pacid=37438426 transcript=PGSC0003DMT400081827 locus=PGSC0003DMG400032128 ID=PGSC0003DMT400081827.v4.03 annot-version=v4.03
Sequence

MPIFSDIQETELSGTKEVFLSAIRYATSTGDSFPQFEDDLRASAQEQVEFMLEDDEKIPL
VIADDEIKVETRIVVSKIFSSFENELFSLILEPDIANKDMEKKIMRSLFDLEWMHNTLLK
MDLMKDFVTHWSNISSNLLKVIEDKRFDSVMWDLKIKLIEVTSKVLEAVGYGTVVLPAES
RVELLKTWLPYIRKMKSLSDEMSKMDAALPYKMSDDLCQCVEGAIVSLVSALPSNDQADI
LADWISAEQVKYPDLSEAFEIWCYRTKSAQRRLDEALTESAMPMPLPLSPST*

Transcript Sequence

Transcript ID

PGSC0003DMT400081827
Transcript Infomation

pacid=37438426 locus=PGSC0003DMG400032128 ID=PGSC0003DMT400081827.v4.03 annot-version=v4.03
Sequence

ATGCCCATATTTTCCGATATACAAGAAACAGAATTAAGTGGCACAAAAGAAGTTTTCCTG
TCTGCCATCCGCTATGCCACTTCTACCGGTGATTCATTCCCTCAATTCGAGGATGATCTA
AGAGCGTCAGCTCAAGAACAGGTTGAGTTCATGCTTGAGGACGACGAAAAGATTCCCCTG
GTCATAGCTGATGATGAAATAAAAGTGGAGACTAGAATTGTGGTGTCTAAAATCTTTTCT
TCTTTTGAAAATGAATTATTCTCGTTGATTTTGGAGCCTGACATTGCGAACAAGGATATG
GAAAAGAAAATAATGCGGAGTCTATTTGACCTCGAATGGATGCATAACACTCTTTTGAAG
ATGGATCTCATGAAGGACTTTGTCACTCACTGGTCTAATATATCGAGCAATTTACTGAAG
GTCATCGAAGATAAAAGATTTGATTCTGTCATGTGGGATTTGAAGATAAAGTTAATAGAA
GTGACATCAAAAGTATTGGAAGCAGTAGGTTACGGAACTGTAGTTCTTCCAGCAGAAAGT
CGAGTAGAATTGCTCAAGACATGGCTTCCATACATAAGAAAAATGAAGTCCCTTTCTGAT
GAAATGAGCAAAATGGACGCTGCATTACCATACAAGATGAGCGATGACCTTTGCCAATGT
GTCGAGGGAGCTATAGTTTCATTGGTTTCAGCATTACCGTCAAATGATCAAGCTGACATT
CTAGCTGATTGGATAAGTGCTGAACAGGTTAAATATCCAGACCTTAGCGAGGCTTTTGAG
ATATGGTGTTACAGAACCAAGTCTGCACAACGAAGATTAGACGAGGCTTTGACAGAGTCA
GCAATGCCAATGCCATTGCCATTGTCACCCTCTACTTAA