Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080928
CDS Infomation

pacid=37455082 polypeptide=PGSC0003DMP400054857 locus=PGSC0003DMG402031520 ID=PGSC0003DMT400080928.v4.03 annot-version=v4.03
Sequence

ATGATGCTCTTTCTACTCTTTGTAGCCTTTCCTATCCTTCTTATTTTTCTTCTTCCTAAA
GCCAAAAGGATTGGCAAAAACAATCTGCCACCAGGTCCTAAAGGCCTCCCATTCATTGGA
AATTTTCATCAATTTGATAGTTTAGCCCCTCATATCTATTTTTGGAAACTTTCCAAAAAA
TATGGAAAAATATTTTCATTAAAATTTGGTTCTACTCCAATAATTGTGATTTCTTCAGCA
AAATTAGCAAAAGAAGTGTTGAAGACACAAGATTTAGCCTTTTGTAGTAGAGCTTCTCAT
CTTGGGCAGCAAAAATTGTCTTACAATGGTCGCGACATAGTCTTTGCACCTTACAATGAC
TCTTGGAGAGAAATGCGAAAAATTTGTGTGCTTCACCTATTTAGTCAAAAGAAAGTTCAA
TCATCTAGTCTGATTCGTGAAGATGAAGTCTCAAGAATGATCAAGAAAATATCTCAACAT
GTTGTCACTTCACAAATCACCAATTTGAGCAATTTAATGATTTTACTAAGTAGTAGTATT
ATTTTTAAAGTTGCTTTTGGTATTAGGTATGACGAAGAATCACATGAAAGTAGGAGGTTC
TATTTTCTTTTTGAAGAAGCTGCAACAATGATGACTAGCTTCTTTGTGTCTGATTTTTTT
CCTTCTTTAAATTGGATCGATAAACTTACTGGATTGACAAATAGACTTGATAAGAATTTC
AAGGAGTTGGATGAGATTTATGAAGAACTCATTAAGCAGCATCTTAATCCCAATAGGCCA
AAATCCATGGAAGGGGACATTCTTGATGTTTTGCTCCAATTGAAGAAAGAGAAATCAACA
CCAATTGATCTCACTTTGGAGGATATAAAAGCAATTGTCATGAATGTGTTACTTGCAGGA
TCAGAAACTAGCGCGGCTGCGGTAGTATGGACAATGACAGCCTTGATAAAGAATCCAAAA
GCCATGAAGAAAGTTCAAGAAGAAATAAGAAAATCAATTGGGAACAAAGGCATTGTGAAT
GAAGATGACATCCAAAATATGCCCTATTTCAAAGCAGTGATAAAGGAGGCTTTCAGATTA
TATCCATCATCTCCACTTTTACTGCCAAGAGAAACAATGAAAAAATCCACACTAGAAGGG
TATGAAATTCAGCGAGGAACTATAGTCCAAGTTAATGCATGGGCAATTGCAAGGGATTCT
GAAATATGGAAAAATTCAGAAGAATTTATACCTGAGAGATTCTTAAATAGCAATATTGAT
TTTAAGGGACAAGATTTTGAGTTTATTCCATTTGGAGCGGGAAGAAAAGGGTGCCCAGGG
ATGGCACTTGGGGTTGCATCAGTGGAACTTGCATTGTCAAATCTTCTTTATTCATTTGAT
TGGGAATTACCTTTTGGGATGAAAAAGGAAGACATTGACACAGATGTTAAGCCTGGACTT
ACCATGCATAAGAAGAATGATCTTTGCCTTATCCCTAAATATTATATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054857
PEP Infomation

pacid=37455082 transcript=PGSC0003DMT400080928 locus=PGSC0003DMG402031520 ID=PGSC0003DMT400080928.v4.03 annot-version=v4.03
Sequence

