Plant GARDEN
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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081369
CDS Infomation

pacid=37455335 polypeptide=PGSC0003DMP400055053 locus=PGSC0003DMG400031808 ID=PGSC0003DMT400081369.v4.03 annot-version=v4.03
Sequence

ATGGCGCCTTTACAAGGAGTTGTAGCTATGGATGGAAGCACAGTTTCTTCTGCTGCTCCA
ATGCAGCCTCTATTCTCTCAACCAAGGCCAAAAAGATGTGCAACACATTGTTACATTGCT
AGGAACATACATTGTCTTCAGCAATTCATGAAGATGCATCCTTTCTGGCCCCCTGCTGCT
GGCGCTGCACCCTTCTTTGGAGCCAAGACCAATCTTAATGTTATGCCATCGGCTGATCTC
CATGGAAACTTAGCTGGTAGGGGAGCAAGTGCTGGGCCAGATAAGGGGCAGGGGATTGCT
ATCTTCCCTAGTAATGGCGGAAAAGACAAAGTTCAACCAGCTAACATTGCAGATGCTGCT
CAGAGAAAGCAGCAAATGTTACTCCAACAAGCTTTGCCGCCTGTTGCGCCTAATAATCTA
CTGCATGGGCCTGCTTTCATCTTCCCTTTGAATCAACAACAGGCAGCTGCAGCTGCTGCT
GTTCGACCAGGTCCCGTGAAGTCACCTAGCACAATGGGCCCTTCTGTCCCTTCTAACACA
CCTAATGCTGCTGCTGGAACTGCTTCAGCTACAGCTGGTGGAGCTGCTACTGCAATTAGC
TTCAACTATCCAAATATGTCTCCTAATGATGCTCAGTATTTGGCGATCTTGCAGAATAAC
GCGTATGCTTTCCCGATACCAGCTGTAGGACCACCTCCGAATTATCGAGGAACTCATCCT
CAGCCCATGCCATTGTTCAATGGATCTTTCTATTCTTCCCAGATGATTCATCCTTCCCAG
GTTCAGCAACATCAACAGCAGCATCAACAACAACAGCATCAGCAACATCATCAGCATCAG
CATCAGCATCAGCAACATCAACAGCAGCAGCATCAACAACAACAACAGCAACATCAGCAA
CATCAACAGCAGCAGCATCAGCAACAGCAGCAGCCAGCAACATCGCAGTCCCAACAAATG
CAACAAGGTCAACAAAACACAAGCATGTCAAGTGGATCCTCTTCGTCCCATAAGCATTTG
CAGAACCAGCAACAGAGGTCCCAAGGCAATGCTGTTAATGGTGGGAACGGTGGTGGTAAT
TTGCATAATTTTCCTGGGACAAAAAATCATCCATCTCAGTCCCCAGCACAGTCGTCACAG
AATCAGCATATGCCTCCACAGACGCGCCATATCGAAAATGAGGTGGGTAGTGAAGATAGC
CCAACTGCAGAGAGGAAAAGGTCGCATGGACCAATTAATGTGTACAATCAGAATTTTGCT
ATGCCCATGCATCCCTCAAACTTTGGTATGATGACTCCTCCAGCTAACTTTGGTGTTGCC
TCTTCTGCTGGTAGCGGCAGTAATCATCAAACTGAGAAGAAGCCACAGCAGCAGCAGCCA
GGTCTAAAAACGAGTCTAGAGTCGGTGCCGACTCAACCTTTTGCCATGTCGTTTGCTTCA
