Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081211
CDS Infomation

pacid=37462956 polypeptide=PGSC0003DMP400054949 locus=PGSC0003DMG402031741 ID=PGSC0003DMT400081211.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTTCTGCAGATCACTGGGCTTTTGTTTTTGGTGTCCTTGGGAACATCGTTTCG
TTCATCGTATTCCTTTCTCCACTGCCAACGTTTTACACAATTTATAAGAAGAAAACCGCT
GAAGGGTACCAATCAATTCCATACGTGGTTGCTCTATTTAGCTCCATGCTATGGATTTAC
TACGCATTTTTGAAGACCAACACAACACTTCTCATCACTATTAACACATTTGGTGTCTTC
ATTGAAACTATCTACGTTGGTTTCTACCTTTTCTACGCACCAAAAAAATCCAGGGTCCAA
ACTATAAAGATGCTCTCTTTATTTGTTGTGGGTGGATTTGGTGCAATAATTTTGGTTACT
GAATTTCTATTCAAAGGAGCCATTCGTGGACAAGTTGTTGGATGGATTTGCCTTATTTTC
TCCTTATGTGTATTTGTTGCACCCTTAGGCATTGTGAGAAAAGTGATCAAAACAAAGAGT
GTGGAATACATGCCATTACTTCTATCAGTTTTTCTCACATTAAGTGCCGTTATGTGGTTC
TTCTATGGTCTTCTATTAAAAGACATTAACATCGCTGCTCCAAATATATTGGGATTCATC
TTTGGTATACTCCAAATGATTCTGTATGTAATATACAGCAAAAAGGAGAAGGCCATTCTA
AAGGAACAGAAACTTCCAGAGATACAAAAGGCTGAAGTCATTGTGAAGGATGAGAACATG
AACACTAATAAGAAGTTTCCAGAACTTACACAAGAACAAATTATTGACATAGTGAGGCTT
GGTTTAATGGTTTGCAAAGATAAAGTACACGTGGCGACGTGTCCACATGGTACTACATGT
GAAGCTAAAGTTGATGAGAATGTGCCCAAGTTGCAAACCATGGAGGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054949
PEP Infomation

pacid=37462956 transcript=PGSC0003DMT400081211 locus=PGSC0003DMG402031741 ID=PGSC0003DMT400081211.v4.03 annot-version=v4.03
Sequence

MAFSADHWAFVFGVLGNIVSFIVFLSPLPTFYTIYKKKTAEGYQSIPYVVALFSSMLWIY
YAFLKTNTTLLITINTFGVFIETIYVGFYLFYAPKKSRVQTIKMLSLFVVGGFGAIILVT
EFLFKGAIRGQVVGWICLIFSLCVFVAPLGIVRKVIKTKSVEYMPLLLSVFLTLSAVMWF
FYGLLLKDINIAAPNILGFIFGILQMILYVIYSKKEKAILKEQKLPEIQKAEVIVKDENM
NTNKKFPELTQEQIIDIVRLGLMVCKDKVHVATCPHGTTCEAKVDENVPKLQTMEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400081211
Transcript Infomation

pacid=37462956 locus=PGSC0003DMG402031741 ID=PGSC0003DMT400081211.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTTCTGCAGATCACTGGGCTTTTGTTTTTGGTGTCCTTGGGAACATCGTTTCG
TTCATCGTATTCCTTTCTCCACTGCCAACGTTTTACACAATTTATAAGAAGAAAACCGCT
GAAGGGTACCAATCAATTCCATACGTGGTTGCTCTATTTAGCTCCATGCTATGGATTTAC
TACGCATTTTTGAAGACCAACACAACACTTCTCATCACTATTAACACATTTGGTGTCTTC
ATTGAAACTATCTACGTTGGTTTCTACCTTTTCTACGCACCAAAAAAATCCAGGGTCCAA
ACTATAAAGATGCTCTCTTTATTTGTTGTGGGTGGATTTGGTGCAATAATTTTGGTTACT
GAATTTCTATTCAAAGGAGCCATTCGTGGACAAGTTGTTGGATGGATTTGCCTTATTTTC
TCCTTATGTGTATTTGTTGCACCCTTAGGCATTGTGAGAAAAGTGATCAAAACAAAGAGT
GTGGAATACATGCCATTACTTCTATCAGTTTTTCTCACATTAAGTGCCGTTATGTGGTTC
TTCTATGGTCTTCTATTAAAAGACATTAACATCGCTGCTCCAAATATATTGGGATTCATC
TTTGGTATACTCCAAATGATTCTGTATGTAATATACAGCAAAAAGGAGAAGGCCATTCTA
AAGGAACAGAAACTTCCAGAGATACAAAAGGCTGAAGTCATTGTGAAGGATGAGAACATG
AACACTAATAAGAAGTTTCCAGAACTTACACAAGAACAAATTATTGACATAGTGAGGCTT
GGTTTAATGGTTTGCAAAGATAAAGTACACGTGGCGACGTGTCCACATGGTACTACATGT
GAAGCTAAAGTTGATGAGAATGTGCCCAAGTTGCAAACCATGGAGGTTTAG