Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081393
CDS Infomation

pacid=37454888 polypeptide=PGSC0003DMP400055074 locus=PGSC0003DMG400031817 ID=PGSC0003DMT400081393.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGCTACTTCAATGTCAGTTTCTATCGAATGTGTGAATATATGTAAGTCTTGG
AAAGGAGATGTGAGTGGAAGACTCGACTGTAGTGCGTTATCTTGTGCCTGGAAGGCACCA
AGGGCCTTGACTGGATTCCTTGCAAGCACAACTCATCCTACTCAGTGTTCCTCTACTCGT
TTTGGGAGATATGGAAGAAGAGATCGTCTCCGCCGATGTAGATGTTATACTTCTGATATG
GATGAACGCTACCCTGTTGAAGTTCTGCGAGGAGTCCCTGGCTCAATGCTTCTACTATCT
GCTTCTAGCAAATGGAAATTGTGTTGCTCTTCATCATTTTCTTCAGAGTCGTATGTAGCG
ATATCTCCTGAAAGTTTGTGGGAGGATCTTAAACCTACTATTTCATATCTTTCTTGCAAG
GAATTGGAATTGGTTCGTAAGGCTTTGAATCTTGCTTTTGAGGCACATGATGGTCAAAAG
CGTCGTAGTGGAGAGCCCTTTATTATTCACCCAGTTGCAGTTGCACAGATCCTTGGACAG
CTTGAATTGGATTGGGAGTCGGTTGCTGCTGGGTTATTACATGATACTGTAGAGGACACA
GATGTAGTTACTTTTGAAAGAATAGAGAAGGAATTTGGTGCAACAGTTCGCCGTATTGTT
GAAGGGGAGACTAAGGTATCCAAGCTGGGAAAGATCAAGTGCAAGGATGAAAGCCATGTA
CAGGATGTCAAAGCTGATGACCTTAGGCAGATGTTTCTTTCCATGACAGAGGAGGTCCGT
GTTATAATTGTCAAATTAGCTGATAGATTACATAACATGCGCACTCTTTCACACATGCCT
CCACACAAGCAGTCTGGAATCGCAACAGAGACGCTGCAGGTTTTTGCTCCTTTGGCAAAA
CTTCTCGGAATATACCAAATCAAGTCAGAGCTTGAAAACTTAGCATTTATGTATACAAAT
GCTCAAGATTATGCCAGGGTGCAGCGTAGGATTGCAGAACTTTATAAAGAACATGAAAAG
GAAATTGAAGAGGCAAAAAGAATATTGATGAAGAAAATAGAGGAAGACCAATTCCTAGAA
CTTGTGACTGTGAAGACGGAAATTCAATCAATATGCAAGGAACCTTACAGCATCTACAAA
GCAGTACTCAAGTCTAAGAGTTCAATAAACGAAGTAAACCAAATTGCACAGCTTCGAATT
ATTATAAAACCAAAGCCTTGTGTCGGAGTTAGGCCCCTTTGCAATGCACAGCAGATATGC
TATCATCTGCTTGGACTAGTACATGGAATCTGGACACCTATCCCTCGTGCTATGAAAGAC
TACATTGCCACCCCTAAGCCTAATGGCTATCAAAGTCTTCATACAACAGTGATTCCATTT
CTTTATGAGAGCATGTTTCGTTTGGAGGTTCAGATAAGAACTGAAGAGATGGACCTCATA
GCTGAAAGAGGCATTGCTGCACATTACAGTGGGAAAGGTTTTGTAAATGGTTTAGTTGGG
CATGTTATAACCAATGATAAAAGTTCTGGAGGGAAAATAGTCTGCCTTAACAATGCCAAT
ATTGCTCTCAGGATTGGCTGGCTGAATGCAATTAGGGAGTGGCAAGAAGAGTTCGTTGGA
AACATGAGCTCTAGGGAATTTGTGGACACTGTTACCAGAGATCTGTTGGGCAGTCGTGTC
TTTGTCTTTACACCCGGAGGAGAGATAAAACATCTCCCAAAGGGGGCTACTGTCATTGAT
TACGCATATATGATACACACTGAAATTGGCAATAAAATGGTGGCTGCTAAGGTGAATGGT
AATCTTGTCAAACCAATGCATGTACTTGCAAACGCAGAAGTTGTAGAGATTATCACTTAC
AATGGTCTCTCCAGCAAGTCTGCTTTCGAGAGACATAAACAGTGGCTTCAACATGCAAAA
ACTCGTTGCGCCCGGCACAAGATTATGAAATTTTTGAGAGAGCAAGCTGCACTATCAGCA
TCTGAAATAACTGTGGATTCAGTTAAGGAATTTGCTGCTGAGTCTGAAGGGGACAGCACA
GTGGAAGAATTAGCAGATTACTCAAAGGGAACCAAACATTCATGGGAGAAAATCCTCAAG
AATGTTATGGAGGTATCATCTGCAAGGATAAATAGTGAAGATATTTTCCAACTCCGTAGT
GGTAGTATTCAAATTCCCAAGGTGAATGGGAAACATAATAAGTGCATGCAGCATACGAGT
TTGAAGGCCACAGGGGAGACATTGTCACAAGGAAATGGTGTTGGTGAAATGATACTTGCT
AACATACCAAGGTACAGGGATGTTCTGCCCGGATTGGACGGCTGGCTGGCTAGCAAAGTT
GCAACTTGGCAGAACCTTGAAGGGCACTCTGTCCAGTGGTTTTGTGTTGTCAGCATAGAT
CGAAAAGGCATGATGGCGGATATTACTTCAGCATTGGCAGCTGTAGGCGTCACCATATGT
TCTTGTGCGGCTGAGACGGATAGAGAAAAGGGGATTGGTGTCGCACTATTTCATATTGAA
GCAGACCTAGAGAGCTTGGTTGGTGCAAGTTTGAAGATTGACATGATCCTAGGTGTTTTG
GGATGGTCCACGGGCTGCAGTTGGTCAGAGAACAAACAGTTTCTAGAATGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055074
PEP Infomation

