Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081218
CDS Infomation

pacid=37426426 polypeptide=PGSC0003DMP400054955 locus=PGSC0003DMG400031748 ID=PGSC0003DMT400081218.v4.03 annot-version=v4.03
Sequence

ATGGCGTTAAATCCTAGTAGTAGAATGGACCCACAAACGGCTGCTGAAAGAGCCGTCTCT
GTGATCGGGTTAGGTTATGATTTGACAAGTGATATCCGGTTGACAGCATGTAAAATCGGA
CCGAATGGGTCGGGTTTGATAGAGGTTGATCAGAAGTCGACCAAGGACCTGCTGGTGCCT
GGTGGGGTGGTGGTTTCTAATGTTTCCACCTCTATCAAGTGCGATAAAGGGGAACGAACT
AGGTTTCGCTCTGATGCTCTTTCTTTTAGTCAGATGTCAGAACAATTGAATCAGGAGCTG
TCCCTGTCTGGTAAGATACCTTCTGGGTTGTTTAATGCGATGTTTGGTCACAAGGGATGC
TGGCAAAAAGATGCAGCTTCGACAAAGCTTCTCGCTTTTGATGGTTGGTTCATTACCTTG
TACAATATTGAGTTGGTGAGATCCCATCTAACACTATCTGAGCAAGTAAAACAAGACGTT
CCTTCTTCTTGGGATCCTCCTGCACTTGCAGAGTTTATTGAAAAATTTGGCACCCATATT
GTTGTTGGGGTAAAGATGGGAGGTAAAGATGTAATTCACATAAAGCAGCTGCAAAATTCC
ATTCTTCAGCCAATGGAGGTGCAGAAATTACTCAAGCAATTAGCTGATGAAAAATTTTCA
GAAGACGTAAATGGATGCCAGATAGCAAAACCTGTTAGATCTGCTGAAAAATCAAAGGGC
GAAAAATCAATATTCTCAGATCCGCATCTACCATTTGCAAACTCAATGAGACCATCTATT
ATGTCTCACTCGAAAGCTGATGATCTACTAAGTATTCATATCCGCCGAGGAGGTCTTGAT
TTTGGTCAAAGTCATAGTCAGTGGCTTCCTACTGTATCACAGTCTCCCAATGCCATATCA
ATGTCGTTTGTGCCAATCGCTTCACTTTTGAGTGGTGTAAGGGGCAGTGGATTTTTAAGC
CATGCAATTAATCTTTACCTGCGATATAAACCGCCAATCGAGGAACTTGAACAATTTTTA
GAATTTCAGTTACCTCGGCAGTGGGCTCCAGCATATGGTGATCTTCCTCTTGGTCATCGC
CGCAGAAAACAGGCATCTCCATCCTTGCAGTTCACTTTGATGGGTCCAAGGCTATATGTT
AACACTGTAAAGGTCGACTCTGGAAACAGGCCAGTAACTGGAATTCGGTTATACTTGGAA
GGTAAAAGGAGTGATCACCTGGCTATCCATCTTCAACATCTATCAGCACTTCCTCAAAGT
ATCCAACTAACAGATGATCTTAGCTATGAGCCTGTCGATGAACCAGTTGAACGAGGGTAT
CTTGAACCTGTCAAATGGAGCATATTTTCACATGTTTGCACTGCTCCAGTAGAATACCGT
GGAACACGGATCGATGACTCTGCTTCTATTGTGACGAAGGCCTGGTTTGAGGTGAAGGTT
ATTGGAATGAAGAAGGTCCTCTTCCTGAGGCTGGGATTCTCAATGGTCGCCTCAGCGAAG
ATCCGTCGGTCAGAGTGGGAAGGACCAGCAACCACATGTCGAAAATCAGGTTTGATCTCA
ATGCTGATCACCACCCCATTCAGTACAAAGCTAAACCAACCCCAGAAGCCAACAAAGGTG
GACTTGAATTCCGCGGTTTATCCTGGTGGTCCACCTTCACCAGCAAGAGCGCCAAAGATG
TTGCACTTTGTTGATACAACAGAAATGGTAAGAGGTCCCGAGGAGTCACCTGGTTACTGG
GTGGTTACTGGTGTAAAGCTGTGTGTAGAAGATAGTAGGATAAGAATGAAAGTGAAGTAC
TCCCTCTTAACCATACTTACAGAGGAGTCATTGTTGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400054955
PEP Infomation

pacid=37426426 transcript=PGSC0003DMT400081218 locus=PGSC0003DMG400031748 ID=PGSC0003DMT400081218.v4.03 annot-version=v4.03
Sequence