MMLFLLFVAFPILLIFLLPKAKRIGKNNLPPGPKGLPFIGNFHQFDSLAPHIYFWKLSKK
YGKIFSLKFGSTPIIVISSAKLAKEVLKTQDLAFCSRASHLGQQKLSYNGRDIVFAPYND
SWREMRKICVLHLFSQKKVQSSSLIREDEVSRMIKKISQHVVTSQITNLSNLMILLSSSI
IFKVAFGIRYDEESHESRRFYFLFEEAATMMTSFFVSDFFPSLNWIDKLTGLTNRLDKNF
KELDEIYEELIKQHLNPNRPKSMEGDILDVLLQLKKEKSTPIDLTLEDIKAIVMNVLLAG
SETSAAAVVWTMTALIKNPKAMKKVQEEIRKSIGNKGIVNEDDIQNMPYFKAVIKEAFRL
YPSSPLLLPRETMKKSTLEGYEIQRGTIVQVNAWAIARDSEIWKNSEEFIPERFLNSNID
FKGQDFEFIPFGAGRKGCPGMALGVASVELALSNLLYSFDWELPFGMKKEDIDTDVKPGL
TMHKKNDLCLIPKYYM*

Transcript Sequence

Transcript ID

PGSC0003DMT400080928
Transcript Infomation

pacid=37455082 locus=PGSC0003DMG402031520 ID=PGSC0003DMT400080928.v4.03 annot-version=v4.03
Sequence

ATGATGCTCTTTCTACTCTTTGTAGCCTTTCCTATCCTTCTTATTTTTCTTCTTCCTAAA
GCCAAAAGGATTGGCAAAAACAATCTGCCACCAGGTCCTAAAGGCCTCCCATTCATTGGA
AATTTTCATCAATTTGATAGTTTAGCCCCTCATATCTATTTTTGGAAACTTTCCAAAAAA
TATGGAAAAATATTTTCATTAAAATTTGGTTCTACTCCAATAATTGTGATTTCTTCAGCA
AAATTAGCAAAAGAAGTGTTGAAGACACAAGATTTAGCCTTTTGTAGTAGAGCTTCTCAT
CTTGGGCAGCAAAAATTGTCTTACAATGGTCGCGACATAGTCTTTGCACCTTACAATGAC
TCTTGGAGAGAAATGCGAAAAATTTGTGTGCTTCACCTATTTAGTCAAAAGAAAGTTCAA
TCATCTAGTCTGATTCGTGAAGATGAAGTCTCAAGAATGATCAAGAAAATATCTCAACAT
GTTGTCACTTCACAAATCACCAATTTGAGCAATTTAATGATTTTACTAAGTAGTAGTATT
ATTTTTAAAGTTGCTTTTGGTATTAGGTATGACGAAGAATCACATGAAAGTAGGAGGTTC
TATTTTCTTTTTGAAGAAGCTGCAACAATGATGACTAGCTTCTTTGTGTCTGATTTTTTT
CCTTCTTTAAATTGGATCGATAAACTTACTGGATTGACAAATAGACTTGATAAGAATTTC
AAGGAGTTGGATGAGATTTATGAAGAACTCATTAAGCAGCATCTTAATCCCAATAGGCCA
AAATCCATGGAAGGGGACATTCTTGATGTTTTGCTCCAATTGAAGAAAGAGAAATCAACA
CCAATTGATCTCACTTTGGAGGATATAAAAGCAATTGTCATGAATGTGTTACTTGCAGGA
TCAGAAACTAGCGCGGCTGCGGTAGTATGGACAATGACAGCCTTGATAAAGAATCCAAAA
GCCATGAAGAAAGTTCAAGAAGAAATAAGAAAATCAATTGGGAACAAAGGCATTGTGAAT
GAAGATGACATCCAAAATATGCCCTATTTCAAAGCAGTGATAAAGGAGGCTTTCAGATTA
TATCCATCATCTCCACTTTTACTGCCAAGAGAAACAATGAAAAAATCCACACTAGAAGGG
TATGAAATTCAGCGAGGAACTATAGTCCAAGTTAATGCATGGGCAATTGCAAGGGATTCT
GAAATATGGAAAAATTCAGAAGAATTTATACCTGAGAGATTCTTAAATAGCAATATTGAT
TTTAAGGGACAAGATTTTGAGTTTATTCCATTTGGAGCGGGAAGAAAAGGGTGCCCAGGG
ATGGCACTTGGGGTTGCATCAGTGGAACTTGCATTGTCAAATCTTCTTTATTCATTTGAT
TGGGAATTACCTTTTGGGATGAAAAAGGAAGACATTGACACAGATGTTAAGCCTGGACTT
ACCATGCATAAGAAGAATGATCTTTGCCTTATCCCTAAATATTATATGTAG