Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081273
CDS Infomation

pacid=37424978 polypeptide=PGSC0003DMP400054992 locus=PGSC0003DMG400031765 ID=PGSC0003DMT400081273.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCATTTCAGTTCCTCTCCTGGCCGTCCGATCACCTCCAACAAACCTCCCATTC
CCCTCAATCTTCAATCTTAACCGTCCATTTTCCACTTCACTCTCCTCCAATGCCTTCAGC
CATTTGAAAGTCTCAAGTTCTACTTCTAGTTCTAACCAAGCCGTCACTGAAACAACTTCT
ACCTCTAGCTCTACCATCAATGTCCAAAACGACGACGCTTTAGACACGACCCTTTTCGTT
ATTCGAGCCAAGAACCGAATTGGGCTTCTTCAAATCATTACCCGGGTATTCAAAGTACTC
GGGCTCAAAATTGAGAAGGCTATTATTGAATTCGAAGGTGAGTTTTTCGTGAAGAAGTTT
TACGTCAATGATTCTAATGGTAAGAAGATTGAGAAAATGGAGTATTTGGAGAAGATTCAG
AAGGCATTGTTGGAGGCTATCGACGGCGATGACGGTGGCGCCGGAGTTTCGGCGCCGTCG
GCAGTTAGTGGGAGAGGGGTGGTTGTGAGGAAACCTGGGTTGAATATGGAATTAGGAGGC
AGGAAGGCGAAAGTAGAGAAGATGTTTGGGTTGATGGATGAGTTCTTGAAGAATGATTCA
ATTAGCTTACAGAAGGATATTCTTGATCATGTTGAATTTACTGTAGCTAGGTCAAGGTTC
AGTTTTGATGATTTTGAAGCTTACCAGGCATTAGCTCATAGTGTCAGGGATCGGCTTATT
GAGCGATGGCATGATACTCATCAGTACTTTAAGAAGAAAGATCCTAAGCGAATTTACTTC
CTTTCGCTTGAATTTCTTATGGGTCGTTCTCTAACTAACAGTGTCACAAACCTTGGCATT
CAGGACCAATATGCTGATGCTTTAACTCAGCTTGGATTTGACTATGAAGTCTTGGCAGAG
CAGGAAGGAGATGCTGCCCTTGGTAACGGCGGCCTAGCTCGTTTTGCAGCTTGTCAAATG
GATTCCCTGGCGACATTGGACTATCCAGCTTGGGGTTATGGATTACGCTATCAATATGGA
TTATTTCGTCAGATCATAGTGGATGGTTTTCAACACGAACAGCCTGATTTTTGGTTGAAC
TTTGGGAACCCCTGGGAGATAGAGCGTGTTCATGTATCATATCCAGTGAAGTTCTATGGG
ACTGTTGAAGAGGAAGTTTTAAATGGAAAGAAATGTAAAATTTGGATACCTGGAGAATCA
GTTGAAGCAGTGGCTTATGATAATCCAATACCCGGTTATGGCACGCGAAATGCCATCAAC
CTTCGACTGTGGGCTGCTAAACCAAGTGATCAATATGACATGGAGTCTTATACCACTGGG
GACTATATTAATGCTATTGTTAACAGACAGAAGGCTGAAACTATAAGTAATGTGTTGTAC
CCTGATGACCGTTCTTACCAGGGCAAGGAACTGCGGTTGAAGCAACAATATTTCTTTGTT
TCAGCATCACTACAAGACATAATGAGGAGGTTTAAGGATTTACATAGAAGCTTTGATGAG
TTTCCAGAGAAGGTTGCTCTTCAGATAAATGATACACATCCATCAATTTCCATTGCTGAG
GTAATGAGAGTGCTTGTTGATGAAGAGCACTTGGATTGGAGTAAAGCATGGGATATTGCT
TGCAGGATTTTCTCAGTCACCATTCATGCAGTACAACCTGAAGGGCTTGAGAAAATCCCC