MALNPSSRMDPQTAAERAVSVIGLGYDLTSDIRLTACKIGPNGSGLIEVDQKSTKDLLVP
GGVVVSNVSTSIKCDKGERTRFRSDALSFSQMSEQLNQELSLSGKIPSGLFNAMFGHKGC
WQKDAASTKLLAFDGWFITLYNIELVRSHLTLSEQVKQDVPSSWDPPALAEFIEKFGTHI
VVGVKMGGKDVIHIKQLQNSILQPMEVQKLLKQLADEKFSEDVNGCQIAKPVRSAEKSKG
EKSIFSDPHLPFANSMRPSIMSHSKADDLLSIHIRRGGLDFGQSHSQWLPTVSQSPNAIS
MSFVPIASLLSGVRGSGFLSHAINLYLRYKPPIEELEQFLEFQLPRQWAPAYGDLPLGHR
RRKQASPSLQFTLMGPRLYVNTVKVDSGNRPVTGIRLYLEGKRSDHLAIHLQHLSALPQS
IQLTDDLSYEPVDEPVERGYLEPVKWSIFSHVCTAPVEYRGTRIDDSASIVTKAWFEVKV
IGMKKVLFLRLGFSMVASAKIRRSEWEGPATTCRKSGLISMLITTPFSTKLNQPQKPTKV
DLNSAVYPGGPPSPARAPKMLHFVDTTEMVRGPEESPGYWVVTGVKLCVEDSRIRMKVKY
SLLTILTEESLLI*

Transcript Sequence

Transcript ID

PGSC0003DMT400081218
Transcript Infomation

pacid=37426426 locus=PGSC0003DMG400031748 ID=PGSC0003DMT400081218.v4.03 annot-version=v4.03
Sequence

ATGGCGTTAAATCCTAGTAGTAGAATGGACCCACAAACGGCTGCTGAAAGAGCCGTCTCT
GTGATCGGGTTAGGTTATGATTTGACAAGTGATATCCGGTTGACAGCATGTAAAATCGGA
CCGAATGGGTCGGGTTTGATAGAGGTTGATCAGAAGTCGACCAAGGACCTGCTGGTGCCT
GGTGGGGTGGTGGTTTCTAATGTTTCCACCTCTATCAAGTGCGATAAAGGGGAACGAACT
AGGTTTCGCTCTGATGCTCTTTCTTTTAGTCAGATGTCAGAACAATTGAATCAGGAGCTG
TCCCTGTCTGGTAAGATACCTTCTGGGTTGTTTAATGCGATGTTTGGTCACAAGGGATGC
TGGCAAAAAGATGCAGCTTCGACAAAGCTTCTCGCTTTTGATGGTTGGTTCATTACCTTG
TACAATATTGAGTTGGTGAGATCCCATCTAACACTATCTGAGCAAGTAAAACAAGACGTT
CCTTCTTCTTGGGATCCTCCTGCACTTGCAGAGTTTATTGAAAAATTTGGCACCCATATT
GTTGTTGGGGTAAAGATGGGAGGTAAAGATGTAATTCACATAAAGCAGCTGCAAAATTCC
ATTCTTCAGCCAATGGAGGTGCAGAAATTACTCAAGCAATTAGCTGATGAAAAATTTTCA
GAAGACGTAAATGGATGCCAGATAGCAAAACCTGTTAGATCTGCTGAAAAATCAAAGGGC
GAAAAATCAATATTCTCAGATCCGCATCTACCATTTGCAAACTCAATGAGACCATCTATT
ATGTCTCACTCGAAAGCTGATGATCTACTAAGTATTCATATCCGCCGAGGAGGTCTTGAT
TTTGGTCAAAGTCATAGTCAGTGGCTTCCTACTGTATCACAGTCTCCCAATGCCATATCA
ATGTCGTTTGTGCCAATCGCTTCACTTTTGAGTGGTGTAAGGGGCAGTGGATTTTTAAGC
CATGCAATTAATCTTTACCTGCGATATAAACCGCCAATCGAGGAACTTGAACAATTTTTA
GAATTTCAGTTACCTCGGCAGTGGGCTCCAGCATATGGTGATCTTCCTCTTGGTCATCGC
CGCAGAAAACAGGCATCTCCATCCTTGCAGTTCACTTTGATGGGTCCAAGGCTATATGTT
AACACTGTAAAGGTCGACTCTGGAAACAGGCCAGTAACTGGAATTCGGTTATACTTGGAA
GGTAAAAGGAGTGATCACCTGGCTATCCATCTTCAACATCTATCAGCACTTCCTCAAAGT
ATCCAACTAACAGATGATCTTAGCTATGAGCCTGTCGATGAACCAGTTGAACGAGGGTAT
CTTGAACCTGTCAAATGGAGCATATTTTCACATGTTTGCACTGCTCCAGTAGAATACCGT
GGAACACGGATCGATGACTCTGCTTCTATTGTGACGAAGGCCTGGTTTGAGGTGAAGGTT
ATTGGAATGAAGAAGGTCCTCTTCCTGAGGCTGGGATTCTCAATGGTCGCCTCAGCGAAG
ATCCGTCGGTCAGAGTGGGAAGGACCAGCAACCACATGTCGAAAATCAGGTTTGATCTCA
ATGCTGATCACCACCCCATTCAGTACAAAGCTAAACCAACCCCAGAAGCCAACAAAGGTG
GACTTGAATTCCGCGGTTTATCCTGGTGGTCCACCTTCACCAGCAAGAGCGCCAAAGATG
TTGCACTTTGTTGATACAACAGAAATGGTAAGAGGTCCCGAGGAGTCACCTGGTTACTGG
GTGGTTACTGGTGTAAAGCTGTGTGTAGAAGATAGTAGGATAAGAATGAAAGTGAAGTAC
TCCCTCTTAACCATACTTACAGAGGAGTCATTGTTGATATAA