Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081445
CDS Infomation

pacid=37455331 polypeptide=PGSC0003DMP400055122 locus=PGSC0003DMG400031844 ID=PGSC0003DMT400081445.v4.03 annot-version=v4.03
Sequence

ATGGATTCCGGCGATAACGAGGTGGTAGTCGATTTTCCTCATTTCATCCGTGTCTACAAA
AACGGCCGTGTTGAGCGGTTGTTCGGTTCACCGATCGTTCCGCCGTCGCCGGAAGATCCT
GCTACCGGCGTCTCCTCAAAAGACATAGACATTTCGCCGGAATTCAAAGCTAGAATTTAC
CTCCCAAAACTCACAAACAGTATTACCGACCAAAAACTCCCAATCTTAGTCTACTATCAC
GGCGGCGCATTCTGTCTCGAATCCGCCTTCTCTGTCCTCGACCACCGTTACCTTAACCGC
ATAGTCGCCGAATCCAATGTCATCGCCGTTTCAGTTGAATACCGTCTTGTCCCGGAAAAC
CCATTTCCGGTAGCGTATGAAGACTCTTGGGCCGCTCTTCAATGGGTCGGATCCCATGTT
GAAGCAAAACCCGGGTTCGAAAAGGAACCTTGGTTAGTTAACCATGGAGATTTCGAGAAG
GTACTAATCGGAGGCGATAGTGCCGGAGGTAACATAGTTCATAATCTATCTCTCAGATCT
GGATCTGAAAGCTTAAATGGTGGAATCAAAATCCTGGGTTCATTACTCTGTTTTCCATAC
TTTTTAACATCAATTGATTTTAAAGAAGACAGTTTACCCAGTAAGCTTTGGAGGTTTGTA
AACCCATCAACTAAAGACGGAGTTGATGATCCAAACATTAATCCGTTTGTTGAAAAAGCT
CAAAGTTTATCAACATTGGGTTGTTCAAAGATTTTAGTTTGTGTTGCAGAGAAAGATGAG
CTGAGAAATATTGGGATTAAGTATGCTGAAGCAGTGAAGAACAGTGAATGGAAAGGGGAA
ATTGAATTGATTGATGTTGAAGGTGAAGATCATTGCTTTCAGATTTTTGATACTGAAACT
GAAAAAGCCAAAAATCTGATTAAGGAAATAGCTAGTTTTATCAAAAAGAGCTGTGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400055122
PEP Infomation

pacid=37455331 transcript=PGSC0003DMT400081445 locus=PGSC0003DMG400031844 ID=PGSC0003DMT400081445.v4.03 annot-version=v4.03
Sequence

MDSGDNEVVVDFPHFIRVYKNGRVERLFGSPIVPPSPEDPATGVSSKDIDISPEFKARIY
LPKLTNSITDQKLPILVYYHGGAFCLESAFSVLDHRYLNRIVAESNVIAVSVEYRLVPEN
PFPVAYEDSWAALQWVGSHVEAKPGFEKEPWLVNHGDFEKVLIGGDSAGGNIVHNLSLRS
GSESLNGGIKILGSLLCFPYFLTSIDFKEDSLPSKLWRFVNPSTKDGVDDPNINPFVEKA
QSLSTLGCSKILVCVAEKDELRNIGIKYAEAVKNSEWKGEIELIDVEGEDHCFQIFDTET
EKAKNLIKEIASFIKKSCV*

Transcript Sequence

Transcript ID

PGSC0003DMT400081445
Transcript Infomation

pacid=37455331 locus=PGSC0003DMG400031844 ID=PGSC0003DMT400081445.v4.03 annot-version=v4.03
Sequence

ATGGATTCCGGCGATAACGAGGTGGTAGTCGATTTTCCTCATTTCATCCGTGTCTACAAA
AACGGCCGTGTTGAGCGGTTGTTCGGTTCACCGATCGTTCCGCCGTCGCCGGAAGATCCT
GCTACCGGCGTCTCCTCAAAAGACATAGACATTTCGCCGGAATTCAAAGCTAGAATTTAC
CTCCCAAAACTCACAAACAGTATTACCGACCAAAAACTCCCAATCTTAGTCTACTATCAC
GGCGGCGCATTCTGTCTCGAATCCGCCTTCTCTGTCCTCGACCACCGTTACCTTAACCGC
ATAGTCGCCGAATCCAATGTCATCGCCGTTTCAGTTGAATACCGTCTTGTCCCGGAAAAC
CCATTTCCGGTAGCGTATGAAGACTCTTGGGCCGCTCTTCAATGGGTCGGATCCCATGTT
GAAGCAAAACCCGGGTTCGAAAAGGAACCTTGGTTAGTTAACCATGGAGATTTCGAGAAG
GTACTAATCGGAGGCGATAGTGCCGGAGGTAACATAGTTCATAATCTATCTCTCAGATCT
GGATCTGAAAGCTTAAATGGTGGAATCAAAATCCTGGGTTCATTACTCTGTTTTCCATAC
TTTTTAACATCAATTGATTTTAAAGAAGACAGTTTACCCAGTAAGCTTTGGAGGTTTGTA
AACCCATCAACTAAAGACGGAGTTGATGATCCAAACATTAATCCGTTTGTTGAAAAAGCT
CAAAGTTTATCAACATTGGGTTGTTCAAAGATTTTAGTTTGTGTTGCAGAGAAAGATGAG
CTGAGAAATATTGGGATTAAGTATGCTGAAGCAGTGAAGAACAGTGAATGGAAAGGGGAA
ATTGAATTGATTGATGTTGAAGGTGAAGATCATTGCTTTCAGATTTTTGATACTGAAACT
GAAAAAGCCAAAAATCTGATTAAGGAAATAGCTAGTTTTATCAAAAAGAGCTGTGTGTGA