Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080921
CDS Infomation

pacid=37458565 polypeptide=PGSC0003DMP400054850 locus=PGSC0003DMG400031519 ID=PGSC0003DMT400080921.v4.03 annot-version=v4.03
Sequence

ATGATTCTCCTTCTACTCTTTGTAGCCTTTCCAATTTTGCTCATTTTTCTCCTTAGTGGA
AAAAGAAATCTGCCACCAGGTCCTATAGGCCTTCCATTTATTGGAAATTTGCATCAATAT
GATAGTTTAACTCCTCATCTCTATTTTTTGAAACTTTCTAAAAAATATGGAAAATTTTTC
TCATTGAAACTTGGTTCTTCTACTATGGTGGTAGTTTCTTCAGCAAAATTAGCAAAAGAA
GTATTGAAGACACAAGATTTAGTATTTTGTAGTAGACCTTCTCTTCTTGGACAACAAAAA
TTGTCTTACAATGGTCATGATATTGCCTTTGCACCTTATAATGACTATTGGAGAGAAATG
AGAAAAATTTGTGTGCTTCAATTATTTAGTCTAAAAAAGGTACAATCTTTTAGTCCGATT
CGTGAAGATGAAGTATCAAGAATGATCAAGAAAATATCTCAACTAGCTGCGTCTTCTCAA
ATTACAAATTTGAGTAGTTTAATGATTTCATTAACAAGTACGATAATTTGTAGAGTTGCT
TTTGGTGTTAGGTTTGATGAAGAAGCGCACGAAAGAAAGAGATTTGATTATCTTTTAGCT
GAGGCTCAAGCTATGATGGCTACCTTTTTTGTGTCTGATTTTTTTCCTTCTTTAAGTTGG
ATTGATAAACTTACTGGACAGACAGATAGACTCGAGAGAAATTTCAAGAATTTGAATGAG
TTTTATGAAGAACTCATTGAGCAACATCAGAATCCCAATAGGCCAAAATCTATGGAAGGA
GATATTCTTGATCTTTTGCTTCAATTGAAGAAAGAGCAATCAACACCAATTGATCTCACT
ATGGAGGACATAAAAGGACTTCTAATGAATGTGTTGGTTGCTGGATCAGACACTAGTGCA
GCTGTAGTAGTATGGGCAATGACAGCCTTGATGAAAAATCCAAAAGTCATGAAGAAAGTT
CAAGAAGAAATTAGAAAATCAATTGGGACCAAAGGCATTGTGAATGAAGATGATATTCAA
AATATGTCTTATCTCAAAGCAGTTATAAAAGAGACATTTAGATTATATCCACCAGATCCA
CTCCTAATACCAAGAGAATCAATGAAAAAATCCACACTAGAAGGGTATGAAATTCAGCAA
GGAACTATAGTTCATATTAACGCATGGGCAATTGCAAGGGATCCTGAAATATGGGAAAAT
CCTAAAGAATTTATACCTGAGAGATTTTTGAATAGCGATATTGATTTCAAGAAAGAAGAT
TACCAGTTAATTCCGTTTGGAGCAGGAAGAAGAGGATGCCCCGGGATTACACTTGGAATT
ACAGCCATAGAACTTGCATTATCAAATCTTCTTTATGCGTTTGATTGGGAGTTACCCTAT
GGATCGAAAAAAGAGGACATTGACACAAATGTTAGGCATGGAATCACCATGCATAAGAAA
AATGATCTTTGCCTTATCCCTAATAAATATTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400054850
PEP Infomation

pacid=37458565 transcript=PGSC0003DMT400080921 locus=PGSC0003DMG400031519 ID=PGSC0003DMT400080921.v4.03 annot-version=v4.03
Sequence

