Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080854
CDS Infomation

pacid=37439513 polypeptide=PGSC0003DMP400054808 locus=PGSC0003DMG400031486 ID=PGSC0003DMT400080854.v4.03 annot-version=v4.03
Sequence

ATGTCTCAACAGATTAGTCTTTCTGATCCTGAACGTTGTCTCATTCTTAATATATTGCAC
CTTAATTTATCAGCATCTCCTTTCTCCTTCACTGTTGACGAGCGTTATCTTACACTAGAT
AACATTTCAATTTTCAAATGTTCTGGTATGCCAGCATATTATCGGAACCTATATCCAGAT
TGTGCCTCTGACAAATCAATATTTGCTGTTTCCTACTCTTTAGATTTACTCCCCCAGGCA
ACTTGCAAAAAGATTCATGAAATTCCATCATTTCTCTACGATACAATTTACAGTAGTTTG
ATAAGACTCAGTTGGCTTAATCCAAACTGTAGCTACTGTGAAGGTCTTGAAAAGGATTGT
GGCTTCAAGAACTATACTAAACAACTGACTACTCAGTGTTTCGATCGACCATTTACTACA
AAAGGCACAGTAAAGGAACCACTGATTGCAGGTGGAGTTATAGGTCTCATTCTTTTGGGA
ATAATTATTATGGCACTTTATGAGTGTTATAGCTCAAGCAAAATTGAAAGAGAGAATCAA
GTCAGAGTTGAAAAGTTTTTGGAAGACTATAGAGCTCACAGACCGACTAGATATACTTAT
GCAGATATTAAAAAGATAACAAATCAGTTTCAGGAAATATTGGGAGAGGGAGCTTACGGG
ATCGTTTATAAAGGAACACTTTCGAATGAAATTCATGTTGCTGTAAAAATTCTCAATGAT
TCTGAAGGAAATGGGGAAGAATTTATTAATGAAGTTGCAGCAATGGGGAAAATCCATCAT
GTCAACGTGGTTCGCCTAGTTGGCTTTTGTGCTGATGGAGTTAGAAGAGCTCTAGTGTTT
GAATACTTGCCAAATCAGTCACTTGACAAGCTCATTTTTCCGACAAGTTTCAAAGATAAT
ATCACCCTTACTTGGAAGAAGCTTCATGATATTGCTATGGGAATAGCAAAAGGACTAGAG
TATCTTCATCAAGGATGTGACCAACAAATCCTTCATTTCGATATCAAGCCTCAAAATATT
CTGTTAGACCATAACTTGAACCCAAAGATCTCTGATTTTGGTCTTGCCAAGTTATGCTCT
AAAGAGAAAAGTGTTGTCACTATGACTGAAGCTAGAGGAACCATGGGTTATATTGCACCA
GAAGTGTTGTCAAGCAATTTCGGAAAAGCGTCTCATAAATCTGATGTCTATAGCTTTGGA
ATGATGCTACTTGAAATGGTTGGAGGGAGGAAGAATTTTGATGCAAAAGCGGATACTAGC
CAAATGAACTTTCCCGAGTGGATTCATCAGCGGCTGAATCAAGGAGAAGAGTTGAAAATC
AGGATTGAGGAAGATGATGATGTTATAATTGTAAGGAAATTGGCTGTTATAGGACTTTGG
TGCATCCAATGGAATGCGACAGATCGGCCATCCATCAAAATTGTAACTCAAATGCTAGAA
GGAGATGTGAGCAACCTAACTGTTCCTTCTCCTTTTACAACAAGAAACACCACCCATGTA
GGTCCTTCTACGCAAGAGTTGACGGTAATCTCAGAACTAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400054808
PEP Infomation

pacid=37439513 transcript=PGSC0003DMT400080854 locus=PGSC0003DMG400031486 ID=PGSC0003DMT400080854.v4.03 annot-version=v4.03
Sequence

