Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081398
CDS Infomation

pacid=37456042 polypeptide=PGSC0003DMP400055079 locus=PGSC0003DMG400031819 ID=PGSC0003DMT400081398.v4.03 annot-version=v4.03
Sequence

ATGGAATCCTGTGATTGCATTGAGGCTTTACTGCCAACTGGTGACCTGCTGGTTAAATAC
CAATACCTCTCAGATTTCTTCATTGCTGTAGCCTACTTTTCCATTCCATTGGAGCTTATT
TATTTTGTCCACAAATCTGCATGCTTCCCATACAGATGGGTTCTCATGCAATTTGGCGCT
TTTATTGTTCTCTGTGGAGCAACACACTTTATTAGCTTGTGGACATTCTTTATGCACTCT
AAGACGGTTGCTGTGGTTATGACCATATCAAAAATGTTAACAGCTGCTGTGTCCTGTATC
ACAGCTTTGATGCTTGTTCACATTATTCCTGATTTGCTAAGTGTTAAAACACGAGAGTTG
TTCTTGAAAACTCGAGCTGAAGAGCTTGACAAGGAAATGGGCCTAATAATAAGACAAGAA
GAAACTGGCAGACATGTCAGGATGCTGACTCATGAGATAAGAAGCACACTCGACAGACAC
ACAATCTTGAAGACTACTCTTGTGGAGCTAGGTAGGACCTTAGACCTGGCAGAATGTGCT
TTGTGGATGCCATGCCAAGGAGGCCTGACTTTGCAACTTTCCCATAATTTGAACAATCTA
ATACCTCTGGGATCTACTGTACCAATTAATCTTCCTATTATCAATGAGATTTTTAGTAGC
CCTGAAGCAATACAGATTCCACATACGAATCCTTTGGCAAGGATGAGGAATACAGTTGGT
AGATATATTCCACCAGAAGTAGTTGCTGTTCGTGTACCTCTTTTACACCTCTCAAGTTTT
ACTAATGACTGGGCTGAATTGTCTACTAGAAGTTATGCGGTGATGGTTCTGGTTCTCCCA
ATGAATGGCTTAAGAAAGTGGCGTGAACATGAGTTAGAACTTGTGCAAGTTGTCGCAGAT
CAGGTTGCTGTCGCTCTTTCACATGCTGCAATTTTAGAAGATTCCATGCGAGCCCATGAT
CAGCTCATGGAACAGAATATTGCTTTGGATGTAGCTCGACAAGAAGCAGAGATGGCCATC
CGTGCACGTAACGACTTCCTTGCTGTAATGAACCATGAAATGAGAACGCCTATGCATGCA
GTTATTGCTCTGTGCTCTCTGCTTTTAGAAACAGACTTAACTCCAGAGCAGAGGGTTATG
ATCGAGACCATATTGAAGAGTAGCAATCTTCTTGCAACACTGATTAATGATGTTCTAGAT
CTTTCTAGACTTGAAGATGGTATTCTTGAACTCGAAAATGGAACATTCAATCTTCATGGA
ATCTTAAGAGAGGCCGTTAATTTGATAAAGCCAATTGCATCTTTGAAGAAATTATCTATA
ACTCTTGCTTTGGCTCTGGATTTACCTATTCTTGCTGTGGGTGATGCAAAACGTCTTATC
CAAATTCTCTTAAATGTGGCGGGAAATGCTGTGAAGTTCACTAAAGAAGGTCATATCTCA
ATTGAGGCTTCAGTTGCCAAACCAGAGTATGTGAGAGATTGTCATCCTCCTGAAATGTTC
CCTATGCCAAGTGATGGCCAGTTTTATTTGCGCGTCCAGGTTGAGCATTTCTATCCTCTT
ATCATGGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055079
PEP Infomation

pacid=37456042 transcript=PGSC0003DMT400081398 locus=PGSC0003DMG400031819 ID=PGSC0003DMT400081398.v4.03 annot-version=v4.03
Sequence

