Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080690
CDS Infomation

pacid=37456846 polypeptide=PGSC0003DMP400054719 locus=PGSC0003DMG400031423 ID=PGSC0003DMT400080690.v4.03 annot-version=v4.03
Sequence

ATGATAATAGACTTAGAGTTTTCTACTTCTCTACTCATTTGCCTTCTTCCATTCCTTTTA
ATCCTCTTCATTAATCTTTTCAATTCCAAATCAACCAAAATCCCAAAATCTTATCCAATC
ATTGGTTCCTATTTCTCAATTTTAGCAAACAAACATCGTCGGATTCAATGGACTTCTGAT
GTAATTCAAACAACTACCAATCTTACTTTCACTCTCATTCGTCCTTTCGGTTTTCGCCAA
ATCTTTACTGCAAATCCATCCAATGTTCAATACATACTCAAAACTCATTTTCATATTTAT
CAAAAAGGTCATGTGTTTAAATCAACCATGGCTGATTTTCTTGGTGATGGTATTTTTAAT
GTGGATGGTGAAATTTGGAAGTACCAACGACAAGTTGCTAGTCATGAATTCAATACGAAG
TCTCTACGAAAATTCGTTGAAACTGTCGTCGATACTGAACTTAATGAACGTCTGATTCCA
TTTCTTGCGGTTGCTGCTGCTGAGAAAAAAGTTGTTGATTTCCAAGATATATTACAGAGG
TTTGCTTTCGATAACATTTGTAAAATTGCGTTTGGATATGATCCTGCTTATTTATTGCCA
TCTCTACCACAAGCGAAATTCGCAGTTGCTTTCGAAGAAGCTGTTAAATTAAGCAGTGAA
AGATTCAATGCTATTTTACCTTTTTTATGGAAAATCAAAAGACATTTCAATTTCGGAACT
GAGAAGAAATTCAAAATCGCTGTAGATGAAGTTCGTCAATTCGCAAAACAGCTTGTTAAA
GAAAAACAGAGAGAATTAAATGAAAAATCATCTCTCGATTCAGTAGATCTATTATCCAGA
TTCTTAAGCGTTGGCCATACAGACGAAGATTTCGTTACAGATATAGTTATTAGTTTCATA
TTAGCTGGTCGTGACACAACATCAGCTGCATTAACTTGGTTCTTCTGGTTAATCTCTGAA
CACCCAGTGGTAGAAAGCTCTATTCTCAACGAAATCAAATCAAAATCCGAAAGTCCAGTA
TACAACGAAGTTAAGGAGATGATATACACACACGCTTCACTTTGCGAAAGCATGAGGTTT
TACCCACCAGTACCAATTGATTCAAAAACAGCTACAGAGGACAATGTTTTACCAGATGGA
ACTTTTGTTAAAAAGGGGACAAGAGTAAGTTATCATCCCTACGCAATGGGGAGAGCAGAC
AAATTATGGGGAAAAGATTGGGACAAATTTAAACCAGAAAGGTGGTTGGATAGGGATGAA
GTTACTGGAAATTGGAATTTTGTTACTAAAGACATGTATACATATCCTGTTTTTCAGGCC
GGGCCAAGGATTTGTTTGGGGAAAGAAATGGCGTTTTTGCAAATGAAGAGGGTGGTGGCT
GGTGTTTTACGGCGGTTCAAGGTGGTTCCGGTGACGGAAAAAGGGGTGGAACCGGTGTTT
ATTTCATACCTCACGGCGAAAATGAAAGGTGGTTTCCATGTGACAATTGAGGAAAGGGAC
CATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400054719
PEP Infomation

pacid=37456846 transcript=PGSC0003DMT400080690 locus=PGSC0003DMG400031423 ID=PGSC0003DMT400080690.v4.03 annot-version=v4.03
Sequence

