Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080649
CDS Infomation

pacid=37480385 polypeptide=PGSC0003DMP400054698 locus=PGSC0003DMG400031405 ID=PGSC0003DMT400080649.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGTAGCAGTAGAATTTCTCGTTGAGAACTTGATGCAGCTGCTGCGGGACAAC
GCAGAGCTAATTAGTGGAGTTAAAGAGGCTGCTGAGAGTCTACTTCAAGATCTAAATGAT
TTCAACGCCTTTCTTAAGCAAGCTGCCAAGTGCCACATCAACGAGAACGAAGTTCTGAGA
GAACTCGTCAAGAAAATCAGAACAGTGGTTAACTCTGCTGAAGATGCTATTGATAAATTT
GTGATTGAAGCTAAGCTACACAAGGATAAGGGTATGACCAGAGTATTAGACCTTCCCCAT
TATAAAAGAGTCAGGGAGGTAGCTGGTGAGATCAAAGCTATACGAAACAAAGTCAAAGAG
ATCAGACAGAATGATGCCATTGGACTTCAGGCCCTTCAAGATGATGATTCATCTGCCAGA
GGTTTCGAAGAAAGAAAGCCTCCAGTGGTAGAGGAAGATGATGTGGTTGGATTTGACGAA
GAAGCAGATATTGTAATCAAACGCCTTCTTGGAGAATCAAATCGTCTAGAAGTTGTTCCA
GTTGTTGGTATGCCTGGTCTCGGCAAAACGACCCTAGCAAATAAAATATACAAGCATCCT
AAAATCGGGTATGAATTTTTTACTCGTATTTGGGTTTATGTATCTCAATCATACAGGAGA
AGAGAATTATTTCTCAACATCATCAGCAAATTCACTCGAAATACGAAACAATATCATGGG
ATGTGTGAGGAGGATTTGGCTGATGAAATACAAGAATTCTTGGGAAAGGGAGGAAAATAC
TTGGTTGTCTTGGATGATGTATGGTCGGATGAAGCTTGGGAACGTATCAAGATAGCTTTC
CCAAATAACAACAAACCGAATCGAGTATTGTTGACCACTCGAGATTCCAAAGTGGCTAAA
CAATGCACTCCCATACCTCATGATTTAAAATTTCTGAGTGAAGATGAAAGTTGGATATTA
CTGGAGAAGAAGGTTTTTCACAAGGATAAATGTCCTCCTGAATTGGTGGTACCATCTGGG
AAGAGCATAGCAAAAAAATGTAAGGGACTACCCCTTGCGATTGTTGTTATCGCAGGAGCA
CTAATAGGGAAAGGCAAGACACCAAGAGAGTGGAAACAAGTGGATGATAGTGTGAGTGAA
CACCTCATAAATAGAGACCACCCTGAGAATTGTAACAAACTGGTGCAAATGAGTTATGAT
CGTTTACCTTACGACTTGAAAGCGTGCTTTTTATATTGTAGTGCATTTCCCGGAGGCTTT
CAAATCCCTGCTTGGAAGTTAATCCGTTTGTGGATTGCAGAAGGTTTCATACAGTATAAA
GGCCACTTATCTCTTGAGTGTAAAGGAGAGGACAACTTGAATGATCTCATCAACAGGAAT
CTAGTGATGGTAATGGAAAGAACGTCTGATGGTCAAATCAAAACATGTCGTCTTCATGAC
ATGTTGCACGAGTTTTGCAGGCAAGAAGCTATGAAGGAAGAAAATCTTTTCCAAGAAATA
AAGCTAGGATCTGAGCAATATTTTCCTGGAAAACGAGAACTATCCACGTACCGTCGCTTA
TGCATTCATTCCTCAGTTTTGGATTTTATCTCTACGAAACCTTCAGCTGAACATGTGAGG
TCATTCTTATCTTTTTCTTCAAAAAAGATTGAGATGCCATCTGCTGACATCCCAACCATA
CCAAAAGGCTTTCCGTTGCTAAGAGTTTTGGATGTAGAATCCATCAACTTCAGTCGCTTT
TCCAAGGAGTTTTACCAGTTATATCATTTGAGGTATGTTGCTTTTTCATCTGACTCAATC
AAGATTCTTCCTAAACTCATGGGAGAACTTTGGAACATCCAAACCATCATAATTAACACG
CAACAACGCACTCTTGATATTCAAGCAAATATATGGAATATGGAACGACTAAGGCATCTG
CACACTAACTCTTCTGCTAAATTGCCTGTCCCTGTTGCTCCAAAAAATAGTAAAGTTACA
TTGGTAAATCAAAGCCTGCAAACTCTCTCCACAATAGCTCCCGAAAGCTGCACTGAAGAA
