Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080864
CDS Infomation

pacid=37459528 polypeptide=PGSC0003DMP400054812 locus=PGSC0003DMG400031491 ID=PGSC0003DMT400080864.v4.03 annot-version=v4.03
Sequence

ATGGAGGCTGAGAAAGTAACAGGCATTCATGGTTGTTGCCCCAATCCTCTCCTTATACTT
CTTGAGCCTCAAAACCATCAGCCACTTCCTAAGCCCAAAAGCACAACCGCAGCTTGCCGG
CACACCTTTGCAGCCACAACAACTTCCTCTTTTTTCCCAAATACTCATTTCACTAACCAT
GAATCCCTTCCTTCACATCAAGAATCATCTGCTCAGTTCCTCAAAGCTTATCCTAAGTAT
TCCGAATCTTGCCAAGTCGACAAGATTCGGGATCAAGAATACTATCATCTGTCAGTTTCT
AACCATGTGTGCCTGGATTACATTGGCATTGGTCTCTTCTCTTACTCACAGGTTCAATCA
CAGGTTTCTGCGGTTGTCCCGCTGACATCCTCTTCTTCTTCTCCGTCATCTCATGAATGT
AGTGAGTATCCTTTCTTTGACATATCTTGCAAGTCTGTTGATCTCAAATCCGAGCTATTA
CATGGCGGTGATGGATCACAATTGGAATCCTGTATCAAGAAAAAGATCATGAATTTTCTT
AACATGTCTACAAATGAATATTCCATGGTTTTTACTGCTAATAGATCATCAGCTTTCAAG
CTTATAGCCGAATCTTACCCTTTCAAAACTAGTAAAAAGCTTCTTACAGTTTATGATCAT
GAGAGTGAAGCATTGGAGACTATGGTCAATACATCAGAGAAAAGAGGGGCTAATATAATG
TCAGCAGAATTTAAATGGCCACGGCTAAGAATTAACTCCGTGAAACTCAGGAAACTGATT
ATAAGGAAGAAAAAGCAAAAGAAATCAAGGGGACTATTTGTGTTCCCCCTTCAGTCAAGA
GCGACCGGAGCGAGTTACTCTTATCAGTGGATGAGTTTGGCGCAGGAAAATGGTTGGCAT
GTTTTGCTTGATGCATGTGCATTGGGACCGAAGGACATGGATAGCTTTGGACTTTCCTTA
ATCCATCCTGACTTCCTTATTTGCTCTTTCTATAAGGTTTTTGGTGAAAATCCTACAGGG
TTTGGATGCCTCCTTGTCAAGAAATCAGTTGTATCGATGTTGGAAGCTTCGGTTAGTACA
GGCATTGTAAGTCTTGTTCCACCAACACAACTCTTAAATTCACTAGATTCATCAGGCAGT
GGCACGGAGCTTGAACAAAAAACCAATTTTGTTACAAAACTGGATGAGCTGCATATATCT
GGCTCTAATTCAGCTCACAATTCTGCTAAATCCACACACAACAATGAATCTGGAAAAGAT
GCTCCAAAGGATAAGAGCAAAGAGGAATTAGATCAATCCATTAGTACACTAGGCGACAAC
ACTAAGCTGGAAGAAAAGGGAAGCATAGAGATTCAATGCAGATGCTTGGATCATGTGGAT
TCGCTCGGACTGATGCAAATTGGAAACAGAAGAAGGTATCTAGTCAATTGGCTTATTAGT
GCACTCCTGAAACTTAAGCATCCAAATAGATTGGACCATTTTCCTCTGGTCAAAATCTAT
GGACCAAAGATAAAATTTGACAGGGGAACTGCTATGGCGTTTAATCTGTTCGACTGGAAA
GGAGAAAGGGTGGAACCAATTCTCATACAGAAGCTTGCTGATCGGAACAATATTTCTCTC
AGCCATGGGTTTCTGTCACATTTGTGGTTTCCAGACAAGTATGAGGAAGAGAAGCAGAGG
ACTATAGAAGGAAAAAAGTGTGACGAAAAAGATGCACAGAACAAAAAATCTAAAAAAACG
GACTTTGGGATATCAGTAGTTACCATTGCCCTTAGCTTTCTGGCCAACTTTGAAGATGTT
TACCGGCTTTGGACATTCATAGCTCAGTTTCTTGACGCAGACTTTGTGGAGAAAGAACGG
TGGAGATACAGCTCTCTGTATCAGAAAACGATTGAAGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054812
PEP Infomation

pacid=37459528 transcript=PGSC0003DMT400080864 locus=PGSC0003DMG400031491 ID=PGSC0003DMT400080864.v4.03 annot-version=v4.03
Sequence