TTTAATGGAGCCACTGCTGGACCTGGCATTGACATGTCCATGGCACATAATCATGCTATT
TTCCAGAGTCTCCCTGAAGCTACAAGGCAAAATTTACAGATGGCCGCTGCAGCTGCTGCT
CAGGCTGTGCAGCAGCAGAAGAATTTCAGAGTATCGGAGGATGGTAAATCTGGATCTGGT
GACCAGTCTGGGGCTGATGCTGAAAGAAAAGGTTTAGCAATGAAGCCTTCAGGAAATGCT
GGTCAGTCTATTGCATTTTCAAGGTCCGATACATCTGATGCCTCTGGGTCTACTGTTGCA
GCCAACAGTGTCATTGATAGCTCATCTAGGTCCTTAAATCTTCCATCTGGTGCTTCATGG
ACTGCTCGAGCTGCAATGCCAAATGCTATGGGAGCTGTAAATGTTCCTAATGCACAGTTG
CAAGCTCAAATTCAGCAACAGCAGCAACAAATGCTTCAGCTTCATAAGCAGCAGCAACAG
CAACAACAACATCAGTTTGCAGCGGCTGGTGCTGCTCGGAGTAAGACATCAGCCTCTAGT
AATGGGAATGTTTATTCGGAACACTTGACTTCATCTGCTTCTGCTGCTTCAAAATTTCCA
AATGCAATGTCTGCTTTTCCTCAAAATCTTGTACAGAGTGGTAACAACAGCAGTCAAGCT
CAGTCACCTCAGTGGAAGAACTCTAGCAGAACATCAACATCCCAAGCTCCATCATCTTTG
TCATCGACTTCTTCTCTGAAAACCCTTTCTCAGCAGCAGCAGCAGCACATTAGATCCCAG
CAAAGTCACACACAGATATCTTTTGGCACGAATCAGAGATCCACTCCTCCTCCACCAGGA
CAACAGCCCCCAAACAATAATCAGTCTCCCTCTTCCCCCATGATGGTTGGCTCTCCTACC
ACTTCTTCAATCTCAAAAGGTGCCAGTGGAAGCCCAAGACCTACAAATTCTGCAACTACA
AGTAATAAAACCGGCCAGAACTCATCATTGTCAACGCAGCAGGGGAAATCCTCGTCTTCA
GTTCCCAACCAGAAGTCATCTCCAGCTGGTGGGAGGAATGTGCCATCAATTCTTGGAAAC
CCTCATAATATAGCTTCAACTTCAGGTGGTGGAACTAAGTCTCAAATGTCACAGCAGCAA
CAACAGCAACAACAGCAACATTTACATAAGAGTATGCAGCAAGCACAGCTGTTCTTCTCA
AGTCCATATGTGCAAGCTCAACCTCCACATTCTACTGGTACAAGTTCTACGGGTCAAGCT
ACTGGGGGATATTATCTTCAGCAGAGACGGCGTCCTGACCAGCCTGGCCAACAACTGCCT
GGTTCATCAGCTGCATCATCATCAAGTGGGATGTTGACTTTGTGTCCTGTTACTCTAGGT
GGTGGCACCACTTCTGATCCTGCCAAAGCAATTGCTGCTGCTGCGGCTGCTAATAATATG
AAAGGTGGTGTGTTGCCTTCGCAGGGCATGCTTCATGCTGCCCAATATACAACACAAACA
TCAGGAAGTCAACACCAGCTTTTGCCTGCTGGTTTCTCTTATGTGCACCCTGTTCCTGCG
GCGGTTCAAGTGAAGCCAGCTGAACAGAAACAACCTGCGGGTGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400055053
PEP Infomation

