Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080785
CDS Infomation

pacid=37455118 polypeptide=PGSC0003DMP400054770 locus=PGSC0003DMG400031465 ID=PGSC0003DMT400080785.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTTCACAGTTTTAAAAAGTAAGAAGAAGAAGTCTGAACAGAGTATTCACATC
AAACGTGTGAATCCTCAGGAACATTCTCCTACTGCATTGCCCGAGCCTCAAGTGCAGACA
CGGTCGTTGCAGTCGGCACCTCCAAGTTTTAGAACTAGAGTAAAACCTGTACAGTCGAGT
AATAGAGTTACAAGCAGTAGGGCGCGGGCACTCTCTGCCCCATCTAGCCTGGACTCAGCA
GAACAAGATGTAGCATCAAATGAATGTGAGGAACATGATGAGTTCAAGAGTCGTATTGGT
TCAATCAAGGAGTACCAATCACCAAGTCCTCAGCCTCTTCCTCTTCCATCTCCACAGAGT
GCCGCTGCCACTCTCAAGACTATGGGAAGCTTTAAAGTTGGCAATGCCAGCGGTCCTTTA
AATGCCTCTGGACCCCTGCCACTGCCTCCTACACTGCCTTCAACATTGCCTTCTACTGGA
GCACTCAGGAACTTCTCATTTGAAGAACTTGCTGCTGCCTGCCACCGCTTCTCACCTGAA
CGGTGTATGTCAGAAGGTCTCTCTTCTGTTATTTACAGAGCTTCTTTTGGAGATGATGCA
ACTGGTACAAAGAAGCTTGAAGCCACTGTAACCCGGCTTCATCCTTCTTCGCAGGGGTTG
AAGGAATTTGTGACTGAGGTGAACACACTAGCTTCTTTGCAACATCCATCACTTTGTAAA
CTGATTGGTTTCCATGCACGGGAAGGTTCCGAGCACAGAATGTTGGTTTATGAAAGGCTT
TTTCATGGAAGCTTAGACCGGCTTTTGTTTGGGAGGTCAGATGGTCCACCGATAGACTGG
AATGCTCGAACGAAAATTGCTTTATGTGCTGCTCAAGGTCTCACATTCCTGCATGAGGAA
GGACCTTTTCAGGCAATGTTCCATGAATTTTCCACTGCAAATATACAAATTGATAAGGAT
TGCAGTGCAAAGCTCTCGGGATATGGATGCATTACTCATATACAAGAGACAGACATATCA
TGCAGTTCAGCTGCCCTGGCAAATCTCTCTGAGGAGACTCTGGAGCGAGGATTGGTAACT
CCGAAGAGCAATGTTTGGAGTTTTGGGATTGTTCTTCTTGAGCTGCTGACTGGCCGGAAG
AATTTTGACAGTCGGCATCCAAAGGAAGAGAGGAATTTAGTGAAGTGGAGCAGGCCTTTC
CTAGCTGATGACGGTAGATTATCGCTAATCATGGACCCTCAGTTAAAAGGTCGGTTCCCT
GCCAAAGCAGCAAGAACAGTGGCTGATATTGCTCAAAGATGTCTGCAAAAGGATCCATCT
GAAAGGCCCACCATGAGAACTGTAGTGGAGCAACTCAAGGCTGTACAAGTGATGAAGTAC
CCTTCTAGGTTTCCTCTTCAAGAGCCATGGGCAGTTGGTGTAAAACGCATGTCAAAGTCT
CCGAGCCTAAATGGAATCATTACCCCAACATCAAGATTGAGCTTCACCCCTTCACCACCA
ACCCACCCTTTATCTATTTCTCCGACAAGGACAGCTGCTCCACTGCTGTCTCTACCTTCA
TGTTCCTCCATCCTCTCTATGGAGGACTTTGATCGATTGGAAAACCGAAGGCCATCATCT
TCATCTGTTCGGAGGTCTAGTGTCGAAGGATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054770
PEP Infomation

pacid=37455118 transcript=PGSC0003DMT400080785 locus=PGSC0003DMG400031465 ID=PGSC0003DMT400080785.v4.03 annot-version=v4.03
Sequence

