Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400081181
CDS Infomation

pacid=37459785 polypeptide=PGSC0003DMP400054925 locus=PGSC0003DMG400031730 ID=PGSC0003DMT400081181.v4.03 annot-version=v4.03
Sequence

ATGGCGTCCGAGAAAGAAACCCTAGATTACAAGAAACCAGAGGGGGTGATTGAGGAGCAA
CAAGCAAAGGCCAAGGAAAAGGAAAAGAAAGAGGAATCTTCCATACAAGGACAAGAAGTA
GAGGAAGTAGACGAAATGCAAGTTGACAAAAAAGATGCAGAATCAGAGGAGGAGGAGGAA
AAAGAAGAAGAAAAACCAGTCAAGAAGGGGAAAAGCAGAGGTGAGAGTACGGAAGAGCCT
GTGACACCAATCACAAGACCAACTAGGGAAAGGAAAACTGTGGAGCGCTATTCTGAGTCT
TCGGATGCTAGAGGTTCCACGCCTAAGCCATTGTCAATTAGGAAGGGTAGTGGTACTCAG
CTGAAGGATATACCAAATGTGGCTTATAAACTATCCAAGAGAAAACCCGATGACAACCTT
CAAATACTTCACAACATCCTTTTTGGCAAGAAATCAAAGGTACATAGTTTGAAGAAAAAC
ATAGGACAATTTTCAGGATTTGTTTGGGTTGAAAATGAGGAAAAAGAAAGGCGAAAAACC
AAAGAGAAGTTGGACAAGTGTGTTAAGGAAAAGCTGCTGGATTTTTGTGATGTCCTCAAT
ATTCCAGTGAGCAGAACTTCTGCAAAGAAGGATGAGCTCTCAGTGAAATTATTAGAATTC
CTGGAATCTCCTCATTCTACAACAGATTCCTTGCTTGCTGAGAAGGAACAGAAGGGTAAG
AAGCAAAAGAGAAAGAGCTCAGCTAGCAAAAGCGCAGGTTCCTTGGATAAGTCAGTTAAG
AAGCATCAGAAATCTGAAGTTGGGGTAAAACGCAAGCGGTCAGCAAAAACTGAGGAAGAA
GAAGCTGATGATGAACAACCATCAGATAGTGGTGATGACTCTGAGAATGATGATGAAGCT
CCTAAAGAAGGAAGTGATCAGGAAGAGAGTGGTTCTGAGAAAGGTGAGAAACAAGAGGAA
GAGGAAGTGGAAGAGGAGGTGGAAGAGAAACCAAAGAAAAACAAGTCTAATGAGAAAATT
AATTCGAAGAAGAATGTGAAGAAGGATTCGGGGAGTAAAGCAGCAGAGAAGACTAAGGCC
ACAGAAAAGGGCAGCTCTGCTAAGTCCTTGAAAAGTTCATCAAAGTCTACCCCTTCAAGT
TCAGTTTCCAAGAAAGGTGCTTCTGCTGCTGATTCAACATCTAAAGCCAAGAAAGAAAAG
GCTGAAAAGAAAAGTAAAAAAGAAGAAACTGAATCTGTGAAGGAAAATTCTTCAAGCAAG
AAACAATCAAGCAAGTCTACTTCAAAGGTTTCTGAAAAAGGAAAAGGGAAAAGTGTAAAG
AAGGCCAAGGCAGAGCCCAGCAAAGAAGAATTGCATGCAGTAGTATCAATTATTCTGAAA
AAAGTGGATTTTAACACTGCAACTTTATCTGATATTATCAGGCAACTAGGTAGCCACTTT
GATCTGGATTTGATGCACAGAAAAGCAGAGGTAAAAGCTATAATCACTGAAGTTATAAAT
AGCATGAGTGAAGAGGAAGAAGATGAGGATGAACCTGAGGGTGATGATGCAGAAACATCT
GAAGGAGATGCTGATGCAGAAAAGCCCGAAGGTGATGATGATGCAGAAAAGTCTGATGGT
GCTGACAGTGATGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054925
PEP Infomation

pacid=37459785 transcript=PGSC0003DMT400081181 locus=PGSC0003DMG400031730 ID=PGSC0003DMT400081181.v4.03 annot-version=v4.03
Sequence

