Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081474
CDS Infomation

pacid=37439401 polypeptide=PGSC0003DMP400055146 locus=PGSC0003DMG400031868 ID=PGSC0003DMT400081474.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGCAATCACAAATTTTGAAGAAAATGATGATGAATATAATGGAGTAATTAGT
AGACAAGAAGTTCAAGCTGCCATTGCTAAAGCTGTAGAGCTTAGAGCTATTCATGCTTCT
TTATTACAGGGTATTAATAATAATAGTAATATTAATAATAGCCCTGCTAATTTCATCAAG
TTTCCTCCTCATTCTTCTTCTTCTTCTTCCCCTGCTGCTAATCTCTTCTCTGCTCAAGAA
TATCCTATTTTTACACCAAGTTATGAAGATGCTCCATTACCTGGATCCAAACAACTACAC
CTCGACGATCGAGACTACACTGACCTTTGGGATGATTATGGCCTTGGTGGAGTAGCAAAT
TGTGATGAAGTCAGTCTATCGAATTACAGAAAGGCGAATTCCTCCTTAAGGAAAGGAGTT
TCATCCAATTTGATCAATTCTGATTCTCATAACTGTCCAACTGATGATCAGAGATCGGTC
ACCGGCTCTTATACTGGTCATATCACTCTGCTTAGAAACTCTCCTGGTGGTGATTACTCT
AACTCTAGAAGAAGCTCTTTGGGTGACTTGAGATCGCTTTCGTCTTACAATAGATCATGT
AAACCTGCTATGGTAAATACTGAGACAGATGGTGCTAGCAAAAGTGGGAAAAGCTCTAAT
GTAATCGTGCCATTGACAAATTCGCACTCTTTAAATCAATTGCAGCCAAAGAGTAAAGGA
ATGAACTTGTCGTGGTTGTTCCCTAAGCTAAAGAAGAAAAACAAGAATGAAAATTCACCA
TATCGGAGAGAGGCCGAGGAAGTTTCTCAGATTTGTAAGGATCACATCGGGGTGGTTTCT
GTTGAAACGTTGAGGAAAGAACTCGTGGAAGCAAATGAGAGCAGAGAGGCAGCCTTGATG
GAAGTCGCGGAAATGAAGTCTTCTTTAGGAGGGCTAAAGCAAAAAATGGAGTACTTAGAA
ACTTATTGTGAGGAGCTCAAGAAAGCCTTGAGACAAGCAATTCAAACAAAAGAATCCCAA
CTATCCAACATGCTTATAGATCTTCCGAGAAGGGGGAAATCAACGGATGGGGATGGAGAA
AACACGATTCCTGTTAGTGAAGAGGTAATGGTTGAAGGATTCTTGCAGATAGTATCGGAA
TCAAGACTATCCGTTAAGCAATTCTGCAAGACTCTTATTGCACAAGTTGAAGAGACAGAT
AATTCCTTAACCGATAGCTTAAACCTTCTACTTCAACCTTACAAGCTTTCCCTTAACTCG
AAGCACTCAAAGGCGATCCTATACCATATTGAAGCCATCATAAACCAGTCACTCTTCCAA
GATTTCGAGAATGTTGTGTTCCAAAAGAACGGTGCTCCAAAACAATTAGACTCTCAACAA
GATTGCCATGATCAATTCTCATCGTTTGTCTCGTTGAGGAACCTAAGCTGGAATGAAGTG
TTACGAAAGGGGACTAAGTACTATAGTGAAGATTTCAGTAAATTTTGTGATCAGAAAATG
TGTTGCATCATCACATCACTTAATTGGAGAAGGCCATGGCCAGAACAACTCCTACAAGCA
TTCTTTGTGGCTTCTAAGTGCATTTGGTTGTTGCATTTACTCGCGTTTTCGTTCGATCCT
CCACTTGGGATTCTGAGAGTTGAAGAGAATACAACATTTGATAAGAATTACATGGAGGAC
ATATTTGGAGATAGGCAAAAATCACAAGGTACAAGTAAGGTTAAGATTATGGTAGTGCCT
GGTTTCTATGTACGTGATAGAGTACATAGGTGTAAGGTAATTTGCAGGTACAAATCTGCA
GCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055146
PEP Infomation

pacid=37439401 transcript=PGSC0003DMT400081474 locus=PGSC0003DMG400031868 ID=PGSC0003DMT400081474.v4.03 annot-version=v4.03
Sequence

