Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081437
CDS Infomation

pacid=37455097 polypeptide=PGSC0003DMP400055114 locus=PGSC0003DMG400031836 ID=PGSC0003DMT400081437.v4.03 annot-version=v4.03
Sequence

ATGGAACTGATAAAAGTATTACACATTTCTGTTGCATTTTTCTTCTTGTTCTTTTCTATT
TACTGTCAATGTCATCCTTTAGACCCTCTTAATCCTGATGAAATCAACAAAATTAGAGTC
ATTATCCAAAAATCCCACCTTTCAAATGTAACATTTCATTATGTAGATCTTGATGAACCA
GAAAAGAATGATGTCCTGCATTGGCTTTCCTCTCATAAATTACAAAATGCCTCTTTTCCT
TATCGTCGAGCCAGGGTAGTAGTTCGCGCTAATGGTGAGTCACATGAACTCACACTAGAC
TTGGTTACTAGCTCTATCATATCACAAAAGTTGTACTTAGGTCATGGCTTTCCTCCTTTT
ACTCTCAATGAACTTATACAGTCTAGCATCCTGCCATTGAGTAATCCTAAATTTCAAGAA
TCGATTTCGCGGAGGGGATTGAATATATCTGAAGTCAGCTGCATACCACTATCAGTTGGA
TGGTTTGGTCAGGTAAAGACCATTAGAGTTCTTAGTGTTCCATGTTTTTATCTTGGAGGA
ACTACTAACTTTTGGGCAAGGCCTATTGAAGGAATAACTATACTAGTAGATGTTGAATCA
ATGAAGATTATTAAGTATTTGGATAGATTCAGATCCCCATTGCCTGAAGCAAAAGATGCT
GATTTCAATTCGTCGAGCCAGGGATCAGTTACTTGCAATGAAACAGGATCCTTCAGGATA
AACATCCAAGGTCATGAAGTTAGTTGGGCTAATTGGAAACTTCATGTTGGATTCAATACT
AGAGCAGGGATGATCATATCTACAGCTTCTATATTCGATGCTGTGAGAAATGAATATCGA
CGTGTACTCTATAAAGGTCATGTCTCTGAGATATTCGTGCCTTACATGGATCCTACGTTT
GAATGGTACTACAGGACATTTATGGATGTTGGTGAATTTGGTTTTGGGAGATCGGCTAGC
ACCCTTGTCCAGTCGTTGGACTGTCCAAACAATGCGGTGTATATGGATGGTTACATGGCT
GATTCAGTAGGTCAAGTAGTACAAGTCCCTCGAGCTATTTGCATTTTTGAACGATATGCT
GGTGATGCTGCATGGAGGCATACAGAAATTGGAGTACCTGGAACATTAAACACCAAGGGA
CAGAAAGAAGTTAATTTGGTGATCAGAATGGTAACAACAGTTGGAAATTATGACTATATA
CTTGATTGGGAGTTCAAACAAAGTGGATCCATTAAAGTTGGAGCAAGTCTAACAGGGATT
ATGGAGATGAAGGCTGTGAAATACACGAACCACGATCAAATAAATCAGGATGTTTACGGT
ACTCTTGTGGCAGAAAACACAATTGCAGTGAACCATGATCATTTCCTTACGTATCGCATT
GATCTTGATGTGGATGGTAGTAAAAATTCATTCTTGAAAGCCAAACTGAAAACTACAAGA
GTGAAAGATCAGAAAATGTCACCAAGGAAGAGTTATTGGAGTGTTGTTAAAGAAACTATG
AAAACAGAATCTGAAGGCAGGACACAACTTGGGATAGAAGCAGCTGAATTGTTGTTTGTT
AACACTGAAAAAAAGAGTAAAGTTGGTAATGATGTAGGTTATAAGCTAATTCCTAGTAGA
CCATCTATGTCTTTGTTAACAGATGATGATTACCCTCAAATTAGAGCAGCTTATACTAAG
TATCAATTGTGGGTGACTCCTTACAACAAGTCAGAAAGATGGGCTGCTGGGTTTTATGCT
GATAGAAGTCATGGTGATGATGGACTCACAGTCTGGAGTGGAAGGAATAGATCAATTGAA
AAGAAGGATATTGTGCTTTGGTACACACTTGGATTTCATCATGTACCTTGCCAAGAAGAT
TATCCTATAATGCCAACAATCTATGATGCTTTTGAGCTCCGGCCAACAAATTTCTTTGAA
AGAAACCCATTGTTGGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055114
PEP Infomation

pacid=37455097 transcript=PGSC0003DMT400081437 locus=PGSC0003DMG400031836 ID=PGSC0003DMT400081437.v4.03 annot-version=v4.03
Sequence