GTGGATCTTTTGGGTAGTGTTCTTCCTCGACATTTAGAGATTATATATGAGATAAACTAT
CGTCTCATGGAAGAGTTAAAGAAGAATTTTGGTCAGGACTATGATAAACTTTCCCGAATG
TCAATTATTGAGGAAGGTGCTGTTAAGACTATTCGGATGGCAAACCTGTCACTTGCATGT
TGCCACACTGTGAATGGTGTTTCCAGAGTGCATCTAGAGACACTTAAAACAAGAGTGTTT
AAGGACTTTTATGAGCTGTGGCCTCAGAAATTTCAGTGCAAGACTAATGGAGTAACCCAG
CGCCGTTGGATAGTGGTGAGCAATCCTAGTTTGTGTTCAATCATTTCAAAATGGCTTGGG
ACAGAAGCATGGATCCGTAATGTTGACCTCATAGCAGGTTTAAGAGAATATGCAAAAGAT
CCTGATTTACACACTGAATGGAAGAATATGAAGAGAGTTAACAAAATGAGGCTCGCTGAG
TACATAGAAACACTTACCAGTGTGAAGGTCAGTTTGGATGCAATGTTCGATGTGCAGATA
AAACGAATACATGAATACAAAAGACAGCTGCTCAACATGTTAGGTATCATCCACAGATAT
GACTGCATTAAGAATATGGATGAAAGTGACAAGCGGAGAGTTGTACCTCGTGTATGTATA
ATTGGTGGGAAAGCTGCCCCTGGTTATGAAGTTGCAAAGAAGATAATCAAACTTTGTCAT
GCGGTGGCTGATAAAGTTAACAACGATCCTGATGTTGGGGATCTCCTGAAAGTGGTTTTC
ATCCCTGATTATAATGTCTCTGTTGCGGAACTAGTAATTCCAGGGAGTGATCTTTCACAG
CACCTAAGTACAGCTGGGCATGAGGCATCTGGAACTGGATGTATGAAATTTTTAATGAAC
GGTTGTTTATTATTAGCAACTGCAGATGGCTCAGCAGTTGAAATTGCTGAAGAAATAGGG
GCAGAAAACATGTTTCTTTTTGGAGCAAAGGTGGATGAGGTTCCAGCATTGAGAGAAAAA
GGAACTACTCTAAAAGGTTCACTTCAATTTGCACGAGTTGTAAGGATGGTGCGGGATGGT
TACTTTGGCTTCAAAGACTACTTCAAGTCACTATGCGACACTGTAGAGGATGGTGGAGAC
TTTTATCTCCTGGGATATGATTTTGCTAGCTATTTAGAGGCTCAGGCTGCTGCTGATAGA
ACATTTGTTGATCAAGAAAAGTGGATCCAAATGAGCATACTGTCTACTGCAGGTTCTGGA
AAATTCAGCAGCGATAGAACCATAGAAGAATACGCACAGCAGAGTTGGGGCATCGAACCC
TGCAAATGCCCCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054992
PEP Infomation

pacid=37424978 transcript=PGSC0003DMT400081273 locus=PGSC0003DMG400031765 ID=PGSC0003DMT400081273.v4.03 annot-version=v4.03
Sequence

MAAISVPLLAVRSPPTNLPFPSIFNLNRPFSTSLSSNAFSHLKVSSSTSSSNQAVTETTS
TSSSTINVQNDDALDTTLFVIRAKNRIGLLQIITRVFKVLGLKIEKAIIEFEGEFFVKKF
YVNDSNGKKIEKMEYLEKIQKALLEAIDGDDGGAGVSAPSAVSGRGVVVRKPGLNMELGG
RKAKVEKMFGLMDEFLKNDSISLQKDILDHVEFTVARSRFSFDDFEAYQALAHSVRDRLI
ERWHDTHQYFKKKDPKRIYFLSLEFLMGRSLTNSVTNLGIQDQYADALTQLGFDYEVLAE
QEGDAALGNGGLARFAACQMDSLATLDYPAWGYGLRYQYGLFRQIIVDGFQHEQPDFWLN
