Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080958
CDS Infomation

pacid=37455959 polypeptide=PGSC0003DMP400054883 locus=PGSC0003DMG402031533 ID=PGSC0003DMT400080958.v4.03 annot-version=v4.03
Sequence

ATGGCGACTGAAATGGCACAAACAGACCCAGAAGGCATCGATGGAGTTCGTATGACATGG
AATTCTTGGCCAAGAACCAAAGTTGAAGCAAGCAAATGTATAATCCCAATTGCTTCTTCA
ATTCAATTGCTTCGTCCTTTCCCTGATCTACCTACCCTACCTTACGCTCCCCTTCGTTGC
AAAACTTGTTCATCAATCTTAAACCCCTTTTGTCGTGTTGATTTTCAAGCTTTAATTTGG
ATCTGTCCGTTTTGTTTCCAACGTAATCATTTCCCTCAGCATTATTCGGGAATTTCGGAA
ACGAATGTACCTGCTGAGCTTTATCCGCAATTTACTACTATTCAGTATGCGATTCAGAAC
CCTGGTGGTCATAATTCTCCACCTGTGTATTTGTTTGTGTTGGATACTTGTATGTTGGAT
GAAGAATTGGAGTTTGCTAAATCTGCATTGAAAAGGGTTATTGGACTTTTGCCTGATTAT
GCTATGGTTGGGTTTATTTCGTATGGTACACAGGTGCAGGTACATGAACTTGGGTTTTCG
GATATGTTGAAGGTTTTTGTGTTTCAGGGTTCGAAGGACTTGTCGAAAGATCAAGTTTTG
GATCAGTTAGGACTTGGTAGTATTAGTGGTAGGAAGGGTGGTGGTGTTGGGGTGAATGGT
GGACCTAATCACGGGTTGACTAGGTTCTTGTTACCTGCTTCTGAGTGTGAGTATACACTC
GATTCGTTGCTAGATGAATTGAATACGGATCAATGGCCTGTGACACCGGGAAACAGAGCA
TCACGCTGCACTGGGGTGGCATTGAGTGTGGCAACTGGTCTGCTTGGTGCTTGTTTGGCT
GGGGCAGGTGCTCGAATTGTTGCATTAGTTGGGGGTCCTTGCACTGAAGGACCTGGCGCG
ATTGTGTCGAAGGATTTATCAGAACCTGTTCGTTCTCATAAAGATCTACACAAGGATGCT
GCACCATTTTTTAGAAAGGCCGTTCATTTCTACGAGGAACTCGCAAAGCAACTCGTTAGT
CACGGTCACATCTTAGATGTTTTTGCTTCAGCACTTGACCAGGTTGGAGTTGCAGAGATG
AAAGTAGCTATTGAAAAGACTGGAGGACAAGTTGTTCTTGCTGAAAGCTTTGGGCATTCT
GTTTTCAAAGATTCCTTCAAGCGTGTATTTGAAGTTGGTGAACAGTCTCTTGGGCTTTGC
TTCAATGCTACATTAGAGATCAACTGCTCCAAGGATATTAAAATTCAAGGGATAATTGGT
CCTTGCACATCTCTTGAGAAGAAAGGACCTGCCGTCTCCAGCACAGTTACTGGTGAGGGG
AATACTACAGCTTGGAAGCTCTGTGGTCTCGACAAAAACACTTGCTTGACAGTTTTCTAT
GATGTTTCATCTAGTGAGAAGTCAGATCCTTCAGGCAATATAAATCCACAATTGTACATA
CAGTTTCTTACAAGTTATCAGAGCCCTGATGGGCAAACAAAACTACGAGTTACAACCATT
ACTAGGAGATGGGTTGATGCTGGTGTTGGCACTGAGGACTTGGTGCAAGGGTTTGATCAG
GAAGCTGCTGCCGTAGTAATGGCTAGATTGGCTTCTTATAAAATGGAGCTAGAGGAAGAT
TTTGATCCCACAAGGTGGCTAGATCGGAATCTGATTCGCCTGTGTTCAAAGTTTGGCGAA
TATAGGAAGGATGATCCTGCATCTTTCACTTTGAATCCCTGTTTTTCTCTGCTCCCTCAG
TTCATGTTTCATTTGCGGCGATCACAATTTTTGCAAGTTTTCAATAATAGTCCCGATGAG
ACAGCATATTTCCGGATGCTGCTCTACCGAGAGAGTATAAGCAATGCTGTTGTTATGATT
CAACCTACACTAATGGCATTTTCATTCAATACGCTGCCTTCTCCAGCTTTACTGGATGTG
GCATCAATTGCTGCTGATCGCATTCTTTTGTTGGATTCGTACTTCAGTGTTGTCATATTC
CATGGAATGACAATAGCTCAATGGAGAAATTTGGGATACCAGAACCAGCCAGAGCATCAG
GCATTTGCGCATCTATTGCAAGTTCCTCATGACGAGGCCCAAGCACTCATCCAGGAGAGG
TTTCCTGTTCCTAGACTTGTAGTGTGTGATCAGCATGGTTCCCAGGCAAGATTTCTTTTG
GCAAAGTTGAATCCCTCAGCCACATACAATAATGCAAACGATATGGCAGCAGGTTCAGAT
GTGATATTCACTGATGATGTAAGTCTCCAAGTTTTCTTCCAGCATCTTCAGCGACTGGCG
GTGCAATCTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054883
PEP Infomation