pacid=37455335 transcript=PGSC0003DMT400081369 locus=PGSC0003DMG400031808 ID=PGSC0003DMT400081369.v4.03 annot-version=v4.03
Sequence

MAPLQGVVAMDGSTVSSAAPMQPLFSQPRPKRCATHCYIARNIHCLQQFMKMHPFWPPAA
GAAPFFGAKTNLNVMPSADLHGNLAGRGASAGPDKGQGIAIFPSNGGKDKVQPANIADAA
QRKQQMLLQQALPPVAPNNLLHGPAFIFPLNQQQAAAAAAVRPGPVKSPSTMGPSVPSNT
PNAAAGTASATAGGAATAISFNYPNMSPNDAQYLAILQNNAYAFPIPAVGPPPNYRGTHP
QPMPLFNGSFYSSQMIHPSQVQQHQQQHQQQQHQQHHQHQHQHQQHQQQQHQQQQQQHQQ
HQQQQHQQQQQPATSQSQQMQQGQQNTSMSSGSSSSHKHLQNQQQRSQGNAVNGGNGGGN
LHNFPGTKNHPSQSPAQSSQNQHMPPQTRHIENEVGSEDSPTAERKRSHGPINVYNQNFA
MPMHPSNFGMMTPPANFGVASSAGSGSNHQTEKKPQQQQPGLKTSLESVPTQPFAMSFAS
FNGATAGPGIDMSMAHNHAIFQSLPEATRQNLQMAAAAAAQAVQQQKNFRVSEDGKSGSG
DQSGADAERKGLAMKPSGNAGQSIAFSRSDTSDASGSTVAANSVIDSSSRSLNLPSGASW
TARAAMPNAMGAVNVPNAQLQAQIQQQQQQMLQLHKQQQQQQQHQFAAAGAARSKTSASS
NGNVYSEHLTSSASAASKFPNAMSAFPQNLVQSGNNSSQAQSPQWKNSSRTSTSQAPSSL
SSTSSLKTLSQQQQQHIRSQQSHTQISFGTNQRSTPPPPGQQPPNNNQSPSSPMMVGSPT
TSSISKGASGSPRPTNSATTSNKTGQNSSLSTQQGKSSSSVPNQKSSPAGGRNVPSILGN
PHNIASTSGGGTKSQMSQQQQQQQQQHLHKSMQQAQLFFSSPYVQAQPPHSTGTSSTGQA
TGGYYLQQRRRPDQPGQQLPGSSAASSSSGMLTLCPVTLGGGTTSDPAKAIAAAAAANNM
KGGVLPSQGMLHAAQYTTQTSGSQHQLLPAGFSYVHPVPAAVQVKPAEQKQPAGE*

Transcript Sequence

Transcript ID

PGSC0003DMT400081369
Transcript Infomation

pacid=37455335 locus=PGSC0003DMG400031808 ID=PGSC0003DMT400081369.v4.03 annot-version=v4.03
Sequence