MIIDLEFSTSLLICLLPFLLILFINLFNSKSTKIPKSYPIIGSYFSILANKHRRIQWTSD
VIQTTTNLTFTLIRPFGFRQIFTANPSNVQYILKTHFHIYQKGHVFKSTMADFLGDGIFN
VDGEIWKYQRQVASHEFNTKSLRKFVETVVDTELNERLIPFLAVAAAEKKVVDFQDILQR
FAFDNICKIAFGYDPAYLLPSLPQAKFAVAFEEAVKLSSERFNAILPFLWKIKRHFNFGT
EKKFKIAVDEVRQFAKQLVKEKQRELNEKSSLDSVDLLSRFLSVGHTDEDFVTDIVISFI
LAGRDTTSAALTWFFWLISEHPVVESSILNEIKSKSESPVYNEVKEMIYTHASLCESMRF
YPPVPIDSKTATEDNVLPDGTFVKKGTRVSYHPYAMGRADKLWGKDWDKFKPERWLDRDE
VTGNWNFVTKDMYTYPVFQAGPRICLGKEMAFLQMKRVVAGVLRRFKVVPVTEKGVEPVF
ISYLTAKMKGGFHVTIEERDH*

Transcript Sequence

Transcript ID

PGSC0003DMT400080690
Transcript Infomation

pacid=37456846 locus=PGSC0003DMG400031423 ID=PGSC0003DMT400080690.v4.03 annot-version=v4.03
Sequence

ATGATAATAGACTTAGAGTTTTCTACTTCTCTACTCATTTGCCTTCTTCCATTCCTTTTA
ATCCTCTTCATTAATCTTTTCAATTCCAAATCAACCAAAATCCCAAAATCTTATCCAATC
ATTGGTTCCTATTTCTCAATTTTAGCAAACAAACATCGTCGGATTCAATGGACTTCTGAT
GTAATTCAAACAACTACCAATCTTACTTTCACTCTCATTCGTCCTTTCGGTTTTCGCCAA
ATCTTTACTGCAAATCCATCCAATGTTCAATACATACTCAAAACTCATTTTCATATTTAT
CAAAAAGGTCATGTGTTTAAATCAACCATGGCTGATTTTCTTGGTGATGGTATTTTTAAT
GTGGATGGTGAAATTTGGAAGTACCAACGACAAGTTGCTAGTCATGAATTCAATACGAAG
TCTCTACGAAAATTCGTTGAAACTGTCGTCGATACTGAACTTAATGAACGTCTGATTCCA
TTTCTTGCGGTTGCTGCTGCTGAGAAAAAAGTTGTTGATTTCCAAGATATATTACAGAGG
TTTGCTTTCGATAACATTTGTAAAATTGCGTTTGGATATGATCCTGCTTATTTATTGCCA
TCTCTACCACAAGCGAAATTCGCAGTTGCTTTCGAAGAAGCTGTTAAATTAAGCAGTGAA
AGATTCAATGCTATTTTACCTTTTTTATGGAAAATCAAAAGACATTTCAATTTCGGAACT
GAGAAGAAATTCAAAATCGCTGTAGATGAAGTTCGTCAATTCGCAAAACAGCTTGTTAAA
GAAAAACAGAGAGAATTAAATGAAAAATCATCTCTCGATTCAGTAGATCTATTATCCAGA
TTCTTAAGCGTTGGCCATACAGACGAAGATTTCGTTACAGATATAGTTATTAGTTTCATA
TTAGCTGGTCGTGACACAACATCAGCTGCATTAACTTGGTTCTTCTGGTTAATCTCTGAA
CACCCAGTGGTAGAAAGCTCTATTCTCAACGAAATCAAATCAAAATCCGAAAGTCCAGTA
TACAACGAAGTTAAGGAGATGATATACACACACGCTTCACTTTGCGAAAGCATGAGGTTT
TACCCACCAGTACCAATTGATTCAAAAACAGCTACAGAGGACAATGTTTTACCAGATGGA
ACTTTTGTTAAAAAGGGGACAAGAGTAAGTTATCATCCCTACGCAATGGGGAGAGCAGAC
AAATTATGGGGAAAAGATTGGGACAAATTTAAACCAGAAAGGTGGTTGGATAGGGATGAA
GTTACTGGAAATTGGAATTTTGTTACTAAAGACATGTATACATATCCTGTTTTTCAGGCC
GGGCCAAGGATTTGTTTGGGGAAAGAAATGGCGTTTTTGCAAATGAAGAGGGTGGTGGCT
GGTGTTTTACGGCGGTTCAAGGTGGTTCCGGTGACGGAAAAAGGGGTGGAACCGGTGTTT
ATTTCATACCTCACGGCGAAAATGAAAGGTGGTTTCCATGTGACAATTGAGGAAAGGGAC
CATTAG