Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081312
CDS Infomation

pacid=37456282 polypeptide=PGSC0003DMP400055021 locus=PGSC0003DMG400031791 ID=PGSC0003DMT400081312.v4.03 annot-version=v4.03
Sequence

ATGTACAATCTCAAATGGAAAACTCCATTGCTGCTTTCTCTTTTAGCTATCTCAGCTATC
GTCTGTCTCACATTCTTCACCTCTCTCTCAAAAAACTCTTCAGAAACAGTACACATTCAT
GTTCACAAAAACATTCAAATCGCGCATTCTCATTGTGAAGACGCACTTTACAAACAGCTC
TGCGTCTCTACTCTCTCTTCAATCCCAGATCTCCCTCAAAAATCCATTTCTCAAATAATT
TCTTCCACTATCAATGTCACAGTGGTAGAAGTCAAAGCTTCTGCAAAAAACTGCACTGAT
ATTCGAGAGGATTTGCCTAAACTTGAGCCATACGAAAAACGTGCTCTCGAAGATTGCATT
CAGCTTTTGGATAATACTATTATTGATCTTAAAAGTAGTTTGCTTGCTCTTTCTCCTAAT
AGATCTCTTTCGCAGAACTATAACGATTTGCAAACTCTTCTTAGTGCTGCAATGACGAAT
CAAGCAACTTGCCTCGACGGACTTGGTCGTAGTAAGAAGAATTTGAGACGGTTTGTTCAG
CGTCGCCTGCATACAATTTCTCACCATGTGAGTAATTGTCTGGCAATGCTGAAGAAATTG
AAGAAATCATCCTCGTCGTTGAAGACGAGGAAATCTCTGGAGATTTACCCAGAATATGGC
GTTGTACATGACGGTTTCCCCAAATGGATTAAGAGGAGAGACAGAGCACTTTTACAAGCT
CCGATTAATCAGACGAAGATCGATTTGGTTGTTGCTAAGGATGGTACTGGTAATTTTAGT
ACAATTAACGAAGCATTAAGTGCAGCTCCAAATTCCAGTAGAACGAGATTTGTGATTTAC
ATTAAGGCGGGAGCGTATTTTGAATATGTTGAAGTAGTGAAAAAGCAGAGCATGATAATG
TTCCTCGGAGATGGGATCGGAAAAACTCTGATAAAGGGAAATCGTAGCGTCGTTGATGGA
TGGACTACTTTTCGATCTGCTACCGTCGCTGTTGTGGGAAATGGATTTTTAGCAAAGGGC
ATTACATTTGAAAACTATGCTGGACCAAGCAAGCATCAAGCAGTTGCTGTTAGAAGTGGC
TCAGATTTCTCTGCTTTCTACCAATGCAGCTTTGTAGCATATCAAGACACTCTCTACGTC
CATTCCCTTCGACAATTCTATCGTGATTGTGACGTTTATGGTACTGTAGACTTCATATTT
GGTAACGCAGCAGTCGTGTTACAAAATTGCAACTTATATGCTCGTAAACCAAACGACAAC
CAAAAAAACATATTCACAGCACAAGGAAGAGAAGATCCTAATCAGAACACCGGGATTTCA
ATTTTGAGTGGTAAAATTGCCTCTGCTGCTGATCTAATTCCAGTGGAATCGACGTTCAAA
AATTACTTAGGACGGCCTTGGAAAGAATATTCCAGAACGGTTTTTATGCTAACGCATATT
GGTAGCTTGATTGATCCTGCTGGATTCTTAGAATGGAATGGTAGTTTCGCGTTGAGTACG
CTTTATTATGGAGAGTATATGAACAGAGGACCGGGTTCTAATACGAGTGCTAGAGTGAAA
TGGCCTGGTTATAGGGTTATTAACAATTCTGCTGAGGCTAGTTTGTTTACTGTGGGGAAT
TTCATTGAAGGAAAAGAATGGCTACCAGATACTGGATTTCCATTTTATGTTAACTTAACT
GCCTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055021
PEP Infomation

pacid=37456282 transcript=PGSC0003DMT400081312 locus=PGSC0003DMG400031791 ID=PGSC0003DMT400081312.v4.03 annot-version=v4.03
Sequence