MESCDCIEALLPTGDLLVKYQYLSDFFIAVAYFSIPLELIYFVHKSACFPYRWVLMQFGA
FIVLCGATHFISLWTFFMHSKTVAVVMTISKMLTAAVSCITALMLVHIIPDLLSVKTREL
FLKTRAEELDKEMGLIIRQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLAECA
LWMPCQGGLTLQLSHNLNNLIPLGSTVPINLPIINEIFSSPEAIQIPHTNPLARMRNTVG
RYIPPEVVAVRVPLLHLSSFTNDWAELSTRSYAVMVLVLPMNGLRKWREHELELVQVVAD
QVAVALSHAAILEDSMRAHDQLMEQNIALDVARQEAEMAIRARNDFLAVMNHEMRTPMHA
VIALCSLLLETDLTPEQRVMIETILKSSNLLATLINDVLDLSRLEDGILELENGTFNLHG
ILREAVNLIKPIASLKKLSITLALALDLPILAVGDAKRLIQILLNVAGNAVKFTKEGHIS
IEASVAKPEYVRDCHPPEMFPMPSDGQFYLRVQVEHFYPLIMA*

Transcript Sequence

Transcript ID

PGSC0003DMT400081398
Transcript Infomation

pacid=37456042 locus=PGSC0003DMG400031819 ID=PGSC0003DMT400081398.v4.03 annot-version=v4.03
Sequence

ATGGAATCCTGTGATTGCATTGAGGCTTTACTGCCAACTGGTGACCTGCTGGTTAAATAC
CAATACCTCTCAGATTTCTTCATTGCTGTAGCCTACTTTTCCATTCCATTGGAGCTTATT
TATTTTGTCCACAAATCTGCATGCTTCCCATACAGATGGGTTCTCATGCAATTTGGCGCT
TTTATTGTTCTCTGTGGAGCAACACACTTTATTAGCTTGTGGACATTCTTTATGCACTCT
AAGACGGTTGCTGTGGTTATGACCATATCAAAAATGTTAACAGCTGCTGTGTCCTGTATC
ACAGCTTTGATGCTTGTTCACATTATTCCTGATTTGCTAAGTGTTAAAACACGAGAGTTG
TTCTTGAAAACTCGAGCTGAAGAGCTTGACAAGGAAATGGGCCTAATAATAAGACAAGAA
GAAACTGGCAGACATGTCAGGATGCTGACTCATGAGATAAGAAGCACACTCGACAGACAC
ACAATCTTGAAGACTACTCTTGTGGAGCTAGGTAGGACCTTAGACCTGGCAGAATGTGCT
TTGTGGATGCCATGCCAAGGAGGCCTGACTTTGCAACTTTCCCATAATTTGAACAATCTA
ATACCTCTGGGATCTACTGTACCAATTAATCTTCCTATTATCAATGAGATTTTTAGTAGC
CCTGAAGCAATACAGATTCCACATACGAATCCTTTGGCAAGGATGAGGAATACAGTTGGT
AGATATATTCCACCAGAAGTAGTTGCTGTTCGTGTACCTCTTTTACACCTCTCAAGTTTT
ACTAATGACTGGGCTGAATTGTCTACTAGAAGTTATGCGGTGATGGTTCTGGTTCTCCCA
ATGAATGGCTTAAGAAAGTGGCGTGAACATGAGTTAGAACTTGTGCAAGTTGTCGCAGAT
CAGGTTGCTGTCGCTCTTTCACATGCTGCAATTTTAGAAGATTCCATGCGAGCCCATGAT
CAGCTCATGGAACAGAATATTGCTTTGGATGTAGCTCGACAAGAAGCAGAGATGGCCATC
CGTGCACGTAACGACTTCCTTGCTGTAATGAACCATGAAATGAGAACGCCTATGCATGCA
GTTATTGCTCTGTGCTCTCTGCTTTTAGAAACAGACTTAACTCCAGAGCAGAGGGTTATG
ATCGAGACCATATTGAAGAGTAGCAATCTTCTTGCAACACTGATTAATGATGTTCTAGAT
CTTTCTAGACTTGAAGATGGTATTCTTGAACTCGAAAATGGAACATTCAATCTTCATGGA
ATCTTAAGAGAGGCCGTTAATTTGATAAAGCCAATTGCATCTTTGAAGAAATTATCTATA
ACTCTTGCTTTGGCTCTGGATTTACCTATTCTTGCTGTGGGTGATGCAAAACGTCTTATC
CAAATTCTCTTAAATGTGGCGGGAAATGCTGTGAAGTTCACTAAAGAAGGTCATATCTCA
ATTGAGGCTTCAGTTGCCAAACCAGAGTATGTGAGAGATTGTCATCCTCCTGAAATGTTC
CCTATGCCAAGTGATGGCCAGTTTTATTTGCGCGTCCAGGTTGAGCATTTCTATCCTCTT
ATCATGGCTTAA