pacid=37455959 transcript=PGSC0003DMT400080958 locus=PGSC0003DMG402031533 ID=PGSC0003DMT400080958.v4.03 annot-version=v4.03
Sequence

MATEMAQTDPEGIDGVRMTWNSWPRTKVEASKCIIPIASSIQLLRPFPDLPTLPYAPLRC
KTCSSILNPFCRVDFQALIWICPFCFQRNHFPQHYSGISETNVPAELYPQFTTIQYAIQN
PGGHNSPPVYLFVLDTCMLDEELEFAKSALKRVIGLLPDYAMVGFISYGTQVQVHELGFS
DMLKVFVFQGSKDLSKDQVLDQLGLGSISGRKGGGVGVNGGPNHGLTRFLLPASECEYTL
DSLLDELNTDQWPVTPGNRASRCTGVALSVATGLLGACLAGAGARIVALVGGPCTEGPGA
IVSKDLSEPVRSHKDLHKDAAPFFRKAVHFYEELAKQLVSHGHILDVFASALDQVGVAEM
KVAIEKTGGQVVLAESFGHSVFKDSFKRVFEVGEQSLGLCFNATLEINCSKDIKIQGIIG
PCTSLEKKGPAVSSTVTGEGNTTAWKLCGLDKNTCLTVFYDVSSSEKSDPSGNINPQLYI
QFLTSYQSPDGQTKLRVTTITRRWVDAGVGTEDLVQGFDQEAAAVVMARLASYKMELEED
FDPTRWLDRNLIRLCSKFGEYRKDDPASFTLNPCFSLLPQFMFHLRRSQFLQVFNNSPDE
TAYFRMLLYRESISNAVVMIQPTLMAFSFNTLPSPALLDVASIAADRILLLDSYFSVVIF
HGMTIAQWRNLGYQNQPEHQAFAHLLQVPHDEAQALIQERFPVPRLVVCDQHGSQARFLL
AKLNPSATYNNANDMAAGSDVIFTDDVSLQVFFQHLQRLAVQSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400080958
Transcript Infomation

pacid=37455959 locus=PGSC0003DMG402031533 ID=PGSC0003DMT400080958.v4.03 annot-version=v4.03
Sequence