GTGTTTGCAAGGACTCCAAACCTGAAAAAGCTGGGCATCCGTGGGAAAATAGCTGTGCTT
CTTGATAATAAGTCTGCTGTGTCGTTAAAAAATGTGAAGAGGCTAGAATACCTTGAAAAC
TTGAAGCTGATAAATGATAGTAGCATTCAAACAGGAAAGTTACGCCTTCCACCTGCATAC
ATATTTCCAACAAAGTTGAGGAAGCTGACTTTATTAGACACCTGGTTGGAGTGGAAAGAT
ATGTCTATATTGGGTCAGTTGGAACACCTTGAAGTCCTGAAGATGAAAGAAAATGGGTTT
ACGGGAGAGTCCTGGGAGTCTACTGGTGGTTTTTGTTCCCTACTGGTGTTGTGGATTGAA
AGGACAAACTTAGTTACTTGGAAAGCATCAGCTGATGACTTTCCAAGACTTAAGCATCTT
GTTCTCATCTGCTGTGATTACCTTAAGGAAGTCCCCATCGCCCTAGCTGATATACGCAGT
TTCCAAGTCATGATGTTGCAAAATTCCACCAAAACAGCAGCAATATCTGCACGTCAAATA
CAAGCCAAAAAAGACAATCAAACTCAACAAGGGACTAAAAACATTGCCTTCAAGCTTTCC
ATATTCCCTCCTGATCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054698
PEP Infomation

pacid=37480385 transcript=PGSC0003DMT400080649 locus=PGSC0003DMG400031405 ID=PGSC0003DMT400080649.v4.03 annot-version=v4.03
Sequence

MANVAVEFLVENLMQLLRDNAELISGVKEAAESLLQDLNDFNAFLKQAAKCHINENEVLR
ELVKKIRTVVNSAEDAIDKFVIEAKLHKDKGMTRVLDLPHYKRVREVAGEIKAIRNKVKE
IRQNDAIGLQALQDDDSSARGFEERKPPVVEEDDVVGFDEEADIVIKRLLGESNRLEVVP
VVGMPGLGKTTLANKIYKHPKIGYEFFTRIWVYVSQSYRRRELFLNIISKFTRNTKQYHG
MCEEDLADEIQEFLGKGGKYLVVLDDVWSDEAWERIKIAFPNNNKPNRVLLTTRDSKVAK
QCTPIPHDLKFLSEDESWILLEKKVFHKDKCPPELVVPSGKSIAKKCKGLPLAIVVIAGA
LIGKGKTPREWKQVDDSVSEHLINRDHPENCNKLVQMSYDRLPYDLKACFLYCSAFPGGF
QIPAWKLIRLWIAEGFIQYKGHLSLECKGEDNLNDLINRNLVMVMERTSDGQIKTCRLHD
MLHEFCRQEAMKEENLFQEIKLGSEQYFPGKRELSTYRRLCIHSSVLDFISTKPSAEHVR
SFLSFSSKKIEMPSADIPTIPKGFPLLRVLDVESINFSRFSKEFYQLYHLRYVAFSSDSI
KILPKLMGELWNIQTIIINTQQRTLDIQANIWNMERLRHLHTNSSAKLPVPVAPKNSKVT
LVNQSLQTLSTIAPESCTEEVFARTPNLKKLGIRGKIAVLLDNKSAVSLKNVKRLEYLEN
LKLINDSSIQTGKLRLPPAYIFPTKLRKLTLLDTWLEWKDMSILGQLEHLEVLKMKENGF
TGESWESTGGFCSLLVLWIERTNLVTWKASADDFPRLKHLVLICCDYLKEVPIALADIRS
FQVMMLQNSTKTAAISARQIQAKKDNQTQQGTKNIAFKLSIFPPDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400080649
Transcript Infomation

pacid=37480385 locus=PGSC0003DMG400031405 ID=PGSC0003DMT400080649.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGTAGCAGTAGAATTTCTCGTTGAGAACTTGATGCAGCTGCTGCGGGACAAC
GCAGAGCTAATTAGTGGAGTTAAAGAGGCTGCTGAGAGTCTACTTCAAGATCTAAATGAT
TTCAACGCCTTTCTTAAGCAAGCTGCCAAGTGCCACATCAACGAGAACGAAGTTCTGAGA
GAACTCGTCAAGAAAATCAGAACAGTGGTTAACTCTGCTGAAGATGCTATTGATAAATTT
GTGATTGAAGCTAAGCTACACAAGGATAAGGGTATGACCAGAGTATTAGACCTTCCCCAT
TATAAAAGAGTCAGGGAGGTAGCTGGTGAGATCAAAGCTATACGAAACAAAGTCAAAGAG
