Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081223
CDS Infomation

pacid=37426336 polypeptide=PGSC0003DMP400054959 locus=PGSC0003DMG400031750 ID=PGSC0003DMT400081223.v4.03 annot-version=v4.03
Sequence

ATGGGTGTAGATTACTATAAGATATTGCAAGTTGATAAGAGTGCTACAGATGATGAACTG
AAGAAAGCTTATAGGAAATTGGCTATGAAATGGCATCCTGATAAGAACCCAAATAACAAG
AAAGAAGCTGAGGCTAAATTCAAACAGATCTCTGAAGCTTATGAGGTTCTGAGTGATTCA
CAGAAAAGGGCAATTTATGATCAGTATGGGGAAGAAGGCCTTAAAGGTCAAGTGCCACCA
CCAGATGCTGCTGCTGGTGGACCTGGTGGGGCTACATATTTCCATACAGGTGATGGTCCA
AATGTGTTTAGATTCAATCCAAGAAATGCCAATGATATCTTTGCAGAATTTTTCGGGTTT
CAAACCCCGTTTGGTGGTGGGATGGGAGGTGGTGGTGGTGGGATGAGAGGTGCAAGGTTT
TCTAGTTCAATGTTTGGGGATGATATCTTCAGTTCATTTGGAGAAGGCAGACCAGCGATA
CGGAAGGCGCCACCGATTGAACGAACAGTCCCTTGTAGTCTAGAAGAACTTTATAATGGG
ACAACCAAGAAGATGAAGATCTCTAGGGAGATTGCTGATGCAAGTGGGAAGACTTTACCA
GTAGAAGAAATTCTGACCATTATAATCAAACCTGGCTGGAAAAAGGGAACTAAGATTACA
TTCACAGAGAAAGGAAACGAAGAGCCAAACGTCCTTCCTGCAGATCTCGTGTTCACAATT
GATCAGAAACCACACAGTGTTTTCACAAGGGACGGGAATGACCTTGTGATCAATCAGAAT
ATCTCACTTGTTGAAGCATTAACAGGCTACACGGCCCATGTAACAACGCTCGATGGAAGA
AAACTGACTATTCCTATCAACAAGGTCATACACCCAAACTATGAAGAGATTGTCCCAAAG
GAAGGAATGCCAATACCCAAAGATCCTTCCAAGAGAGGGAATTTGAGGATCAAGTTTGAT
ATCAAGTTCCCTACAAGGTTAACAGCTGACCAGAAGACTGGAATTAAGAAGTTACTTCCT
TCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054959
PEP Infomation

pacid=37426336 transcript=PGSC0003DMT400081223 locus=PGSC0003DMG400031750 ID=PGSC0003DMT400081223.v4.03 annot-version=v4.03
Sequence

MGVDYYKILQVDKSATDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDS
QKRAIYDQYGEEGLKGQVPPPDAAAGGPGGATYFHTGDGPNVFRFNPRNANDIFAEFFGF
QTPFGGGMGGGGGGMRGARFSSSMFGDDIFSSFGEGRPAIRKAPPIERTVPCSLEELYNG
TTKKMKISREIADASGKTLPVEEILTIIIKPGWKKGTKITFTEKGNEEPNVLPADLVFTI
DQKPHSVFTRDGNDLVINQNISLVEALTGYTAHVTTLDGRKLTIPINKVIHPNYEEIVPK
EGMPIPKDPSKRGNLRIKFDIKFPTRLTADQKTGIKKLLPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400081223
Transcript Infomation

pacid=37426336 locus=PGSC0003DMG400031750 ID=PGSC0003DMT400081223.v4.03 annot-version=v4.03
Sequence

ATGGGTGTAGATTACTATAAGATATTGCAAGTTGATAAGAGTGCTACAGATGATGAACTG
AAGAAAGCTTATAGGAAATTGGCTATGAAATGGCATCCTGATAAGAACCCAAATAACAAG
AAAGAAGCTGAGGCTAAATTCAAACAGATCTCTGAAGCTTATGAGGTTCTGAGTGATTCA
CAGAAAAGGGCAATTTATGATCAGTATGGGGAAGAAGGCCTTAAAGGTCAAGTGCCACCA
CCAGATGCTGCTGCTGGTGGACCTGGTGGGGCTACATATTTCCATACAGGTGATGGTCCA
AATGTGTTTAGATTCAATCCAAGAAATGCCAATGATATCTTTGCAGAATTTTTCGGGTTT
CAAACCCCGTTTGGTGGTGGGATGGGAGGTGGTGGTGGTGGGATGAGAGGTGCAAGGTTT
TCTAGTTCAATGTTTGGGGATGATATCTTCAGTTCATTTGGAGAAGGCAGACCAGCGATA
CGGAAGGCGCCACCGATTGAACGAACAGTCCCTTGTAGTCTAGAAGAACTTTATAATGGG
ACAACCAAGAAGATGAAGATCTCTAGGGAGATTGCTGATGCAAGTGGGAAGACTTTACCA
GTAGAAGAAATTCTGACCATTATAATCAAACCTGGCTGGAAAAAGGGAACTAAGATTACA
TTCACAGAGAAAGGAAACGAAGAGCCAAACGTCCTTCCTGCAGATCTCGTGTTCACAATT
GATCAGAAACCACACAGTGTTTTCACAAGGGACGGGAATGACCTTGTGATCAATCAGAAT
ATCTCACTTGTTGAAGCATTAACAGGCTACACGGCCCATGTAACAACGCTCGATGGAAGA
AAACTGACTATTCCTATCAACAAGGTCATACACCCAAACTATGAAGAGATTGTCCCAAAG
GAAGGAATGCCAATACCCAAAGATCCTTCCAAGAGAGGGAATTTGAGGATCAAGTTTGAT
ATCAAGTTCCCTACAAGGTTAACAGCTGACCAGAAGACTGGAATTAAGAAGTTACTTCCT
TCCTAG