MGCFTVLKSKKKKSEQSIHIKRVNPQEHSPTALPEPQVQTRSLQSAPPSFRTRVKPVQSS
NRVTSSRARALSAPSSLDSAEQDVASNECEEHDEFKSRIGSIKEYQSPSPQPLPLPSPQS
AAATLKTMGSFKVGNASGPLNASGPLPLPPTLPSTLPSTGALRNFSFEELAAACHRFSPE
RCMSEGLSSVIYRASFGDDATGTKKLEATVTRLHPSSQGLKEFVTEVNTLASLQHPSLCK
LIGFHAREGSEHRMLVYERLFHGSLDRLLFGRSDGPPIDWNARTKIALCAAQGLTFLHEE
GPFQAMFHEFSTANIQIDKDCSAKLSGYGCITHIQETDISCSSAALANLSEETLERGLVT
PKSNVWSFGIVLLELLTGRKNFDSRHPKEERNLVKWSRPFLADDGRLSLIMDPQLKGRFP
AKAARTVADIAQRCLQKDPSERPTMRTVVEQLKAVQVMKYPSRFPLQEPWAVGVKRMSKS
PSLNGIITPTSRLSFTPSPPTHPLSISPTRTAAPLLSLPSCSSILSMEDFDRLENRRPSS
SSVRRSSVEGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400080785
Transcript Infomation

pacid=37455118 locus=PGSC0003DMG400031465 ID=PGSC0003DMT400080785.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTTCACAGTTTTAAAAAGTAAGAAGAAGAAGTCTGAACAGAGTATTCACATC
AAACGTGTGAATCCTCAGGAACATTCTCCTACTGCATTGCCCGAGCCTCAAGTGCAGACA
CGGTCGTTGCAGTCGGCACCTCCAAGTTTTAGAACTAGAGTAAAACCTGTACAGTCGAGT
AATAGAGTTACAAGCAGTAGGGCGCGGGCACTCTCTGCCCCATCTAGCCTGGACTCAGCA
GAACAAGATGTAGCATCAAATGAATGTGAGGAACATGATGAGTTCAAGAGTCGTATTGGT
TCAATCAAGGAGTACCAATCACCAAGTCCTCAGCCTCTTCCTCTTCCATCTCCACAGAGT
GCCGCTGCCACTCTCAAGACTATGGGAAGCTTTAAAGTTGGCAATGCCAGCGGTCCTTTA
AATGCCTCTGGACCCCTGCCACTGCCTCCTACACTGCCTTCAACATTGCCTTCTACTGGA
GCACTCAGGAACTTCTCATTTGAAGAACTTGCTGCTGCCTGCCACCGCTTCTCACCTGAA
CGGTGTATGTCAGAAGGTCTCTCTTCTGTTATTTACAGAGCTTCTTTTGGAGATGATGCA
ACTGGTACAAAGAAGCTTGAAGCCACTGTAACCCGGCTTCATCCTTCTTCGCAGGGGTTG
AAGGAATTTGTGACTGAGGTGAACACACTAGCTTCTTTGCAACATCCATCACTTTGTAAA
CTGATTGGTTTCCATGCACGGGAAGGTTCCGAGCACAGAATGTTGGTTTATGAAAGGCTT
TTTCATGGAAGCTTAGACCGGCTTTTGTTTGGGAGGTCAGATGGTCCACCGATAGACTGG
AATGCTCGAACGAAAATTGCTTTATGTGCTGCTCAAGGTCTCACATTCCTGCATGAGGAA
GGACCTTTTCAGGCAATGTTCCATGAATTTTCCACTGCAAATATACAAATTGATAAGGAT
TGCAGTGCAAAGCTCTCGGGATATGGATGCATTACTCATATACAAGAGACAGACATATCA
TGCAGTTCAGCTGCCCTGGCAAATCTCTCTGAGGAGACTCTGGAGCGAGGATTGGTAACT
CCGAAGAGCAATGTTTGGAGTTTTGGGATTGTTCTTCTTGAGCTGCTGACTGGCCGGAAG
AATTTTGACAGTCGGCATCCAAAGGAAGAGAGGAATTTAGTGAAGTGGAGCAGGCCTTTC
CTAGCTGATGACGGTAGATTATCGCTAATCATGGACCCTCAGTTAAAAGGTCGGTTCCCT
GCCAAAGCAGCAAGAACAGTGGCTGATATTGCTCAAAGATGTCTGCAAAAGGATCCATCT
GAAAGGCCCACCATGAGAACTGTAGTGGAGCAACTCAAGGCTGTACAAGTGATGAAGTAC
CCTTCTAGGTTTCCTCTTCAAGAGCCATGGGCAGTTGGTGTAAAACGCATGTCAAAGTCT
CCGAGCCTAAATGGAATCATTACCCCAACATCAAGATTGAGCTTCACCCCTTCACCACCA
ACCCACCCTTTATCTATTTCTCCGACAAGGACAGCTGCTCCACTGCTGTCTCTACCTTCA
TGTTCCTCCATCCTCTCTATGGAGGACTTTGATCGATTGGAAAACCGAAGGCCATCATCT
TCATCTGTTCGGAGGTCTAGTGTCGAAGGATTTTGA