pacid=37454888 transcript=PGSC0003DMT400081393 locus=PGSC0003DMG400031817 ID=PGSC0003DMT400081393.v4.03 annot-version=v4.03
Sequence

MASATSMSVSIECVNICKSWKGDVSGRLDCSALSCAWKAPRALTGFLASTTHPTQCSSTR
FGRYGRRDRLRRCRCYTSDMDERYPVEVLRGVPGSMLLLSASSKWKLCCSSSFSSESYVA
ISPESLWEDLKPTISYLSCKELELVRKALNLAFEAHDGQKRRSGEPFIIHPVAVAQILGQ
LELDWESVAAGLLHDTVEDTDVVTFERIEKEFGATVRRIVEGETKVSKLGKIKCKDESHV
QDVKADDLRQMFLSMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSGIATETLQVFAPLAK
LLGIYQIKSELENLAFMYTNAQDYARVQRRIAELYKEHEKEIEEAKRILMKKIEEDQFLE
LVTVKTEIQSICKEPYSIYKAVLKSKSSINEVNQIAQLRIIIKPKPCVGVRPLCNAQQIC
YHLLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLI
AERGIAAHYSGKGFVNGLVGHVITNDKSSGGKIVCLNNANIALRIGWLNAIREWQEEFVG
NMSSREFVDTVTRDLLGSRVFVFTPGGEIKHLPKGATVIDYAYMIHTEIGNKMVAAKVNG
NLVKPMHVLANAEVVEIITYNGLSSKSAFERHKQWLQHAKTRCARHKIMKFLREQAALSA
SEITVDSVKEFAAESEGDSTVEELADYSKGTKHSWEKILKNVMEVSSARINSEDIFQLRS
GSIQIPKVNGKHNKCMQHTSLKATGETLSQGNGVGEMILANIPRYRDVLPGLDGWLASKV
ATWQNLEGHSVQWFCVVSIDRKGMMADITSALAAVGVTICSCAAETDREKGIGVALFHIE
ADLESLVGASLKIDMILGVLGWSTGCSWSENKQFLEC*