MAGAITNFEENDDEYNGVISRQEVQAAIAKAVELRAIHASLLQGINNNSNINNSPANFIK
FPPHSSSSSSPAANLFSAQEYPIFTPSYEDAPLPGSKQLHLDDRDYTDLWDDYGLGGVAN
CDEVSLSNYRKANSSLRKGVSSNLINSDSHNCPTDDQRSVTGSYTGHITLLRNSPGGDYS
NSRRSSLGDLRSLSSYNRSCKPAMVNTETDGASKSGKSSNVIVPLTNSHSLNQLQPKSKG
MNLSWLFPKLKKKNKNENSPYRREAEEVSQICKDHIGVVSVETLRKELVEANESREAALM
EVAEMKSSLGGLKQKMEYLETYCEELKKALRQAIQTKESQLSNMLIDLPRRGKSTDGDGE
NTIPVSEEVMVEGFLQIVSESRLSVKQFCKTLIAQVEETDNSLTDSLNLLLQPYKLSLNS
KHSKAILYHIEAIINQSLFQDFENVVFQKNGAPKQLDSQQDCHDQFSSFVSLRNLSWNEV
LRKGTKYYSEDFSKFCDQKMCCIITSLNWRRPWPEQLLQAFFVASKCIWLLHLLAFSFDP
PLGILRVEENTTFDKNYMEDIFGDRQKSQGTSKVKIMVVPGFYVRDRVHRCKVICRYKSA
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400081474
Transcript Infomation

pacid=37439401 locus=PGSC0003DMG400031868 ID=PGSC0003DMT400081474.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGCAATCACAAATTTTGAAGAAAATGATGATGAATATAATGGAGTAATTAGT
AGACAAGAAGTTCAAGCTGCCATTGCTAAAGCTGTAGAGCTTAGAGCTATTCATGCTTCT
TTATTACAGGGTATTAATAATAATAGTAATATTAATAATAGCCCTGCTAATTTCATCAAG
TTTCCTCCTCATTCTTCTTCTTCTTCTTCCCCTGCTGCTAATCTCTTCTCTGCTCAAGAA
TATCCTATTTTTACACCAAGTTATGAAGATGCTCCATTACCTGGATCCAAACAACTACAC
CTCGACGATCGAGACTACACTGACCTTTGGGATGATTATGGCCTTGGTGGAGTAGCAAAT
TGTGATGAAGTCAGTCTATCGAATTACAGAAAGGCGAATTCCTCCTTAAGGAAAGGAGTT
TCATCCAATTTGATCAATTCTGATTCTCATAACTGTCCAACTGATGATCAGAGATCGGTC
ACCGGCTCTTATACTGGTCATATCACTCTGCTTAGAAACTCTCCTGGTGGTGATTACTCT
AACTCTAGAAGAAGCTCTTTGGGTGACTTGAGATCGCTTTCGTCTTACAATAGATCATGT
AAACCTGCTATGGTAAATACTGAGACAGATGGTGCTAGCAAAAGTGGGAAAAGCTCTAAT
GTAATCGTGCCATTGACAAATTCGCACTCTTTAAATCAATTGCAGCCAAAGAGTAAAGGA
ATGAACTTGTCGTGGTTGTTCCCTAAGCTAAAGAAGAAAAACAAGAATGAAAATTCACCA
TATCGGAGAGAGGCCGAGGAAGTTTCTCAGATTTGTAAGGATCACATCGGGGTGGTTTCT
GTTGAAACGTTGAGGAAAGAACTCGTGGAAGCAAATGAGAGCAGAGAGGCAGCCTTGATG
GAAGTCGCGGAAATGAAGTCTTCTTTAGGAGGGCTAAAGCAAAAAATGGAGTACTTAGAA
ACTTATTGTGAGGAGCTCAAGAAAGCCTTGAGACAAGCAATTCAAACAAAAGAATCCCAA
CTATCCAACATGCTTATAGATCTTCCGAGAAGGGGGAAATCAACGGATGGGGATGGAGAA
AACACGATTCCTGTTAGTGAAGAGGTAATGGTTGAAGGATTCTTGCAGATAGTATCGGAA
TCAAGACTATCCGTTAAGCAATTCTGCAAGACTCTTATTGCACAAGTTGAAGAGACAGAT
AATTCCTTAACCGATAGCTTAAACCTTCTACTTCAACCTTACAAGCTTTCCCTTAACTCG
AAGCACTCAAAGGCGATCCTATACCATATTGAAGCCATCATAAACCAGTCACTCTTCCAA
GATTTCGAGAATGTTGTGTTCCAAAAGAACGGTGCTCCAAAACAATTAGACTCTCAACAA
GATTGCCATGATCAATTCTCATCGTTTGTCTCGTTGAGGAACCTAAGCTGGAATGAAGTG
TTACGAAAGGGGACTAAGTACTATAGTGAAGATTTCAGTAAATTTTGTGATCAGAAAATG
TGTTGCATCATCACATCACTTAATTGGAGAAGGCCATGGCCAGAACAACTCCTACAAGCA
TTCTTTGTGGCTTCTAAGTGCATTTGGTTGTTGCATTTACTCGCGTTTTCGTTCGATCCT
CCACTTGGGATTCTGAGAGTTGAAGAGAATACAACATTTGATAAGAATTACATGGAGGAC
ATATTTGGAGATAGGCAAAAATCACAAGGTACAAGTAAGGTTAAGATTATGGTAGTGCCT
GGTTTCTATGTACGTGATAGAGTACATAGGTGTAAGGTAATTTGCAGGTACAAATCTGCA
GCTTAA