Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080935
CDS Infomation

pacid=37457557 polypeptide=PGSC0003DMP400054863 locus=PGSC0003DMG400031522 ID=PGSC0003DMT400080935.v4.03 annot-version=v4.03
Sequence

ATGGATGAGGATTTTGAGTTTCCAGTATCTTCTTCTAACAATGCTGCTGCTGAAGAAATG
GATATAGATATGGGGATGGGGATGGATGATTTCTCTGAACCTGACCCGATTATGAAGGTT
GATGAAGAGAAGGAGATAGGGAAAACTGGGATAAAGAAGAAGCTTTTGAAAGAAGGTGAA
GGTTGGGAGCATCCTAGTAAAGGAGATGAAGTTGAAGTTCATTATGTGGGTACATTGCTG
GATGGAACTCAATTTGATTCAAGTCGTGACCGTGGCACCCCGTTCAAGTTTAAGCTTGGC
GAAGGACAAGTGATTAAAGGGTGGGATGAAGGTATAAAGACAATGAAAAAAGGGGAGAAA
GCTTTGCTCACTATACCTCCAGATATGGCATATGGTGAATCTGGATCCCCTCCAACTATA
CCTCCAAATGCGACTTTACAGTTTGAAGTGGAATTGCTTTCTTGGATTAGTGTCAAAGAC
ATATGCAAGGATGGTGGAATATTCAAGAAGATACTTGTCGAAGGAGAGGGATGGCAGAAT
CCGAAAAATCTTGATGAAGTGTTTGTTAAATACGAGGCACGCCTCGAGGATGGAACGGTT
GTGTCAAAATCCGATGGAGTGGAATTCACTGTGCAAGATGGCTATTTCTGTCCTGCTTTG
TCGAAAGCTGTTAAGACAATGAAGAAAGGAGAGAAAGTCTTACTGACAGTGCAGCCACAA
TATGCATTTGGAGAGACAGGTAAGGTGGCAAGCAGAGACGAAGGTGGTGTCCCACCAAAT
GCCACCCTTCAAATAAATCTTGAATTGATTTCTTGGAAGATTGTCTCTGAAGTAACAAAT
GACAAGAAGGTTCTGAAGAGAATTTTGAAGGAAGGAGAGGGCTATGAGCACCCAAATGAC
GGTGCTCTTGTAAAAGTGAAATTAATCGGAAAACTTCAGGATGGAACTGTTTTTGTGAAG
AAAGGACATGATGAGGAGGAGCCGTTTGAGTTTAAGATAGATGAAGAAAAAGTAGTCGAT
GGACTAGATAAAGCGGTGAAAAAAATGAAGAAGGGTGAAATTGCTCTGATAACAATGCAA
CCAGAGTATGCATTTGGTGCATTCGACTCTCCTCAAGAATTAGCTGTTGTTCCTGGCAAT
TCGATCGTGTATTATGAAGTTGAGTTGGTGTCATTTGTGAAGGAGAAGGAATCCTGGGAT
ATGAATACTCAGGAAAAAATTGAAGCTGCAGGAAAGAAAAAGGAGGAAGGAAATGTATTG
TTCAAGGCTGGGAAGTATGTGAGAGCATCAAAGAGATACGAAAAGGCTGTGAGCTTCATC
GAATATGACTCCTCGTTCAGTGATGACGAGAAGCAGCAGGTAAAACTGCTCAAAGTTAGT
TGCAATCTGAACAATGCCGCGTGCAAGCTGAAACTGAAGGAATACAAAGAAGCAGCAAAA
CTCTGTTCTGAAGTCTTAGAGATTGACAGTAAAAATGTCAAAGCTCTATACAGAAGGGCT
CAAGCTTACATACAACTCGTTGATTTGGACTTAGCAGAACTTGATATCAAGAAAGCACTT
GAAATCGATCCAGATAACAGGGATGTCAAGTTAGAATACAAAGTTTTGAAAGAAAAGATA
AAGGAGTACAACAAGAAGGATGCTCAATTTTATGGCAACATTTTTGCAAAGATGAACAAA
TTAGAGCAAAGTGGAGAAGCAAAAAATGAGGCAGCACCAATGGCTATAGATAGTAAGGCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400054863
PEP Infomation

pacid=37457557 transcript=PGSC0003DMT400080935 locus=PGSC0003DMG400031522 ID=PGSC0003DMT400080935.v4.03 annot-version=v4.03
Sequence