MSQQISLSDPERCLILNILHLNLSASPFSFTVDERYLTLDNISIFKCSGMPAYYRNLYPD
CASDKSIFAVSYSLDLLPQATCKKIHEIPSFLYDTIYSSLIRLSWLNPNCSYCEGLEKDC
GFKNYTKQLTTQCFDRPFTTKGTVKEPLIAGGVIGLILLGIIIMALYECYSSSKIERENQ
VRVEKFLEDYRAHRPTRYTYADIKKITNQFQEILGEGAYGIVYKGTLSNEIHVAVKILND
SEGNGEEFINEVAAMGKIHHVNVVRLVGFCADGVRRALVFEYLPNQSLDKLIFPTSFKDN
ITLTWKKLHDIAMGIAKGLEYLHQGCDQQILHFDIKPQNILLDHNLNPKISDFGLAKLCS
KEKSVVTMTEARGTMGYIAPEVLSSNFGKASHKSDVYSFGMMLLEMVGGRKNFDAKADTS
QMNFPEWIHQRLNQGEELKIRIEEDDDVIIVRKLAVIGLWCIQWNATDRPSIKIVTQMLE
GDVSNLTVPSPFTTRNTTHVGPSTQELTVISELE*

Transcript Sequence

Transcript ID

PGSC0003DMT400080854
Transcript Infomation

pacid=37439513 locus=PGSC0003DMG400031486 ID=PGSC0003DMT400080854.v4.03 annot-version=v4.03
Sequence

ATGTCTCAACAGATTAGTCTTTCTGATCCTGAACGTTGTCTCATTCTTAATATATTGCAC
CTTAATTTATCAGCATCTCCTTTCTCCTTCACTGTTGACGAGCGTTATCTTACACTAGAT
AACATTTCAATTTTCAAATGTTCTGGTATGCCAGCATATTATCGGAACCTATATCCAGAT
TGTGCCTCTGACAAATCAATATTTGCTGTTTCCTACTCTTTAGATTTACTCCCCCAGGCA
ACTTGCAAAAAGATTCATGAAATTCCATCATTTCTCTACGATACAATTTACAGTAGTTTG
ATAAGACTCAGTTGGCTTAATCCAAACTGTAGCTACTGTGAAGGTCTTGAAAAGGATTGT
GGCTTCAAGAACTATACTAAACAACTGACTACTCAGTGTTTCGATCGACCATTTACTACA
AAAGGCACAGTAAAGGAACCACTGATTGCAGGTGGAGTTATAGGTCTCATTCTTTTGGGA
ATAATTATTATGGCACTTTATGAGTGTTATAGCTCAAGCAAAATTGAAAGAGAGAATCAA
GTCAGAGTTGAAAAGTTTTTGGAAGACTATAGAGCTCACAGACCGACTAGATATACTTAT
GCAGATATTAAAAAGATAACAAATCAGTTTCAGGAAATATTGGGAGAGGGAGCTTACGGG
ATCGTTTATAAAGGAACACTTTCGAATGAAATTCATGTTGCTGTAAAAATTCTCAATGAT
TCTGAAGGAAATGGGGAAGAATTTATTAATGAAGTTGCAGCAATGGGGAAAATCCATCAT
GTCAACGTGGTTCGCCTAGTTGGCTTTTGTGCTGATGGAGTTAGAAGAGCTCTAGTGTTT
GAATACTTGCCAAATCAGTCACTTGACAAGCTCATTTTTCCGACAAGTTTCAAAGATAAT
ATCACCCTTACTTGGAAGAAGCTTCATGATATTGCTATGGGAATAGCAAAAGGACTAGAG
TATCTTCATCAAGGATGTGACCAACAAATCCTTCATTTCGATATCAAGCCTCAAAATATT
CTGTTAGACCATAACTTGAACCCAAAGATCTCTGATTTTGGTCTTGCCAAGTTATGCTCT
AAAGAGAAAAGTGTTGTCACTATGACTGAAGCTAGAGGAACCATGGGTTATATTGCACCA
GAAGTGTTGTCAAGCAATTTCGGAAAAGCGTCTCATAAATCTGATGTCTATAGCTTTGGA
ATGATGCTACTTGAAATGGTTGGAGGGAGGAAGAATTTTGATGCAAAAGCGGATACTAGC
CAAATGAACTTTCCCGAGTGGATTCATCAGCGGCTGAATCAAGGAGAAGAGTTGAAAATC
AGGATTGAGGAAGATGATGATGTTATAATTGTAAGGAAATTGGCTGTTATAGGACTTTGG
TGCATCCAATGGAATGCGACAGATCGGCCATCCATCAAAATTGTAACTCAAATGCTAGAA
GGAGATGTGAGCAACCTAACTGTTCCTTCTCCTTTTACAACAAGAAACACCACCCATGTA
GGTCCTTCTACGCAAGAGTTGACGGTAATCTCAGAACTAGAATGA