MELIKVLHISVAFFFLFFSIYCQCHPLDPLNPDEINKIRVIIQKSHLSNVTFHYVDLDEP
EKNDVLHWLSSHKLQNASFPYRRARVVVRANGESHELTLDLVTSSIISQKLYLGHGFPPF
TLNELIQSSILPLSNPKFQESISRRGLNISEVSCIPLSVGWFGQVKTIRVLSVPCFYLGG
TTNFWARPIEGITILVDVESMKIIKYLDRFRSPLPEAKDADFNSSSQGSVTCNETGSFRI
NIQGHEVSWANWKLHVGFNTRAGMIISTASIFDAVRNEYRRVLYKGHVSEIFVPYMDPTF
EWYYRTFMDVGEFGFGRSASTLVQSLDCPNNAVYMDGYMADSVGQVVQVPRAICIFERYA
GDAAWRHTEIGVPGTLNTKGQKEVNLVIRMVTTVGNYDYILDWEFKQSGSIKVGASLTGI
MEMKAVKYTNHDQINQDVYGTLVAENTIAVNHDHFLTYRIDLDVDGSKNSFLKAKLKTTR
VKDQKMSPRKSYWSVVKETMKTESEGRTQLGIEAAELLFVNTEKKSKVGNDVGYKLIPSR
PSMSLLTDDDYPQIRAAYTKYQLWVTPYNKSERWAAGFYADRSHGDDGLTVWSGRNRSIE
KKDIVLWYTLGFHHVPCQEDYPIMPTIYDAFELRPTNFFERNPLLD*

Transcript Sequence

Transcript ID

PGSC0003DMT400081437
Transcript Infomation

pacid=37455097 locus=PGSC0003DMG400031836 ID=PGSC0003DMT400081437.v4.03 annot-version=v4.03
Sequence

ATGGAACTGATAAAAGTATTACACATTTCTGTTGCATTTTTCTTCTTGTTCTTTTCTATT
TACTGTCAATGTCATCCTTTAGACCCTCTTAATCCTGATGAAATCAACAAAATTAGAGTC
ATTATCCAAAAATCCCACCTTTCAAATGTAACATTTCATTATGTAGATCTTGATGAACCA
GAAAAGAATGATGTCCTGCATTGGCTTTCCTCTCATAAATTACAAAATGCCTCTTTTCCT
TATCGTCGAGCCAGGGTAGTAGTTCGCGCTAATGGTGAGTCACATGAACTCACACTAGAC
TTGGTTACTAGCTCTATCATATCACAAAAGTTGTACTTAGGTCATGGCTTTCCTCCTTTT
ACTCTCAATGAACTTATACAGTCTAGCATCCTGCCATTGAGTAATCCTAAATTTCAAGAA
TCGATTTCGCGGAGGGGATTGAATATATCTGAAGTCAGCTGCATACCACTATCAGTTGGA
TGGTTTGGTCAGGTAAAGACCATTAGAGTTCTTAGTGTTCCATGTTTTTATCTTGGAGGA
ACTACTAACTTTTGGGCAAGGCCTATTGAAGGAATAACTATACTAGTAGATGTTGAATCA
ATGAAGATTATTAAGTATTTGGATAGATTCAGATCCCCATTGCCTGAAGCAAAAGATGCT
GATTTCAATTCGTCGAGCCAGGGATCAGTTACTTGCAATGAAACAGGATCCTTCAGGATA
AACATCCAAGGTCATGAAGTTAGTTGGGCTAATTGGAAACTTCATGTTGGATTCAATACT
AGAGCAGGGATGATCATATCTACAGCTTCTATATTCGATGCTGTGAGAAATGAATATCGA
CGTGTACTCTATAAAGGTCATGTCTCTGAGATATTCGTGCCTTACATGGATCCTACGTTT
GAATGGTACTACAGGACATTTATGGATGTTGGTGAATTTGGTTTTGGGAGATCGGCTAGC
ACCCTTGTCCAGTCGTTGGACTGTCCAAACAATGCGGTGTATATGGATGGTTACATGGCT
GATTCAGTAGGTCAAGTAGTACAAGTCCCTCGAGCTATTTGCATTTTTGAACGATATGCT
GGTGATGCTGCATGGAGGCATACAGAAATTGGAGTACCTGGAACATTAAACACCAAGGGA
CAGAAAGAAGTTAATTTGGTGATCAGAATGGTAACAACAGTTGGAAATTATGACTATATA
CTTGATTGGGAGTTCAAACAAAGTGGATCCATTAAAGTTGGAGCAAGTCTAACAGGGATT
ATGGAGATGAAGGCTGTGAAATACACGAACCACGATCAAATAAATCAGGATGTTTACGGT
ACTCTTGTGGCAGAAAACACAATTGCAGTGAACCATGATCATTTCCTTACGTATCGCATT
GATCTTGATGTGGATGGTAGTAAAAATTCATTCTTGAAAGCCAAACTGAAAACTACAAGA
GTGAAAGATCAGAAAATGTCACCAAGGAAGAGTTATTGGAGTGTTGTTAAAGAAACTATG
AAAACAGAATCTGAAGGCAGGACACAACTTGGGATAGAAGCAGCTGAATTGTTGTTTGTT
AACACTGAAAAAAAGAGTAAAGTTGGTAATGATGTAGGTTATAAGCTAATTCCTAGTAGA
CCATCTATGTCTTTGTTAACAGATGATGATTACCCTCAAATTAGAGCAGCTTATACTAAG
TATCAATTGTGGGTGACTCCTTACAACAAGTCAGAAAGATGGGCTGCTGGGTTTTATGCT
GATAGAAGTCATGGTGATGATGGACTCACAGTCTGGAGTGGAAGGAATAGATCAATTGAA
AAGAAGGATATTGTGCTTTGGTACACACTTGGATTTCATCATGTACCTTGCCAAGAAGAT
TATCCTATAATGCCAACAATCTATGATGCTTTTGAGCTCCGGCCAACAAATTTCTTTGAA
AGAAACCCATTGTTGGACTAG