MEAEKVTGIHGCCPNPLLILLEPQNHQPLPKPKSTTAACRHTFAATTTSSFFPNTHFTNH
ESLPSHQESSAQFLKAYPKYSESCQVDKIRDQEYYHLSVSNHVCLDYIGIGLFSYSQVQS
QVSAVVPLTSSSSSPSSHECSEYPFFDISCKSVDLKSELLHGGDGSQLESCIKKKIMNFL
NMSTNEYSMVFTANRSSAFKLIAESYPFKTSKKLLTVYDHESEALETMVNTSEKRGANIM
SAEFKWPRLRINSVKLRKLIIRKKKQKKSRGLFVFPLQSRATGASYSYQWMSLAQENGWH
VLLDACALGPKDMDSFGLSLIHPDFLICSFYKVFGENPTGFGCLLVKKSVVSMLEASVST
GIVSLVPPTQLLNSLDSSGSGTELEQKTNFVTKLDELHISGSNSAHNSAKSTHNNESGKD
APKDKSKEELDQSISTLGDNTKLEEKGSIEIQCRCLDHVDSLGLMQIGNRRRYLVNWLIS
ALLKLKHPNRLDHFPLVKIYGPKIKFDRGTAMAFNLFDWKGERVEPILIQKLADRNNISL
SHGFLSHLWFPDKYEEEKQRTIEGKKCDEKDAQNKKSKKTDFGISVVTIALSFLANFEDV
YRLWTFIAQFLDADFVEKERWRYSSLYQKTIEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400080864
Transcript Infomation

pacid=37459528 locus=PGSC0003DMG400031491 ID=PGSC0003DMT400080864.v4.03 annot-version=v4.03
Sequence

ATGGAGGCTGAGAAAGTAACAGGCATTCATGGTTGTTGCCCCAATCCTCTCCTTATACTT
CTTGAGCCTCAAAACCATCAGCCACTTCCTAAGCCCAAAAGCACAACCGCAGCTTGCCGG
CACACCTTTGCAGCCACAACAACTTCCTCTTTTTTCCCAAATACTCATTTCACTAACCAT
GAATCCCTTCCTTCACATCAAGAATCATCTGCTCAGTTCCTCAAAGCTTATCCTAAGTAT
TCCGAATCTTGCCAAGTCGACAAGATTCGGGATCAAGAATACTATCATCTGTCAGTTTCT
AACCATGTGTGCCTGGATTACATTGGCATTGGTCTCTTCTCTTACTCACAGGTTCAATCA
CAGGTTTCTGCGGTTGTCCCGCTGACATCCTCTTCTTCTTCTCCGTCATCTCATGAATGT
AGTGAGTATCCTTTCTTTGACATATCTTGCAAGTCTGTTGATCTCAAATCCGAGCTATTA
CATGGCGGTGATGGATCACAATTGGAATCCTGTATCAAGAAAAAGATCATGAATTTTCTT
AACATGTCTACAAATGAATATTCCATGGTTTTTACTGCTAATAGATCATCAGCTTTCAAG
CTTATAGCCGAATCTTACCCTTTCAAAACTAGTAAAAAGCTTCTTACAGTTTATGATCAT
GAGAGTGAAGCATTGGAGACTATGGTCAATACATCAGAGAAAAGAGGGGCTAATATAATG
TCAGCAGAATTTAAATGGCCACGGCTAAGAATTAACTCCGTGAAACTCAGGAAACTGATT
ATAAGGAAGAAAAAGCAAAAGAAATCAAGGGGACTATTTGTGTTCCCCCTTCAGTCAAGA
GCGACCGGAGCGAGTTACTCTTATCAGTGGATGAGTTTGGCGCAGGAAAATGGTTGGCAT
GTTTTGCTTGATGCATGTGCATTGGGACCGAAGGACATGGATAGCTTTGGACTTTCCTTA
ATCCATCCTGACTTCCTTATTTGCTCTTTCTATAAGGTTTTTGGTGAAAATCCTACAGGG
TTTGGATGCCTCCTTGTCAAGAAATCAGTTGTATCGATGTTGGAAGCTTCGGTTAGTACA
GGCATTGTAAGTCTTGTTCCACCAACACAACTCTTAAATTCACTAGATTCATCAGGCAGT
GGCACGGAGCTTGAACAAAAAACCAATTTTGTTACAAAACTGGATGAGCTGCATATATCT
GGCTCTAATTCAGCTCACAATTCTGCTAAATCCACACACAACAATGAATCTGGAAAAGAT
GCTCCAAAGGATAAGAGCAAAGAGGAATTAGATCAATCCATTAGTACACTAGGCGACAAC
ACTAAGCTGGAAGAAAAGGGAAGCATAGAGATTCAATGCAGATGCTTGGATCATGTGGAT
TCGCTCGGACTGATGCAAATTGGAAACAGAAGAAGGTATCTAGTCAATTGGCTTATTAGT
GCACTCCTGAAACTTAAGCATCCAAATAGATTGGACCATTTTCCTCTGGTCAAAATCTAT
GGACCAAAGATAAAATTTGACAGGGGAACTGCTATGGCGTTTAATCTGTTCGACTGGAAA
GGAGAAAGGGTGGAACCAATTCTCATACAGAAGCTTGCTGATCGGAACAATATTTCTCTC
AGCCATGGGTTTCTGTCACATTTGTGGTTTCCAGACAAGTATGAGGAAGAGAAGCAGAGG
ACTATAGAAGGAAAAAAGTGTGACGAAAAAGATGCACAGAACAAAAAATCTAAAAAAACG
GACTTTGGGATATCAGTAGTTACCATTGCCCTTAGCTTTCTGGCCAACTTTGAAGATGTT
TACCGGCTTTGGACATTCATAGCTCAGTTTCTTGACGCAGACTTTGTGGAGAAAGAACGG
TGGAGATACAGCTCTCTGTATCAGAAAACGATTGAAGTTTAG