ATGGCGCCTTTACAAGGAGTTGTAGCTATGGATGGAAGCACAGTTTCTTCTGCTGCTCCA
ATGCAGCCTCTATTCTCTCAACCAAGGCCAAAAAGATGTGCAACACATTGTTACATTGCT
AGGAACATACATTGTCTTCAGCAATTCATGAAGATGCATCCTTTCTGGCCCCCTGCTGCT
GGCGCTGCACCCTTCTTTGGAGCCAAGACCAATCTTAATGTTATGCCATCGGCTGATCTC
CATGGAAACTTAGCTGGTAGGGGAGCAAGTGCTGGGCCAGATAAGGGGCAGGGGATTGCT
ATCTTCCCTAGTAATGGCGGAAAAGACAAAGTTCAACCAGCTAACATTGCAGATGCTGCT
CAGAGAAAGCAGCAAATGTTACTCCAACAAGCTTTGCCGCCTGTTGCGCCTAATAATCTA
CTGCATGGGCCTGCTTTCATCTTCCCTTTGAATCAACAACAGGCAGCTGCAGCTGCTGCT
GTTCGACCAGGTCCCGTGAAGTCACCTAGCACAATGGGCCCTTCTGTCCCTTCTAACACA
CCTAATGCTGCTGCTGGAACTGCTTCAGCTACAGCTGGTGGAGCTGCTACTGCAATTAGC
TTCAACTATCCAAATATGTCTCCTAATGATGCTCAGTATTTGGCGATCTTGCAGAATAAC
GCGTATGCTTTCCCGATACCAGCTGTAGGACCACCTCCGAATTATCGAGGAACTCATCCT
CAGCCCATGCCATTGTTCAATGGATCTTTCTATTCTTCCCAGATGATTCATCCTTCCCAG
GTTCAGCAACATCAACAGCAGCATCAACAACAACAGCATCAGCAACATCATCAGCATCAG
CATCAGCATCAGCAACATCAACAGCAGCAGCATCAACAACAACAACAGCAACATCAGCAA
CATCAACAGCAGCAGCATCAGCAACAGCAGCAGCCAGCAACATCGCAGTCCCAACAAATG
CAACAAGGTCAACAAAACACAAGCATGTCAAGTGGATCCTCTTCGTCCCATAAGCATTTG
CAGAACCAGCAACAGAGGTCCCAAGGCAATGCTGTTAATGGTGGGAACGGTGGTGGTAAT
TTGCATAATTTTCCTGGGACAAAAAATCATCCATCTCAGTCCCCAGCACAGTCGTCACAG
AATCAGCATATGCCTCCACAGACGCGCCATATCGAAAATGAGGTGGGTAGTGAAGATAGC
CCAACTGCAGAGAGGAAAAGGTCGCATGGACCAATTAATGTGTACAATCAGAATTTTGCT
ATGCCCATGCATCCCTCAAACTTTGGTATGATGACTCCTCCAGCTAACTTTGGTGTTGCC
TCTTCTGCTGGTAGCGGCAGTAATCATCAAACTGAGAAGAAGCCACAGCAGCAGCAGCCA
GGTCTAAAAACGAGTCTAGAGTCGGTGCCGACTCAACCTTTTGCCATGTCGTTTGCTTCA
TTTAATGGAGCCACTGCTGGACCTGGCATTGACATGTCCATGGCACATAATCATGCTATT
TTCCAGAGTCTCCCTGAAGCTACAAGGCAAAATTTACAGATGGCCGCTGCAGCTGCTGCT
CAGGCTGTGCAGCAGCAGAAGAATTTCAGAGTATCGGAGGATGGTAAATCTGGATCTGGT
GACCAGTCTGGGGCTGATGCTGAAAGAAAAGGTTTAGCAATGAAGCCTTCAGGAAATGCT
GGTCAGTCTATTGCATTTTCAAGGTCCGATACATCTGATGCCTCTGGGTCTACTGTTGCA
GCCAACAGTGTCATTGATAGCTCATCTAGGTCCTTAAATCTTCCATCTGGTGCTTCATGG
ACTGCTCGAGCTGCAATGCCAAATGCTATGGGAGCTGTAAATGTTCCTAATGCACAGTTG
CAAGCTCAAATTCAGCAACAGCAGCAACAAATGCTTCAGCTTCATAAGCAGCAGCAACAG
CAACAACAACATCAGTTTGCAGCGGCTGGTGCTGCTCGGAGTAAGACATCAGCCTCTAGT
AATGGGAATGTTTATTCGGAACACTTGACTTCATCTGCTTCTGCTGCTTCAAAATTTCCA
AATGCAATGTCTGCTTTTCCTCAAAATCTTGTACAGAGTGGTAACAACAGCAGTCAAGCT
CAGTCACCTCAGTGGAAGAACTCTAGCAGAACATCAACATCCCAAGCTCCATCATCTTTG
TCATCGACTTCTTCTCTGAAAACCCTTTCTCAGCAGCAGCAGCAGCACATTAGATCCCAG
CAAAGTCACACACAGATATCTTTTGGCACGAATCAGAGATCCACTCCTCCTCCACCAGGA
CAACAGCCCCCAAACAATAATCAGTCTCCCTCTTCCCCCATGATGGTTGGCTCTCCTACC
ACTTCTTCAATCTCAAAAGGTGCCAGTGGAAGCCCAAGACCTACAAATTCTGCAACTACA
AGTAATAAAACCGGCCAGAACTCATCATTGTCAACGCAGCAGGGGAAATCCTCGTCTTCA
GTTCCCAACCAGAAGTCATCTCCAGCTGGTGGGAGGAATGTGCCATCAATTCTTGGAAAC
CCTCATAATATAGCTTCAACTTCAGGTGGTGGAACTAAGTCTCAAATGTCACAGCAGCAA
CAACAGCAACAACAGCAACATTTACATAAGAGTATGCAGCAAGCACAGCTGTTCTTCTCA
AGTCCATATGTGCAAGCTCAACCTCCACATTCTACTGGTACAAGTTCTACGGGTCAAGCT
ACTGGGGGATATTATCTTCAGCAGAGACGGCGTCCTGACCAGCCTGGCCAACAACTGCCT
GGTTCATCAGCTGCATCATCATCAAGTGGGATGTTGACTTTGTGTCCTGTTACTCTAGGT
GGTGGCACCACTTCTGATCCTGCCAAAGCAATTGCTGCTGCTGCGGCTGCTAATAATATG
AAAGGTGGTGTGTTGCCTTCGCAGGGCATGCTTCATGCTGCCCAATATACAACACAAACA
TCAGGAAGTCAACACCAGCTTTTGCCTGCTGGTTTCTCTTATGTGCACCCTGTTCCTGCG
GCGGTTCAAGTGAAGCCAGCTGAACAGAAACAACCTGCGGGTGAGTAG