ATCAGACAGAATGATGCCATTGGACTTCAGGCCCTTCAAGATGATGATTCATCTGCCAGA
GGTTTCGAAGAAAGAAAGCCTCCAGTGGTAGAGGAAGATGATGTGGTTGGATTTGACGAA
GAAGCAGATATTGTAATCAAACGCCTTCTTGGAGAATCAAATCGTCTAGAAGTTGTTCCA
GTTGTTGGTATGCCTGGTCTCGGCAAAACGACCCTAGCAAATAAAATATACAAGCATCCT
AAAATCGGGTATGAATTTTTTACTCGTATTTGGGTTTATGTATCTCAATCATACAGGAGA
AGAGAATTATTTCTCAACATCATCAGCAAATTCACTCGAAATACGAAACAATATCATGGG
ATGTGTGAGGAGGATTTGGCTGATGAAATACAAGAATTCTTGGGAAAGGGAGGAAAATAC
TTGGTTGTCTTGGATGATGTATGGTCGGATGAAGCTTGGGAACGTATCAAGATAGCTTTC
CCAAATAACAACAAACCGAATCGAGTATTGTTGACCACTCGAGATTCCAAAGTGGCTAAA
CAATGCACTCCCATACCTCATGATTTAAAATTTCTGAGTGAAGATGAAAGTTGGATATTA
CTGGAGAAGAAGGTTTTTCACAAGGATAAATGTCCTCCTGAATTGGTGGTACCATCTGGG
AAGAGCATAGCAAAAAAATGTAAGGGACTACCCCTTGCGATTGTTGTTATCGCAGGAGCA
CTAATAGGGAAAGGCAAGACACCAAGAGAGTGGAAACAAGTGGATGATAGTGTGAGTGAA
CACCTCATAAATAGAGACCACCCTGAGAATTGTAACAAACTGGTGCAAATGAGTTATGAT
CGTTTACCTTACGACTTGAAAGCGTGCTTTTTATATTGTAGTGCATTTCCCGGAGGCTTT
CAAATCCCTGCTTGGAAGTTAATCCGTTTGTGGATTGCAGAAGGTTTCATACAGTATAAA
GGCCACTTATCTCTTGAGTGTAAAGGAGAGGACAACTTGAATGATCTCATCAACAGGAAT
CTAGTGATGGTAATGGAAAGAACGTCTGATGGTCAAATCAAAACATGTCGTCTTCATGAC
ATGTTGCACGAGTTTTGCAGGCAAGAAGCTATGAAGGAAGAAAATCTTTTCCAAGAAATA
AAGCTAGGATCTGAGCAATATTTTCCTGGAAAACGAGAACTATCCACGTACCGTCGCTTA
TGCATTCATTCCTCAGTTTTGGATTTTATCTCTACGAAACCTTCAGCTGAACATGTGAGG
TCATTCTTATCTTTTTCTTCAAAAAAGATTGAGATGCCATCTGCTGACATCCCAACCATA
CCAAAAGGCTTTCCGTTGCTAAGAGTTTTGGATGTAGAATCCATCAACTTCAGTCGCTTT
TCCAAGGAGTTTTACCAGTTATATCATTTGAGGTATGTTGCTTTTTCATCTGACTCAATC
AAGATTCTTCCTAAACTCATGGGAGAACTTTGGAACATCCAAACCATCATAATTAACACG
CAACAACGCACTCTTGATATTCAAGCAAATATATGGAATATGGAACGACTAAGGCATCTG
CACACTAACTCTTCTGCTAAATTGCCTGTCCCTGTTGCTCCAAAAAATAGTAAAGTTACA
TTGGTAAATCAAAGCCTGCAAACTCTCTCCACAATAGCTCCCGAAAGCTGCACTGAAGAA
GTGTTTGCAAGGACTCCAAACCTGAAAAAGCTGGGCATCCGTGGGAAAATAGCTGTGCTT
CTTGATAATAAGTCTGCTGTGTCGTTAAAAAATGTGAAGAGGCTAGAATACCTTGAAAAC
TTGAAGCTGATAAATGATAGTAGCATTCAAACAGGAAAGTTACGCCTTCCACCTGCATAC
ATATTTCCAACAAAGTTGAGGAAGCTGACTTTATTAGACACCTGGTTGGAGTGGAAAGAT
ATGTCTATATTGGGTCAGTTGGAACACCTTGAAGTCCTGAAGATGAAAGAAAATGGGTTT
ACGGGAGAGTCCTGGGAGTCTACTGGTGGTTTTTGTTCCCTACTGGTGTTGTGGATTGAA
AGGACAAACTTAGTTACTTGGAAAGCATCAGCTGATGACTTTCCAAGACTTAAGCATCTT
GTTCTCATCTGCTGTGATTACCTTAAGGAAGTCCCCATCGCCCTAGCTGATATACGCAGT
TTCCAAGTCATGATGTTGCAAAATTCCACCAAAACAGCAGCAATATCTGCACGTCAAATA
CAAGCCAAAAAAGACAATCAAACTCAACAAGGGACTAAAAACATTGCCTTCAAGCTTTCC
ATATTCCCTCCTGATCTCTGA