ATGGCGACTGAAATGGCACAAACAGACCCAGAAGGCATCGATGGAGTTCGTATGACATGG
AATTCTTGGCCAAGAACCAAAGTTGAAGCAAGCAAATGTATAATCCCAATTGCTTCTTCA
ATTCAATTGCTTCGTCCTTTCCCTGATCTACCTACCCTACCTTACGCTCCCCTTCGTTGC
AAAACTTGTTCATCAATCTTAAACCCCTTTTGTCGTGTTGATTTTCAAGCTTTAATTTGG
ATCTGTCCGTTTTGTTTCCAACGTAATCATTTCCCTCAGCATTATTCGGGAATTTCGGAA
ACGAATGTACCTGCTGAGCTTTATCCGCAATTTACTACTATTCAGTATGCGATTCAGAAC
CCTGGTGGTCATAATTCTCCACCTGTGTATTTGTTTGTGTTGGATACTTGTATGTTGGAT
GAAGAATTGGAGTTTGCTAAATCTGCATTGAAAAGGGTTATTGGACTTTTGCCTGATTAT
GCTATGGTTGGGTTTATTTCGTATGGTACACAGGTGCAGGTACATGAACTTGGGTTTTCG
GATATGTTGAAGGTTTTTGTGTTTCAGGGTTCGAAGGACTTGTCGAAAGATCAAGTTTTG
GATCAGTTAGGACTTGGTAGTATTAGTGGTAGGAAGGGTGGTGGTGTTGGGGTGAATGGT
GGACCTAATCACGGGTTGACTAGGTTCTTGTTACCTGCTTCTGAGTGTGAGTATACACTC
GATTCGTTGCTAGATGAATTGAATACGGATCAATGGCCTGTGACACCGGGAAACAGAGCA
TCACGCTGCACTGGGGTGGCATTGAGTGTGGCAACTGGTCTGCTTGGTGCTTGTTTGGCT
GGGGCAGGTGCTCGAATTGTTGCATTAGTTGGGGGTCCTTGCACTGAAGGACCTGGCGCG
ATTGTGTCGAAGGATTTATCAGAACCTGTTCGTTCTCATAAAGATCTACACAAGGATGCT
GCACCATTTTTTAGAAAGGCCGTTCATTTCTACGAGGAACTCGCAAAGCAACTCGTTAGT
CACGGTCACATCTTAGATGTTTTTGCTTCAGCACTTGACCAGGTTGGAGTTGCAGAGATG
AAAGTAGCTATTGAAAAGACTGGAGGACAAGTTGTTCTTGCTGAAAGCTTTGGGCATTCT
GTTTTCAAAGATTCCTTCAAGCGTGTATTTGAAGTTGGTGAACAGTCTCTTGGGCTTTGC
TTCAATGCTACATTAGAGATCAACTGCTCCAAGGATATTAAAATTCAAGGGATAATTGGT
CCTTGCACATCTCTTGAGAAGAAAGGACCTGCCGTCTCCAGCACAGTTACTGGTGAGGGG
AATACTACAGCTTGGAAGCTCTGTGGTCTCGACAAAAACACTTGCTTGACAGTTTTCTAT
GATGTTTCATCTAGTGAGAAGTCAGATCCTTCAGGCAATATAAATCCACAATTGTACATA
CAGTTTCTTACAAGTTATCAGAGCCCTGATGGGCAAACAAAACTACGAGTTACAACCATT
ACTAGGAGATGGGTTGATGCTGGTGTTGGCACTGAGGACTTGGTGCAAGGGTTTGATCAG
GAAGCTGCTGCCGTAGTAATGGCTAGATTGGCTTCTTATAAAATGGAGCTAGAGGAAGAT
TTTGATCCCACAAGGTGGCTAGATCGGAATCTGATTCGCCTGTGTTCAAAGTTTGGCGAA
TATAGGAAGGATGATCCTGCATCTTTCACTTTGAATCCCTGTTTTTCTCTGCTCCCTCAG
TTCATGTTTCATTTGCGGCGATCACAATTTTTGCAAGTTTTCAATAATAGTCCCGATGAG
ACAGCATATTTCCGGATGCTGCTCTACCGAGAGAGTATAAGCAATGCTGTTGTTATGATT
CAACCTACACTAATGGCATTTTCATTCAATACGCTGCCTTCTCCAGCTTTACTGGATGTG
GCATCAATTGCTGCTGATCGCATTCTTTTGTTGGATTCGTACTTCAGTGTTGTCATATTC
CATGGAATGACAATAGCTCAATGGAGAAATTTGGGATACCAGAACCAGCCAGAGCATCAG
GCATTTGCGCATCTATTGCAAGTTCCTCATGACGAGGCCCAAGCACTCATCCAGGAGAGG
TTTCCTGTTCCTAGACTTGTAGTGTGTGATCAGCATGGTTCCCAGGCAAGATTTCTTTTG
GCAAAGTTGAATCCCTCAGCCACATACAATAATGCAAACGATATGGCAGCAGGTTCAGAT
GTGATATTCACTGATGATGTAAGTCTCCAAGTTTTCTTCCAGCATCTTCAGCGACTGGCG
GTGCAATCTTCTTGA