Transcript Sequence

Transcript ID

PGSC0003DMT400081393
Transcript Infomation

pacid=37454888 locus=PGSC0003DMG400031817 ID=PGSC0003DMT400081393.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGCTACTTCAATGTCAGTTTCTATCGAATGTGTGAATATATGTAAGTCTTGG
AAAGGAGATGTGAGTGGAAGACTCGACTGTAGTGCGTTATCTTGTGCCTGGAAGGCACCA
AGGGCCTTGACTGGATTCCTTGCAAGCACAACTCATCCTACTCAGTGTTCCTCTACTCGT
TTTGGGAGATATGGAAGAAGAGATCGTCTCCGCCGATGTAGATGTTATACTTCTGATATG
GATGAACGCTACCCTGTTGAAGTTCTGCGAGGAGTCCCTGGCTCAATGCTTCTACTATCT
GCTTCTAGCAAATGGAAATTGTGTTGCTCTTCATCATTTTCTTCAGAGTCGTATGTAGCG
ATATCTCCTGAAAGTTTGTGGGAGGATCTTAAACCTACTATTTCATATCTTTCTTGCAAG
GAATTGGAATTGGTTCGTAAGGCTTTGAATCTTGCTTTTGAGGCACATGATGGTCAAAAG
CGTCGTAGTGGAGAGCCCTTTATTATTCACCCAGTTGCAGTTGCACAGATCCTTGGACAG
CTTGAATTGGATTGGGAGTCGGTTGCTGCTGGGTTATTACATGATACTGTAGAGGACACA
GATGTAGTTACTTTTGAAAGAATAGAGAAGGAATTTGGTGCAACAGTTCGCCGTATTGTT
GAAGGGGAGACTAAGGTATCCAAGCTGGGAAAGATCAAGTGCAAGGATGAAAGCCATGTA
CAGGATGTCAAAGCTGATGACCTTAGGCAGATGTTTCTTTCCATGACAGAGGAGGTCCGT
GTTATAATTGTCAAATTAGCTGATAGATTACATAACATGCGCACTCTTTCACACATGCCT
CCACACAAGCAGTCTGGAATCGCAACAGAGACGCTGCAGGTTTTTGCTCCTTTGGCAAAA
CTTCTCGGAATATACCAAATCAAGTCAGAGCTTGAAAACTTAGCATTTATGTATACAAAT
GCTCAAGATTATGCCAGGGTGCAGCGTAGGATTGCAGAACTTTATAAAGAACATGAAAAG
GAAATTGAAGAGGCAAAAAGAATATTGATGAAGAAAATAGAGGAAGACCAATTCCTAGAA
CTTGTGACTGTGAAGACGGAAATTCAATCAATATGCAAGGAACCTTACAGCATCTACAAA
GCAGTACTCAAGTCTAAGAGTTCAATAAACGAAGTAAACCAAATTGCACAGCTTCGAATT
ATTATAAAACCAAAGCCTTGTGTCGGAGTTAGGCCCCTTTGCAATGCACAGCAGATATGC
TATCATCTGCTTGGACTAGTACATGGAATCTGGACACCTATCCCTCGTGCTATGAAAGAC
TACATTGCCACCCCTAAGCCTAATGGCTATCAAAGTCTTCATACAACAGTGATTCCATTT
CTTTATGAGAGCATGTTTCGTTTGGAGGTTCAGATAAGAACTGAAGAGATGGACCTCATA
GCTGAAAGAGGCATTGCTGCACATTACAGTGGGAAAGGTTTTGTAAATGGTTTAGTTGGG
CATGTTATAACCAATGATAAAAGTTCTGGAGGGAAAATAGTCTGCCTTAACAATGCCAAT
ATTGCTCTCAGGATTGGCTGGCTGAATGCAATTAGGGAGTGGCAAGAAGAGTTCGTTGGA
AACATGAGCTCTAGGGAATTTGTGGACACTGTTACCAGAGATCTGTTGGGCAGTCGTGTC
TTTGTCTTTACACCCGGAGGAGAGATAAAACATCTCCCAAAGGGGGCTACTGTCATTGAT
TACGCATATATGATACACACTGAAATTGGCAATAAAATGGTGGCTGCTAAGGTGAATGGT
AATCTTGTCAAACCAATGCATGTACTTGCAAACGCAGAAGTTGTAGAGATTATCACTTAC
AATGGTCTCTCCAGCAAGTCTGCTTTCGAGAGACATAAACAGTGGCTTCAACATGCAAAA
ACTCGTTGCGCCCGGCACAAGATTATGAAATTTTTGAGAGAGCAAGCTGCACTATCAGCA
TCTGAAATAACTGTGGATTCAGTTAAGGAATTTGCTGCTGAGTCTGAAGGGGACAGCACA
GTGGAAGAATTAGCAGATTACTCAAAGGGAACCAAACATTCATGGGAGAAAATCCTCAAG
AATGTTATGGAGGTATCATCTGCAAGGATAAATAGTGAAGATATTTTCCAACTCCGTAGT
GGTAGTATTCAAATTCCCAAGGTGAATGGGAAACATAATAAGTGCATGCAGCATACGAGT
TTGAAGGCCACAGGGGAGACATTGTCACAAGGAAATGGTGTTGGTGAAATGATACTTGCT
AACATACCAAGGTACAGGGATGTTCTGCCCGGATTGGACGGCTGGCTGGCTAGCAAAGTT
GCAACTTGGCAGAACCTTGAAGGGCACTCTGTCCAGTGGTTTTGTGTTGTCAGCATAGAT
CGAAAAGGCATGATGGCGGATATTACTTCAGCATTGGCAGCTGTAGGCGTCACCATATGT
TCTTGTGCGGCTGAGACGGATAGAGAAAAGGGGATTGGTGTCGCACTATTTCATATTGAA
GCAGACCTAGAGAGCTTGGTTGGTGCAAGTTTGAAGATTGACATGATCCTAGGTGTTTTG
GGATGGTCCACGGGCTGCAGTTGGTCAGAGAACAAACAGTTTCTAGAATGCTAA