Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081311
CDS Infomation

pacid=37455107 polypeptide=PGSC0003DMP400055020 locus=PGSC0003DMG400031790 ID=PGSC0003DMT400081311.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATACAGCACAAAAATGTCACCGTTAATGGAATCAAAATGCACGTAGCAGAA
ATTGGCGAAGGTCCAGCAGTTCTATTTCTACATGGCTTCCCTGAGTTATGGTACTCATGG
CGCCATCAATTGTTGTACTTTTCTAACAAAGGTTACAGAGCTATTGCACCTGATCTTCGT
GGTTACGGAGACACTGAAATTCCATCGGAAATCAGTAGCTATACTGCATTCCATATTGTT
GGTGACTTGATTGCTCTGTTAGATATTCTAGATCTAGAAAAAGTGTTCTTAGTTGGACAT
GATTGGGGTGCTCTAATTGCTTGGTTTTTCTGTTTGTTTCGTCCTGATCGAATTAAAGCT
TTGGTGAATCTGAGTTGTGAGTTACGGCCCAGAAATCCGTTGCGAAAACCGATTGATTGC
TTGAGGGAATTGCTTGGTGATGACTATTACATGTGCAGATTTCAGAAACCTGGGGAAGTG
GAAGAGGAGTTTGCTTCAATTGATACTGCAAAACTGATGATAGGATTTCTTACTTCACGT
GATACACGTCCACCTTGCATTCCCAAAGAGATTGGCTTTCATCAAGCCTTTGCTCAGTTA
CCAGCAACATTACCTTCTTGGCTAACACAAGAAGATGTCAATTATTATGTTGAGAAATTA
AACAAAACAGGCTTTACTGGAGGATTGAACTACTATAGAAATATGGACAAAAACTGGGAG
CTCACAGCCCCATTTAGTGGATGCAAAATTCAAGTCCCAACTAAGTTTGTGGTAGGTGAG
TTGGACCTGACATATCATATTCCTGGAATCAAGGAGTATATACACAATGGTGGATTCAAG
AAAGAAGTTCCAAGTTTGGAGGAAGTTGTTGTAATGGAGGGAGCAGCTCACTTCATCAAC
CAAGAAAAGCCTGATGAAATAAATGCCCACATTTATGATTTTATTCAGAAGTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400055020
PEP Infomation

pacid=37455107 transcript=PGSC0003DMT400081311 locus=PGSC0003DMG400031790 ID=PGSC0003DMT400081311.v4.03 annot-version=v4.03
Sequence

MEKIQHKNVTVNGIKMHVAEIGEGPAVLFLHGFPELWYSWRHQLLYFSNKGYRAIAPDLR
GYGDTEIPSEISSYTAFHIVGDLIALLDILDLEKVFLVGHDWGALIAWFFCLFRPDRIKA
LVNLSCELRPRNPLRKPIDCLRELLGDDYYMCRFQKPGEVEEEFASIDTAKLMIGFLTSR
DTRPPCIPKEIGFHQAFAQLPATLPSWLTQEDVNYYVEKLNKTGFTGGLNYYRNMDKNWE
LTAPFSGCKIQVPTKFVVGELDLTYHIPGIKEYIHNGGFKKEVPSLEEVVVMEGAAHFIN
QEKPDEINAHIYDFIQKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400081311
Transcript Infomation

pacid=37455107 locus=PGSC0003DMG400031790 ID=PGSC0003DMT400081311.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATACAGCACAAAAATGTCACCGTTAATGGAATCAAAATGCACGTAGCAGAA
ATTGGCGAAGGTCCAGCAGTTCTATTTCTACATGGCTTCCCTGAGTTATGGTACTCATGG
CGCCATCAATTGTTGTACTTTTCTAACAAAGGTTACAGAGCTATTGCACCTGATCTTCGT
GGTTACGGAGACACTGAAATTCCATCGGAAATCAGTAGCTATACTGCATTCCATATTGTT
GGTGACTTGATTGCTCTGTTAGATATTCTAGATCTAGAAAAAGTGTTCTTAGTTGGACAT
GATTGGGGTGCTCTAATTGCTTGGTTTTTCTGTTTGTTTCGTCCTGATCGAATTAAAGCT
TTGGTGAATCTGAGTTGTGAGTTACGGCCCAGAAATCCGTTGCGAAAACCGATTGATTGC
TTGAGGGAATTGCTTGGTGATGACTATTACATGTGCAGATTTCAGAAACCTGGGGAAGTG
GAAGAGGAGTTTGCTTCAATTGATACTGCAAAACTGATGATAGGATTTCTTACTTCACGT
GATACACGTCCACCTTGCATTCCCAAAGAGATTGGCTTTCATCAAGCCTTTGCTCAGTTA
CCAGCAACATTACCTTCTTGGCTAACACAAGAAGATGTCAATTATTATGTTGAGAAATTA
AACAAAACAGGCTTTACTGGAGGATTGAACTACTATAGAAATATGGACAAAAACTGGGAG
CTCACAGCCCCATTTAGTGGATGCAAAATTCAAGTCCCAACTAAGTTTGTGGTAGGTGAG
TTGGACCTGACATATCATATTCCTGGAATCAAGGAGTATATACACAATGGTGGATTCAAG
AAAGAAGTTCCAAGTTTGGAGGAAGTTGTTGTAATGGAGGGAGCAGCTCACTTCATCAAC
CAAGAAAAGCCTGATGAAATAAATGCCCACATTTATGATTTTATTCAGAAGTTTTAA