FGNPWEIERVHVSYPVKFYGTVEEEVLNGKKCKIWIPGESVEAVAYDNPIPGYGTRNAIN
LRLWAAKPSDQYDMESYTTGDYINAIVNRQKAETISNVLYPDDRSYQGKELRLKQQYFFV
SASLQDIMRRFKDLHRSFDEFPEKVALQINDTHPSISIAEVMRVLVDEEHLDWSKAWDIA
CRIFSVTIHAVQPEGLEKIPVDLLGSVLPRHLEIIYEINYRLMEELKKNFGQDYDKLSRM
SIIEEGAVKTIRMANLSLACCHTVNGVSRVHLETLKTRVFKDFYELWPQKFQCKTNGVTQ
RRWIVVSNPSLCSIISKWLGTEAWIRNVDLIAGLREYAKDPDLHTEWKNMKRVNKMRLAE
YIETLTSVKVSLDAMFDVQIKRIHEYKRQLLNMLGIIHRYDCIKNMDESDKRRVVPRVCI
IGGKAAPGYEVAKKIIKLCHAVADKVNNDPDVGDLLKVVFIPDYNVSVAELVIPGSDLSQ
HLSTAGHEASGTGCMKFLMNGCLLLATADGSAVEIAEEIGAENMFLFGAKVDEVPALREK
GTTLKGSLQFARVVRMVRDGYFGFKDYFKSLCDTVEDGGDFYLLGYDFASYLEAQAAADR
TFVDQEKWIQMSILSTAGSGKFSSDRTIEEYAQQSWGIEPCKCPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400081273
Transcript Infomation

pacid=37424978 locus=PGSC0003DMG400031765 ID=PGSC0003DMT400081273.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCATTTCAGTTCCTCTCCTGGCCGTCCGATCACCTCCAACAAACCTCCCATTC
CCCTCAATCTTCAATCTTAACCGTCCATTTTCCACTTCACTCTCCTCCAATGCCTTCAGC
CATTTGAAAGTCTCAAGTTCTACTTCTAGTTCTAACCAAGCCGTCACTGAAACAACTTCT
ACCTCTAGCTCTACCATCAATGTCCAAAACGACGACGCTTTAGACACGACCCTTTTCGTT
ATTCGAGCCAAGAACCGAATTGGGCTTCTTCAAATCATTACCCGGGTATTCAAAGTACTC
GGGCTCAAAATTGAGAAGGCTATTATTGAATTCGAAGGTGAGTTTTTCGTGAAGAAGTTT
TACGTCAATGATTCTAATGGTAAGAAGATTGAGAAAATGGAGTATTTGGAGAAGATTCAG
AAGGCATTGTTGGAGGCTATCGACGGCGATGACGGTGGCGCCGGAGTTTCGGCGCCGTCG
GCAGTTAGTGGGAGAGGGGTGGTTGTGAGGAAACCTGGGTTGAATATGGAATTAGGAGGC
AGGAAGGCGAAAGTAGAGAAGATGTTTGGGTTGATGGATGAGTTCTTGAAGAATGATTCA
ATTAGCTTACAGAAGGATATTCTTGATCATGTTGAATTTACTGTAGCTAGGTCAAGGTTC
AGTTTTGATGATTTTGAAGCTTACCAGGCATTAGCTCATAGTGTCAGGGATCGGCTTATT
GAGCGATGGCATGATACTCATCAGTACTTTAAGAAGAAAGATCCTAAGCGAATTTACTTC
CTTTCGCTTGAATTTCTTATGGGTCGTTCTCTAACTAACAGTGTCACAAACCTTGGCATT
CAGGACCAATATGCTGATGCTTTAACTCAGCTTGGATTTGACTATGAAGTCTTGGCAGAG
CAGGAAGGAGATGCTGCCCTTGGTAACGGCGGCCTAGCTCGTTTTGCAGCTTGTCAAATG
GATTCCCTGGCGACATTGGACTATCCAGCTTGGGGTTATGGATTACGCTATCAATATGGA
TTATTTCGTCAGATCATAGTGGATGGTTTTCAACACGAACAGCCTGATTTTTGGTTGAAC