MDEDFEFPVSSSNNAAAEEMDIDMGMGMDDFSEPDPIMKVDEEKEIGKTGIKKKLLKEGE
GWEHPSKGDEVEVHYVGTLLDGTQFDSSRDRGTPFKFKLGEGQVIKGWDEGIKTMKKGEK
ALLTIPPDMAYGESGSPPTIPPNATLQFEVELLSWISVKDICKDGGIFKKILVEGEGWQN
PKNLDEVFVKYEARLEDGTVVSKSDGVEFTVQDGYFCPALSKAVKTMKKGEKVLLTVQPQ
YAFGETGKVASRDEGGVPPNATLQINLELISWKIVSEVTNDKKVLKRILKEGEGYEHPND
GALVKVKLIGKLQDGTVFVKKGHDEEEPFEFKIDEEKVVDGLDKAVKKMKKGEIALITMQ
PEYAFGAFDSPQELAVVPGNSIVYYEVELVSFVKEKESWDMNTQEKIEAAGKKKEEGNVL
FKAGKYVRASKRYEKAVSFIEYDSSFSDDEKQQVKLLKVSCNLNNAACKLKLKEYKEAAK
LCSEVLEIDSKNVKALYRRAQAYIQLVDLDLAELDIKKALEIDPDNRDVKLEYKVLKEKI
KEYNKKDAQFYGNIFAKMNKLEQSGEAKNEAAPMAIDSKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400080935
Transcript Infomation

pacid=37457557 locus=PGSC0003DMG400031522 ID=PGSC0003DMT400080935.v4.03 annot-version=v4.03
Sequence

ATGGATGAGGATTTTGAGTTTCCAGTATCTTCTTCTAACAATGCTGCTGCTGAAGAAATG
GATATAGATATGGGGATGGGGATGGATGATTTCTCTGAACCTGACCCGATTATGAAGGTT
GATGAAGAGAAGGAGATAGGGAAAACTGGGATAAAGAAGAAGCTTTTGAAAGAAGGTGAA
GGTTGGGAGCATCCTAGTAAAGGAGATGAAGTTGAAGTTCATTATGTGGGTACATTGCTG
GATGGAACTCAATTTGATTCAAGTCGTGACCGTGGCACCCCGTTCAAGTTTAAGCTTGGC
GAAGGACAAGTGATTAAAGGGTGGGATGAAGGTATAAAGACAATGAAAAAAGGGGAGAAA
GCTTTGCTCACTATACCTCCAGATATGGCATATGGTGAATCTGGATCCCCTCCAACTATA
CCTCCAAATGCGACTTTACAGTTTGAAGTGGAATTGCTTTCTTGGATTAGTGTCAAAGAC
ATATGCAAGGATGGTGGAATATTCAAGAAGATACTTGTCGAAGGAGAGGGATGGCAGAAT
CCGAAAAATCTTGATGAAGTGTTTGTTAAATACGAGGCACGCCTCGAGGATGGAACGGTT
GTGTCAAAATCCGATGGAGTGGAATTCACTGTGCAAGATGGCTATTTCTGTCCTGCTTTG
TCGAAAGCTGTTAAGACAATGAAGAAAGGAGAGAAAGTCTTACTGACAGTGCAGCCACAA
TATGCATTTGGAGAGACAGGTAAGGTGGCAAGCAGAGACGAAGGTGGTGTCCCACCAAAT
GCCACCCTTCAAATAAATCTTGAATTGATTTCTTGGAAGATTGTCTCTGAAGTAACAAAT
GACAAGAAGGTTCTGAAGAGAATTTTGAAGGAAGGAGAGGGCTATGAGCACCCAAATGAC
GGTGCTCTTGTAAAAGTGAAATTAATCGGAAAACTTCAGGATGGAACTGTTTTTGTGAAG
AAAGGACATGATGAGGAGGAGCCGTTTGAGTTTAAGATAGATGAAGAAAAAGTAGTCGAT
GGACTAGATAAAGCGGTGAAAAAAATGAAGAAGGGTGAAATTGCTCTGATAACAATGCAA
CCAGAGTATGCATTTGGTGCATTCGACTCTCCTCAAGAATTAGCTGTTGTTCCTGGCAAT
TCGATCGTGTATTATGAAGTTGAGTTGGTGTCATTTGTGAAGGAGAAGGAATCCTGGGAT
ATGAATACTCAGGAAAAAATTGAAGCTGCAGGAAAGAAAAAGGAGGAAGGAAATGTATTG
TTCAAGGCTGGGAAGTATGTGAGAGCATCAAAGAGATACGAAAAGGCTGTGAGCTTCATC
GAATATGACTCCTCGTTCAGTGATGACGAGAAGCAGCAGGTAAAACTGCTCAAAGTTAGT
TGCAATCTGAACAATGCCGCGTGCAAGCTGAAACTGAAGGAATACAAAGAAGCAGCAAAA
CTCTGTTCTGAAGTCTTAGAGATTGACAGTAAAAATGTCAAAGCTCTATACAGAAGGGCT
CAAGCTTACATACAACTCGTTGATTTGGACTTAGCAGAACTTGATATCAAGAAAGCACTT
GAAATCGATCCAGATAACAGGGATGTCAAGTTAGAATACAAAGTTTTGAAAGAAAAGATA
AAGGAGTACAACAAGAAGGATGCTCAATTTTATGGCAACATTTTTGCAAAGATGAACAAA
TTAGAGCAAAGTGGAGAAGCAAAAAATGAGGCAGCACCAATGGCTATAGATAGTAAGGCT
TAA