MILLLLFVAFPILLIFLLSGKRNLPPGPIGLPFIGNLHQYDSLTPHLYFLKLSKKYGKFF
SLKLGSSTMVVVSSAKLAKEVLKTQDLVFCSRPSLLGQQKLSYNGHDIAFAPYNDYWREM
RKICVLQLFSLKKVQSFSPIREDEVSRMIKKISQLAASSQITNLSSLMISLTSTIICRVA
FGVRFDEEAHERKRFDYLLAEAQAMMATFFVSDFFPSLSWIDKLTGQTDRLERNFKNLNE
FYEELIEQHQNPNRPKSMEGDILDLLLQLKKEQSTPIDLTMEDIKGLLMNVLVAGSDTSA
AVVVWAMTALMKNPKVMKKVQEEIRKSIGTKGIVNEDDIQNMSYLKAVIKETFRLYPPDP
LLIPRESMKKSTLEGYEIQQGTIVHINAWAIARDPEIWENPKEFIPERFLNSDIDFKKED
YQLIPFGAGRRGCPGITLGITAIELALSNLLYAFDWELPYGSKKEDIDTNVRHGITMHKK
NDLCLIPNKYF*

Transcript Sequence

Transcript ID

PGSC0003DMT400080921
Transcript Infomation

pacid=37458565 locus=PGSC0003DMG400031519 ID=PGSC0003DMT400080921.v4.03 annot-version=v4.03
Sequence

ATGATTCTCCTTCTACTCTTTGTAGCCTTTCCAATTTTGCTCATTTTTCTCCTTAGTGGA
AAAAGAAATCTGCCACCAGGTCCTATAGGCCTTCCATTTATTGGAAATTTGCATCAATAT
GATAGTTTAACTCCTCATCTCTATTTTTTGAAACTTTCTAAAAAATATGGAAAATTTTTC
TCATTGAAACTTGGTTCTTCTACTATGGTGGTAGTTTCTTCAGCAAAATTAGCAAAAGAA
GTATTGAAGACACAAGATTTAGTATTTTGTAGTAGACCTTCTCTTCTTGGACAACAAAAA
TTGTCTTACAATGGTCATGATATTGCCTTTGCACCTTATAATGACTATTGGAGAGAAATG
AGAAAAATTTGTGTGCTTCAATTATTTAGTCTAAAAAAGGTACAATCTTTTAGTCCGATT
CGTGAAGATGAAGTATCAAGAATGATCAAGAAAATATCTCAACTAGCTGCGTCTTCTCAA
ATTACAAATTTGAGTAGTTTAATGATTTCATTAACAAGTACGATAATTTGTAGAGTTGCT
TTTGGTGTTAGGTTTGATGAAGAAGCGCACGAAAGAAAGAGATTTGATTATCTTTTAGCT
GAGGCTCAAGCTATGATGGCTACCTTTTTTGTGTCTGATTTTTTTCCTTCTTTAAGTTGG
ATTGATAAACTTACTGGACAGACAGATAGACTCGAGAGAAATTTCAAGAATTTGAATGAG
TTTTATGAAGAACTCATTGAGCAACATCAGAATCCCAATAGGCCAAAATCTATGGAAGGA
GATATTCTTGATCTTTTGCTTCAATTGAAGAAAGAGCAATCAACACCAATTGATCTCACT
ATGGAGGACATAAAAGGACTTCTAATGAATGTGTTGGTTGCTGGATCAGACACTAGTGCA
GCTGTAGTAGTATGGGCAATGACAGCCTTGATGAAAAATCCAAAAGTCATGAAGAAAGTT
CAAGAAGAAATTAGAAAATCAATTGGGACCAAAGGCATTGTGAATGAAGATGATATTCAA
AATATGTCTTATCTCAAAGCAGTTATAAAAGAGACATTTAGATTATATCCACCAGATCCA
CTCCTAATACCAAGAGAATCAATGAAAAAATCCACACTAGAAGGGTATGAAATTCAGCAA
GGAACTATAGTTCATATTAACGCATGGGCAATTGCAAGGGATCCTGAAATATGGGAAAAT
CCTAAAGAATTTATACCTGAGAGATTTTTGAATAGCGATATTGATTTCAAGAAAGAAGAT
TACCAGTTAATTCCGTTTGGAGCAGGAAGAAGAGGATGCCCCGGGATTACACTTGGAATT
ACAGCCATAGAACTTGCATTATCAAATCTTCTTTATGCGTTTGATTGGGAGTTACCCTAT
GGATCGAAAAAAGAGGACATTGACACAAATGTTAGGCATGGAATCACCATGCATAAGAAA
AATGATCTTTGCCTTATCCCTAATAAATATTTCTAA