MYNLKWKTPLLLSLLAISAIVCLTFFTSLSKNSSETVHIHVHKNIQIAHSHCEDALYKQL
CVSTLSSIPDLPQKSISQIISSTINVTVVEVKASAKNCTDIREDLPKLEPYEKRALEDCI
QLLDNTIIDLKSSLLALSPNRSLSQNYNDLQTLLSAAMTNQATCLDGLGRSKKNLRRFVQ
RRLHTISHHVSNCLAMLKKLKKSSSSLKTRKSLEIYPEYGVVHDGFPKWIKRRDRALLQA
PINQTKIDLVVAKDGTGNFSTINEALSAAPNSSRTRFVIYIKAGAYFEYVEVVKKQSMIM
FLGDGIGKTLIKGNRSVVDGWTTFRSATVAVVGNGFLAKGITFENYAGPSKHQAVAVRSG
SDFSAFYQCSFVAYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAAVVLQNCNLYARKPNDN
QKNIFTAQGREDPNQNTGISILSGKIASAADLIPVESTFKNYLGRPWKEYSRTVFMLTHI
GSLIDPAGFLEWNGSFALSTLYYGEYMNRGPGSNTSARVKWPGYRVINNSAEASLFTVGN
FIEGKEWLPDTGFPFYVNLTAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400081312
Transcript Infomation

pacid=37456282 locus=PGSC0003DMG400031791 ID=PGSC0003DMT400081312.v4.03 annot-version=v4.03
Sequence

ATGTACAATCTCAAATGGAAAACTCCATTGCTGCTTTCTCTTTTAGCTATCTCAGCTATC
GTCTGTCTCACATTCTTCACCTCTCTCTCAAAAAACTCTTCAGAAACAGTACACATTCAT
GTTCACAAAAACATTCAAATCGCGCATTCTCATTGTGAAGACGCACTTTACAAACAGCTC
TGCGTCTCTACTCTCTCTTCAATCCCAGATCTCCCTCAAAAATCCATTTCTCAAATAATT
TCTTCCACTATCAATGTCACAGTGGTAGAAGTCAAAGCTTCTGCAAAAAACTGCACTGAT
ATTCGAGAGGATTTGCCTAAACTTGAGCCATACGAAAAACGTGCTCTCGAAGATTGCATT
CAGCTTTTGGATAATACTATTATTGATCTTAAAAGTAGTTTGCTTGCTCTTTCTCCTAAT
AGATCTCTTTCGCAGAACTATAACGATTTGCAAACTCTTCTTAGTGCTGCAATGACGAAT
CAAGCAACTTGCCTCGACGGACTTGGTCGTAGTAAGAAGAATTTGAGACGGTTTGTTCAG
CGTCGCCTGCATACAATTTCTCACCATGTGAGTAATTGTCTGGCAATGCTGAAGAAATTG
AAGAAATCATCCTCGTCGTTGAAGACGAGGAAATCTCTGGAGATTTACCCAGAATATGGC
GTTGTACATGACGGTTTCCCCAAATGGATTAAGAGGAGAGACAGAGCACTTTTACAAGCT
CCGATTAATCAGACGAAGATCGATTTGGTTGTTGCTAAGGATGGTACTGGTAATTTTAGT
ACAATTAACGAAGCATTAAGTGCAGCTCCAAATTCCAGTAGAACGAGATTTGTGATTTAC
ATTAAGGCGGGAGCGTATTTTGAATATGTTGAAGTAGTGAAAAAGCAGAGCATGATAATG
TTCCTCGGAGATGGGATCGGAAAAACTCTGATAAAGGGAAATCGTAGCGTCGTTGATGGA
TGGACTACTTTTCGATCTGCTACCGTCGCTGTTGTGGGAAATGGATTTTTAGCAAAGGGC
ATTACATTTGAAAACTATGCTGGACCAAGCAAGCATCAAGCAGTTGCTGTTAGAAGTGGC
TCAGATTTCTCTGCTTTCTACCAATGCAGCTTTGTAGCATATCAAGACACTCTCTACGTC
CATTCCCTTCGACAATTCTATCGTGATTGTGACGTTTATGGTACTGTAGACTTCATATTT
GGTAACGCAGCAGTCGTGTTACAAAATTGCAACTTATATGCTCGTAAACCAAACGACAAC
CAAAAAAACATATTCACAGCACAAGGAAGAGAAGATCCTAATCAGAACACCGGGATTTCA
ATTTTGAGTGGTAAAATTGCCTCTGCTGCTGATCTAATTCCAGTGGAATCGACGTTCAAA
AATTACTTAGGACGGCCTTGGAAAGAATATTCCAGAACGGTTTTTATGCTAACGCATATT
GGTAGCTTGATTGATCCTGCTGGATTCTTAGAATGGAATGGTAGTTTCGCGTTGAGTACG
CTTTATTATGGAGAGTATATGAACAGAGGACCGGGTTCTAATACGAGTGCTAGAGTGAAA
TGGCCTGGTTATAGGGTTATTAACAATTCTGCTGAGGCTAGTTTGTTTACTGTGGGGAAT
TTCATTGAAGGAAAAGAATGGCTACCAGATACTGGATTTCCATTTTATGTTAACTTAACT
GCCTCTTAA