Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080614
CDS Infomation

pacid=37447368 polypeptide=PGSC0003DMP400054678 locus=PGSC0003DMG400031391 ID=PGSC0003DMT400080614.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTATTTTAACTGCATCCTCTGGTCCAAGCTATGCACCAGAAGACCCTACTCTC
CCCAAACCTTGGAAAGGCCTAGTTGATGGTACAACTGGATATATCTACTTCTGGAACCCA
GAGACCAATGATACCCAATATGAGAAGCCTGTTCACTCATCCAATGGAGTGTCTGCTCCA
GCACAAAAGTCAGCTGTATTTGTTAGTTCATCTGTTCAAAAACCCTCTCAAGGTCAACAT
TATGATCCAGACGGTAGGCATAGCAGAGGTAGCAACAACAAGGTTACATCCCTGAAGGGA
GATCAGAATGTGAGAAGCAGTTCAGATCATCACGAAGGCTATGATTCTCTAGGTGTAGGA
ACTGACATATCTCAGGAATCCTATTGCCGCCATAATGAGATCTCTGTTATGGGAGGTGAT
GTTCCTGCACCTTTGACATCATTTGAAGCGACTGGGTTTCCTTCAGAGATTGTGAGGGAG
ATGCATCAGGCTGGGTTTTCTGCTCCTACTCCAATTCAGGCACAATCTTGGCCCGTTGCC
CTTCAGGGCCGTGACATAGTAGCCATTGCGAAGACTGGGTCTGGGAAAACTTTGGGTTAC
TTGATTCCGGGATTTATTCATCTAAAAAATCGTCGCAGTAATCCTCAATTAGGCCCAACT
ATTTTGGTGCTCTCACCAACAAGAGAGTTAGCCACGCAGATACAAGCTGAAGCTGTGAAG
TTTGGGAAATCCTCTAGGATATCTTGCACGTGCCTGTATGGAGGTGCTCCAAAAGGTCCT
CAACTCCGAGAGCTGAGTAGGGGTGTAGATATTGTTGTCGCCACTCCTGGTCGTTTGAAT
GACATATTGGAAATGAGAAGGCTTAGTCTTGGTCAAGTTTCTTACCTGGTGTTAGATGAA
GCAGATCGTATGCTAGACATGGGATTTGAACCTCAGATAAGAAAGATTGTGAAAGAGGTG
CCTACGCAGAGGCAGACATTGATGTATACAGCTACATGGCCGAAGGGGGTTCGTAAGATT
GCAGCTGATCTATTGGTTAATTCAGTTCAGGTTAATATTGGTAATGTTGACGAGCTTGTT
GCAAACAAGTCTATAACACAGCACATTGAAGTCTTGTCTCCGATGGAGAAACAACGGCGA
CTAGAACAAATCTTGAGATCCAATGAACCAGGGTCAAAGATCATTATCTTCTGTTCAACA
AAGAAAATGTGTGACCAACTATCTCGCAATCTTACTCGCAACTTTGGAGCAGCTGCAATT
CATGGGGATAAATCTCAGGGTGAGAGGGATTATGTATTAAGTCAGTTCCGCACTGGCAGG
TCTCCTGTGCTTGTGGCTACTGATGTTGCTGCGCGGGGTTTAGACATCAAAGATATCAGG
GTGGTGGTAAACTTTGACTTCCCAACTGGAATAGAGGATTATGTCCACAGAATTGGTAGG
ACAGGTCGGGCAGGGGCATCTGGTCTGGCCTATACATTTTTCTCCGATCAGGATGCTAAG
CATGCTTTAGATCTTGTTAAAGTTTTAGAAGGTGCAAATCAATCTGTGCCAACTGAACTG
CGTGATATGGTTTCACGAGGTGGTGGTATGGGAAAGGCTAGGTGGGGTTCTGGTCAAGGT
GGACGCGGTGGGCGCTTCAATGGAAGCTATGTTGGTCGGAATGGAGGAAGGGGAGGAGGC
TGGAATAATTCATCATCAGAAAGAGGCGGAGGACGTGGTTATGACCGGGGATCACGTGAT
AGTGACAGATATCTCAATGCGGATGCTCCAAGGAAGCGTAGTCGCAGCAGAAGTCCCAAC
AAGGGTTCAGGATGGAGTGATAAAAAGAGCCGGTTTACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054678
PEP Infomation

pacid=37447368 transcript=PGSC0003DMT400080614 locus=PGSC0003DMG400031391 ID=PGSC0003DMT400080614.v4.03 annot-version=v4.03
Sequence

