Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081335
CDS Infomation

pacid=37456538 polypeptide=PGSC0003DMP400055036 locus=PGSC0003DMG400031799 ID=PGSC0003DMT400081335.v4.03 annot-version=v4.03
Sequence

ATGGCGACAAGGAATCGAATTAGGGTTTTCCAAAGTTACAGAGATACCTTGAACGAGAAC
CGTATACCCTTCACTTCTTCAAATGATTCCGGTGGTCCAGTAATCGAAATGGCTACTACT
TCTTTTCTCAATTCTAATCGTTCTTACGCTCCTCTAAGCACCGAAGATGATCTGGGTCCT
TCTACATCCAGAGATGCATTTACAGTGGGCTTACCTCCAGCATGGGTTGATGTTTCTGAA
GAAGTTGCAGCTAGCATACATCAGTCTCAAGTAAAATTGGCAGAACTAAAGAAGTGCCAT
GCTAAAGCTCTGACTCCATCTTTTGGTGATGGAAGAGAAGATCAAAATGTGATAGAGGTT
CTGACCATGGAGATTACAGATATATTAAGGAAGTCAGAGAAGAGATTACAGAAGCTTTCA
GCAAGTGGTTCTTGTGAGGATTCAAATGTTAGAAAAAATGTACAGCGTTCTCTGGCTACA
GACCTTCAAAACCTTTCTGTTGAGCTCCGGAGGATGCAATCATTGTATCTTAAACAGTTA
CGGCAGCAATCAGAGGCACATGATGGACTTGATTTGGAGATGAATGAAAAGAAGTCTAGC
TTTCTGGATGACAATTTCAATGACGTGGGGTTCACTGAACTGCAGATGGCCACTGGTCAG
AAGGATGAGCAGTTCACGGCAGAGAGAGAAAGAGAGATTAGACAGGTCCTTAAATCAGTT
AATGAGCTTTCCCAAATCATGAAGGATCTGTCAGTCCTAGTTATTGATCAGGGGACAATA
GTTGATCGGATAGACCACAATGTTCAAAGTGTATCTGCATCAGTAGAGGAAGGTTTCAAA
CAACTACAGAAGGCAGAGAGGTCTCAGAGGAAGGGGGGAATGGTGAAATGTGCGACTGTT
CTTGTTATCATGTGCTTCGTTATGCTAGTCCTGTTGGTCCTTAAGCATATTCTCTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400055036
PEP Infomation

pacid=37456538 transcript=PGSC0003DMT400081335 locus=PGSC0003DMG400031799 ID=PGSC0003DMT400081335.v4.03 annot-version=v4.03
Sequence

MATRNRIRVFQSYRDTLNENRIPFTSSNDSGGPVIEMATTSFLNSNRSYAPLSTEDDLGP
STSRDAFTVGLPPAWVDVSEEVAASIHQSQVKLAELKKCHAKALTPSFGDGREDQNVIEV
LTMEITDILRKSEKRLQKLSASGSCEDSNVRKNVQRSLATDLQNLSVELRRMQSLYLKQL
RQQSEAHDGLDLEMNEKKSSFLDDNFNDVGFTELQMATGQKDEQFTAEREREIRQVLKSV
NELSQIMKDLSVLVIDQGTIVDRIDHNVQSVSASVEEGFKQLQKAERSQRKGGMVKCATV
LVIMCFVMLVLLVLKHILL*

Transcript Sequence

Transcript ID

PGSC0003DMT400081335
Transcript Infomation

pacid=37456538 locus=PGSC0003DMG400031799 ID=PGSC0003DMT400081335.v4.03 annot-version=v4.03
Sequence

ATGGCGACAAGGAATCGAATTAGGGTTTTCCAAAGTTACAGAGATACCTTGAACGAGAAC
CGTATACCCTTCACTTCTTCAAATGATTCCGGTGGTCCAGTAATCGAAATGGCTACTACT
TCTTTTCTCAATTCTAATCGTTCTTACGCTCCTCTAAGCACCGAAGATGATCTGGGTCCT
TCTACATCCAGAGATGCATTTACAGTGGGCTTACCTCCAGCATGGGTTGATGTTTCTGAA
GAAGTTGCAGCTAGCATACATCAGTCTCAAGTAAAATTGGCAGAACTAAAGAAGTGCCAT
GCTAAAGCTCTGACTCCATCTTTTGGTGATGGAAGAGAAGATCAAAATGTGATAGAGGTT
CTGACCATGGAGATTACAGATATATTAAGGAAGTCAGAGAAGAGATTACAGAAGCTTTCA
GCAAGTGGTTCTTGTGAGGATTCAAATGTTAGAAAAAATGTACAGCGTTCTCTGGCTACA
GACCTTCAAAACCTTTCTGTTGAGCTCCGGAGGATGCAATCATTGTATCTTAAACAGTTA
CGGCAGCAATCAGAGGCACATGATGGACTTGATTTGGAGATGAATGAAAAGAAGTCTAGC
TTTCTGGATGACAATTTCAATGACGTGGGGTTCACTGAACTGCAGATGGCCACTGGTCAG
AAGGATGAGCAGTTCACGGCAGAGAGAGAAAGAGAGATTAGACAGGTCCTTAAATCAGTT
AATGAGCTTTCCCAAATCATGAAGGATCTGTCAGTCCTAGTTATTGATCAGGGGACAATA
GTTGATCGGATAGACCACAATGTTCAAAGTGTATCTGCATCAGTAGAGGAAGGTTTCAAA
CAACTACAGAAGGCAGAGAGGTCTCAGAGGAAGGGGGGAATGGTGAAATGTGCGACTGTT
CTTGTTATCATGTGCTTCGTTATGCTAGTCCTGTTGGTCCTTAAGCATATTCTCTTATAA