Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080925
CDS Infomation

pacid=37456793 polypeptide=PGSC0003DMP400054854 locus=PGSC0003DMG401031520 ID=PGSC0003DMT400080925.v4.03 annot-version=v4.03
Sequence

ATGATACTCTTTCTACTCTTTGTAGCCTTTCCTATCCTTCTTATTTTTCTTCTTTCTAAA
GCCAAAAAGAGTAGCAAAAACAATCTGCCACCAGGTCCTATTGGCCTTCCATTCATTGGA
AATTTGCATCAATTTGATAGTTTAGCCCCTCATATCTATTTTTGGAAACTTTCCAAGAAA
TATGGAAAAATATTTTCATTGAAATTTGGCTCTACTCCAATAATTGTAATTTCTTCAGCA
AAATTGGCAAAAAAAGTGTTGAAAACACAAGATCTAGTATTTTGTAGTAGACCTTCTCAT
CTTGGGCAGCAAAAATTGTCTTACAATGGTCGCGACATAGTCTTTCAACGCTACAATGAT
TATTGGAGAGAAATGAGAAAAATAAGTGTTCTTCATCTATTTAGTCACAAGAAAGTGAAA
TTATTTAGTCCAATTCGCGAAGATGAAGTCTCGAGAATGATCAAGAAAATATCTCAACAA
GCTAGTGTTTCGCAAATAACTAATTTGAGCAATTTAATGATTTCACTAAGTACTACGATT
ATTTGTAGAGTTGCTTTTGGCATTAGGTTTGATGAAGAAGCACATGAAAAGAGGAGATTT
GATGAACTTTTAGAAGAATCTGCAACAATGTTGACTAGCTTTTATGTTTCTGACTTTTTT
CCTTATTTAGGTTGGATTGATAAATTCACTGGATTGACAAATAGACTTGAGAAGAATTTC
AAGGATTTGGATGAGTTTTATGAAGAACTCGTTGAGAAGCATGTTGATCCCAATAGGCCA
AAATCCATGGAAGGGGACATTCTTGATCTTTTGCTCCAATTGAAGAGAGATAAATTAACA
CCAATTGATCTCACTTTGGAGGACATAAAAGCAATTGTCATGAATGTGTTACTTGCAGGA
TCAGACACTAGTGCCGCTGCAGTAATATGGACAATGACAGCCTTGATGAAGAATCCAAAA
GCTATGAAAAAAGTTCAAGAAGAAATGAGAAAATCATTCAAAAAGAAACGCGATATATTG
AATGAAGACGATATCCAAAATCTTCCCTATTTCAAAGCAGTGATAAAAGAGTCATTTAGA
TTGTATCCATCAGTTCCACTCCTACTGCCAAGAGAATCAATGGAAAAATCCATACTAGAA
GGGTATGAAATTCAACCAGGAACTATAATTAATGTTAATGCATGGGCTATTGCACGAGAT
CCTGAAATATGGGAAAATCCAGAAGAATTTATACCCGAGAGATTCTTGAATAGTGACATC
GATTTCAAAGGACAAGACTTTGAGTTAATTCCATTTGGAGCAGGAAGAAGAGGATGTCCA
GGGATTGCACTTGGAGTTGCATCGATGGAACTTGCATTATCAAATCTTCTTTACGCGTTT
GATTGGGAGTTGCCTTGTGGGATGAAAAAAGAGGATATTGACACAAATGTTAAGCCTGGA
ATTACCATGCATAAGAAAAATGACCTTTGCCTTATTCCTAAGAATTATCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400054854
PEP Infomation

pacid=37456793 transcript=PGSC0003DMT400080925 locus=PGSC0003DMG401031520 ID=PGSC0003DMT400080925.v4.03 annot-version=v4.03
Sequence