MASEKETLDYKKPEGVIEEQQAKAKEKEKKEESSIQGQEVEEVDEMQVDKKDAESEEEEE
KEEEKPVKKGKSRGESTEEPVTPITRPTRERKTVERYSESSDARGSTPKPLSIRKGSGTQ
LKDIPNVAYKLSKRKPDDNLQILHNILFGKKSKVHSLKKNIGQFSGFVWVENEEKERRKT
KEKLDKCVKEKLLDFCDVLNIPVSRTSAKKDELSVKLLEFLESPHSTTDSLLAEKEQKGK
KQKRKSSASKSAGSLDKSVKKHQKSEVGVKRKRSAKTEEEEADDEQPSDSGDDSENDDEA
PKEGSDQEESGSEKGEKQEEEEVEEEVEEKPKKNKSNEKINSKKNVKKDSGSKAAEKTKA
TEKGSSAKSLKSSSKSTPSSSVSKKGASAADSTSKAKKEKAEKKSKKEETESVKENSSSK
KQSSKSTSKVSEKGKGKSVKKAKAEPSKEELHAVVSIILKKVDFNTATLSDIIRQLGSHF
DLDLMHRKAEVKAIITEVINSMSEEEEDEDEPEGDDAETSEGDADAEKPEGDDDAEKSDG
ADSDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400081181
Transcript Infomation

pacid=37459785 locus=PGSC0003DMG400031730 ID=PGSC0003DMT400081181.v4.03 annot-version=v4.03
Sequence

ATGGCGTCCGAGAAAGAAACCCTAGATTACAAGAAACCAGAGGGGGTGATTGAGGAGCAA
CAAGCAAAGGCCAAGGAAAAGGAAAAGAAAGAGGAATCTTCCATACAAGGACAAGAAGTA
GAGGAAGTAGACGAAATGCAAGTTGACAAAAAAGATGCAGAATCAGAGGAGGAGGAGGAA
AAAGAAGAAGAAAAACCAGTCAAGAAGGGGAAAAGCAGAGGTGAGAGTACGGAAGAGCCT
GTGACACCAATCACAAGACCAACTAGGGAAAGGAAAACTGTGGAGCGCTATTCTGAGTCT
TCGGATGCTAGAGGTTCCACGCCTAAGCCATTGTCAATTAGGAAGGGTAGTGGTACTCAG
CTGAAGGATATACCAAATGTGGCTTATAAACTATCCAAGAGAAAACCCGATGACAACCTT
CAAATACTTCACAACATCCTTTTTGGCAAGAAATCAAAGGTACATAGTTTGAAGAAAAAC
ATAGGACAATTTTCAGGATTTGTTTGGGTTGAAAATGAGGAAAAAGAAAGGCGAAAAACC
AAAGAGAAGTTGGACAAGTGTGTTAAGGAAAAGCTGCTGGATTTTTGTGATGTCCTCAAT
ATTCCAGTGAGCAGAACTTCTGCAAAGAAGGATGAGCTCTCAGTGAAATTATTAGAATTC
CTGGAATCTCCTCATTCTACAACAGATTCCTTGCTTGCTGAGAAGGAACAGAAGGGTAAG
AAGCAAAAGAGAAAGAGCTCAGCTAGCAAAAGCGCAGGTTCCTTGGATAAGTCAGTTAAG
AAGCATCAGAAATCTGAAGTTGGGGTAAAACGCAAGCGGTCAGCAAAAACTGAGGAAGAA
GAAGCTGATGATGAACAACCATCAGATAGTGGTGATGACTCTGAGAATGATGATGAAGCT
CCTAAAGAAGGAAGTGATCAGGAAGAGAGTGGTTCTGAGAAAGGTGAGAAACAAGAGGAA
GAGGAAGTGGAAGAGGAGGTGGAAGAGAAACCAAAGAAAAACAAGTCTAATGAGAAAATT
AATTCGAAGAAGAATGTGAAGAAGGATTCGGGGAGTAAAGCAGCAGAGAAGACTAAGGCC
ACAGAAAAGGGCAGCTCTGCTAAGTCCTTGAAAAGTTCATCAAAGTCTACCCCTTCAAGT
TCAGTTTCCAAGAAAGGTGCTTCTGCTGCTGATTCAACATCTAAAGCCAAGAAAGAAAAG
GCTGAAAAGAAAAGTAAAAAAGAAGAAACTGAATCTGTGAAGGAAAATTCTTCAAGCAAG
AAACAATCAAGCAAGTCTACTTCAAAGGTTTCTGAAAAAGGAAAAGGGAAAAGTGTAAAG
AAGGCCAAGGCAGAGCCCAGCAAAGAAGAATTGCATGCAGTAGTATCAATTATTCTGAAA
AAAGTGGATTTTAACACTGCAACTTTATCTGATATTATCAGGCAACTAGGTAGCCACTTT
GATCTGGATTTGATGCACAGAAAAGCAGAGGTAAAAGCTATAATCACTGAAGTTATAAAT
AGCATGAGTGAAGAGGAAGAAGATGAGGATGAACCTGAGGGTGATGATGCAGAAACATCT
GAAGGAGATGCTGATGCAGAAAAGCCCGAAGGTGATGATGATGCAGAAAAGTCTGATGGT
GCTGACAGTGATGCTTGA