MAAILTASSGPSYAPEDPTLPKPWKGLVDGTTGYIYFWNPETNDTQYEKPVHSSNGVSAP
AQKSAVFVSSSVQKPSQGQHYDPDGRHSRGSNNKVTSLKGDQNVRSSSDHHEGYDSLGVG
TDISQESYCRHNEISVMGGDVPAPLTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPVA
LQGRDIVAIAKTGSGKTLGYLIPGFIHLKNRRSNPQLGPTILVLSPTRELATQIQAEAVK
FGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRLSLGQVSYLVLDE
ADRMLDMGFEPQIRKIVKEVPTQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELV
ANKSITQHIEVLSPMEKQRRLEQILRSNEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAI
HGDKSQGERDYVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNFDFPTGIEDYVHRIGR
TGRAGASGLAYTFFSDQDAKHALDLVKVLEGANQSVPTELRDMVSRGGGMGKARWGSGQG
GRGGRFNGSYVGRNGGRGGGWNNSSSERGGGRGYDRGSRDSDRYLNADAPRKRSRSRSPN
KGSGWSDKKSRFT*

Transcript Sequence

Transcript ID

PGSC0003DMT400080614
Transcript Infomation

pacid=37447368 locus=PGSC0003DMG400031391 ID=PGSC0003DMT400080614.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTATTTTAACTGCATCCTCTGGTCCAAGCTATGCACCAGAAGACCCTACTCTC
CCCAAACCTTGGAAAGGCCTAGTTGATGGTACAACTGGATATATCTACTTCTGGAACCCA
GAGACCAATGATACCCAATATGAGAAGCCTGTTCACTCATCCAATGGAGTGTCTGCTCCA
GCACAAAAGTCAGCTGTATTTGTTAGTTCATCTGTTCAAAAACCCTCTCAAGGTCAACAT
TATGATCCAGACGGTAGGCATAGCAGAGGTAGCAACAACAAGGTTACATCCCTGAAGGGA
GATCAGAATGTGAGAAGCAGTTCAGATCATCACGAAGGCTATGATTCTCTAGGTGTAGGA
ACTGACATATCTCAGGAATCCTATTGCCGCCATAATGAGATCTCTGTTATGGGAGGTGAT
GTTCCTGCACCTTTGACATCATTTGAAGCGACTGGGTTTCCTTCAGAGATTGTGAGGGAG
ATGCATCAGGCTGGGTTTTCTGCTCCTACTCCAATTCAGGCACAATCTTGGCCCGTTGCC
CTTCAGGGCCGTGACATAGTAGCCATTGCGAAGACTGGGTCTGGGAAAACTTTGGGTTAC
TTGATTCCGGGATTTATTCATCTAAAAAATCGTCGCAGTAATCCTCAATTAGGCCCAACT
ATTTTGGTGCTCTCACCAACAAGAGAGTTAGCCACGCAGATACAAGCTGAAGCTGTGAAG
TTTGGGAAATCCTCTAGGATATCTTGCACGTGCCTGTATGGAGGTGCTCCAAAAGGTCCT
CAACTCCGAGAGCTGAGTAGGGGTGTAGATATTGTTGTCGCCACTCCTGGTCGTTTGAAT
GACATATTGGAAATGAGAAGGCTTAGTCTTGGTCAAGTTTCTTACCTGGTGTTAGATGAA
GCAGATCGTATGCTAGACATGGGATTTGAACCTCAGATAAGAAAGATTGTGAAAGAGGTG
CCTACGCAGAGGCAGACATTGATGTATACAGCTACATGGCCGAAGGGGGTTCGTAAGATT
GCAGCTGATCTATTGGTTAATTCAGTTCAGGTTAATATTGGTAATGTTGACGAGCTTGTT
GCAAACAAGTCTATAACACAGCACATTGAAGTCTTGTCTCCGATGGAGAAACAACGGCGA
CTAGAACAAATCTTGAGATCCAATGAACCAGGGTCAAAGATCATTATCTTCTGTTCAACA
AAGAAAATGTGTGACCAACTATCTCGCAATCTTACTCGCAACTTTGGAGCAGCTGCAATT
CATGGGGATAAATCTCAGGGTGAGAGGGATTATGTATTAAGTCAGTTCCGCACTGGCAGG
TCTCCTGTGCTTGTGGCTACTGATGTTGCTGCGCGGGGTTTAGACATCAAAGATATCAGG
GTGGTGGTAAACTTTGACTTCCCAACTGGAATAGAGGATTATGTCCACAGAATTGGTAGG
ACAGGTCGGGCAGGGGCATCTGGTCTGGCCTATACATTTTTCTCCGATCAGGATGCTAAG
CATGCTTTAGATCTTGTTAAAGTTTTAGAAGGTGCAAATCAATCTGTGCCAACTGAACTG
CGTGATATGGTTTCACGAGGTGGTGGTATGGGAAAGGCTAGGTGGGGTTCTGGTCAAGGT
GGACGCGGTGGGCGCTTCAATGGAAGCTATGTTGGTCGGAATGGAGGAAGGGGAGGAGGC
TGGAATAATTCATCATCAGAAAGAGGCGGAGGACGTGGTTATGACCGGGGATCACGTGAT
AGTGACAGATATCTCAATGCGGATGCTCCAAGGAAGCGTAGTCGCAGCAGAAGTCCCAAC
AAGGGTTCAGGATGGAGTGATAAAAAGAGCCGGTTTACCTGA