MILFLLFVAFPILLIFLLSKAKKSSKNNLPPGPIGLPFIGNLHQFDSLAPHIYFWKLSKK
YGKIFSLKFGSTPIIVISSAKLAKKVLKTQDLVFCSRPSHLGQQKLSYNGRDIVFQRYND
YWREMRKISVLHLFSHKKVKLFSPIREDEVSRMIKKISQQASVSQITNLSNLMISLSTTI
ICRVAFGIRFDEEAHEKRRFDELLEESATMLTSFYVSDFFPYLGWIDKFTGLTNRLEKNF
KDLDEFYEELVEKHVDPNRPKSMEGDILDLLLQLKRDKLTPIDLTLEDIKAIVMNVLLAG
SDTSAAAVIWTMTALMKNPKAMKKVQEEMRKSFKKKRDILNEDDIQNLPYFKAVIKESFR
LYPSVPLLLPRESMEKSILEGYEIQPGTIINVNAWAIARDPEIWENPEEFIPERFLNSDI
DFKGQDFELIPFGAGRRGCPGIALGVASMELALSNLLYAFDWELPCGMKKEDIDTNVKPG
ITMHKKNDLCLIPKNYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400080925
Transcript Infomation

pacid=37456793 locus=PGSC0003DMG401031520 ID=PGSC0003DMT400080925.v4.03 annot-version=v4.03
Sequence

ATGATACTCTTTCTACTCTTTGTAGCCTTTCCTATCCTTCTTATTTTTCTTCTTTCTAAA
GCCAAAAAGAGTAGCAAAAACAATCTGCCACCAGGTCCTATTGGCCTTCCATTCATTGGA
AATTTGCATCAATTTGATAGTTTAGCCCCTCATATCTATTTTTGGAAACTTTCCAAGAAA
TATGGAAAAATATTTTCATTGAAATTTGGCTCTACTCCAATAATTGTAATTTCTTCAGCA
AAATTGGCAAAAAAAGTGTTGAAAACACAAGATCTAGTATTTTGTAGTAGACCTTCTCAT
CTTGGGCAGCAAAAATTGTCTTACAATGGTCGCGACATAGTCTTTCAACGCTACAATGAT
TATTGGAGAGAAATGAGAAAAATAAGTGTTCTTCATCTATTTAGTCACAAGAAAGTGAAA
TTATTTAGTCCAATTCGCGAAGATGAAGTCTCGAGAATGATCAAGAAAATATCTCAACAA
GCTAGTGTTTCGCAAATAACTAATTTGAGCAATTTAATGATTTCACTAAGTACTACGATT
ATTTGTAGAGTTGCTTTTGGCATTAGGTTTGATGAAGAAGCACATGAAAAGAGGAGATTT
GATGAACTTTTAGAAGAATCTGCAACAATGTTGACTAGCTTTTATGTTTCTGACTTTTTT
CCTTATTTAGGTTGGATTGATAAATTCACTGGATTGACAAATAGACTTGAGAAGAATTTC
AAGGATTTGGATGAGTTTTATGAAGAACTCGTTGAGAAGCATGTTGATCCCAATAGGCCA
AAATCCATGGAAGGGGACATTCTTGATCTTTTGCTCCAATTGAAGAGAGATAAATTAACA
CCAATTGATCTCACTTTGGAGGACATAAAAGCAATTGTCATGAATGTGTTACTTGCAGGA
TCAGACACTAGTGCCGCTGCAGTAATATGGACAATGACAGCCTTGATGAAGAATCCAAAA
GCTATGAAAAAAGTTCAAGAAGAAATGAGAAAATCATTCAAAAAGAAACGCGATATATTG
AATGAAGACGATATCCAAAATCTTCCCTATTTCAAAGCAGTGATAAAAGAGTCATTTAGA
TTGTATCCATCAGTTCCACTCCTACTGCCAAGAGAATCAATGGAAAAATCCATACTAGAA
GGGTATGAAATTCAACCAGGAACTATAATTAATGTTAATGCATGGGCTATTGCACGAGAT
CCTGAAATATGGGAAAATCCAGAAGAATTTATACCCGAGAGATTCTTGAATAGTGACATC
GATTTCAAAGGACAAGACTTTGAGTTAATTCCATTTGGAGCAGGAAGAAGAGGATGTCCA
GGGATTGCACTTGGAGTTGCATCGATGGAACTTGCATTATCAAATCTTCTTTACGCGTTT
GATTGGGAGTTGCCTTGTGGGATGAAAAAAGAGGATATTGACACAAATGTTAAGCCTGGA
ATTACCATGCATAAGAAAAATGACCTTTGCCTTATTCCTAAGAATTATCTATAG