TTTGGGAACCCCTGGGAGATAGAGCGTGTTCATGTATCATATCCAGTGAAGTTCTATGGG
ACTGTTGAAGAGGAAGTTTTAAATGGAAAGAAATGTAAAATTTGGATACCTGGAGAATCA
GTTGAAGCAGTGGCTTATGATAATCCAATACCCGGTTATGGCACGCGAAATGCCATCAAC
CTTCGACTGTGGGCTGCTAAACCAAGTGATCAATATGACATGGAGTCTTATACCACTGGG
GACTATATTAATGCTATTGTTAACAGACAGAAGGCTGAAACTATAAGTAATGTGTTGTAC
CCTGATGACCGTTCTTACCAGGGCAAGGAACTGCGGTTGAAGCAACAATATTTCTTTGTT
TCAGCATCACTACAAGACATAATGAGGAGGTTTAAGGATTTACATAGAAGCTTTGATGAG
TTTCCAGAGAAGGTTGCTCTTCAGATAAATGATACACATCCATCAATTTCCATTGCTGAG
GTAATGAGAGTGCTTGTTGATGAAGAGCACTTGGATTGGAGTAAAGCATGGGATATTGCT
TGCAGGATTTTCTCAGTCACCATTCATGCAGTACAACCTGAAGGGCTTGAGAAAATCCCC
GTGGATCTTTTGGGTAGTGTTCTTCCTCGACATTTAGAGATTATATATGAGATAAACTAT
CGTCTCATGGAAGAGTTAAAGAAGAATTTTGGTCAGGACTATGATAAACTTTCCCGAATG
TCAATTATTGAGGAAGGTGCTGTTAAGACTATTCGGATGGCAAACCTGTCACTTGCATGT
TGCCACACTGTGAATGGTGTTTCCAGAGTGCATCTAGAGACACTTAAAACAAGAGTGTTT
AAGGACTTTTATGAGCTGTGGCCTCAGAAATTTCAGTGCAAGACTAATGGAGTAACCCAG
CGCCGTTGGATAGTGGTGAGCAATCCTAGTTTGTGTTCAATCATTTCAAAATGGCTTGGG
ACAGAAGCATGGATCCGTAATGTTGACCTCATAGCAGGTTTAAGAGAATATGCAAAAGAT
CCTGATTTACACACTGAATGGAAGAATATGAAGAGAGTTAACAAAATGAGGCTCGCTGAG
TACATAGAAACACTTACCAGTGTGAAGGTCAGTTTGGATGCAATGTTCGATGTGCAGATA
AAACGAATACATGAATACAAAAGACAGCTGCTCAACATGTTAGGTATCATCCACAGATAT
GACTGCATTAAGAATATGGATGAAAGTGACAAGCGGAGAGTTGTACCTCGTGTATGTATA
ATTGGTGGGAAAGCTGCCCCTGGTTATGAAGTTGCAAAGAAGATAATCAAACTTTGTCAT
GCGGTGGCTGATAAAGTTAACAACGATCCTGATGTTGGGGATCTCCTGAAAGTGGTTTTC
ATCCCTGATTATAATGTCTCTGTTGCGGAACTAGTAATTCCAGGGAGTGATCTTTCACAG
CACCTAAGTACAGCTGGGCATGAGGCATCTGGAACTGGATGTATGAAATTTTTAATGAAC
GGTTGTTTATTATTAGCAACTGCAGATGGCTCAGCAGTTGAAATTGCTGAAGAAATAGGG
GCAGAAAACATGTTTCTTTTTGGAGCAAAGGTGGATGAGGTTCCAGCATTGAGAGAAAAA
GGAACTACTCTAAAAGGTTCACTTCAATTTGCACGAGTTGTAAGGATGGTGCGGGATGGT
TACTTTGGCTTCAAAGACTACTTCAAGTCACTATGCGACACTGTAGAGGATGGTGGAGAC
TTTTATCTCCTGGGATATGATTTTGCTAGCTATTTAGAGGCTCAGGCTGCTGCTGATAGA
ACATTTGTTGATCAAGAAAAGTGGATCCAAATGAGCATACTGTCTACTGCAGGTTCTGGA
AAATTCAGCAGCGATAGAACCATAGAAGAATACGCACAGCAGAGTTGGGGCATCGAACCC
TGCAAATGCCCCTTCTGA