Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080581
CDS Infomation

pacid=37447136 polypeptide=PGSC0003DMP400054654 locus=PGSC0003DMG401031379 ID=PGSC0003DMT400080581.v4.03 annot-version=v4.03
Sequence

ATGAGTGTGGTTGGTTTTGACTTCGGCAATGAAAGTGGCGTTGTTGCGGTTGCTAGGCAG
CGAGGAATTGATGTTGTACTTAATGACGAATCAAAAAGGGAAACTCCAGCTATAGTCTGC
TTTGGAGAGAAGCAGCGATTTCTTGGTACTGCTGGCGCAGCGTCAAGCATGATGAATCCA
AAGAATACCATTTCGCAGATAAAGAGGCTAATAGGGCGACAATTTTCAGATCCTGAGCTG
CAAAAAGATCTTAAGGCACTGCCCTTCTTAGTAACTGAAGGGCCCGATGGATATCCCCTG
ATCCATGCGCACTATTTGGGGGAAATGAGAACTTTTACCCCTACCCAGGTTGTTGGAATG
GTGTTTTCGGATCTGAAGACTATAGCAGAGAAGAATCTCAATGCAGCAGTAGTTGATTGT
TGCATTGGAATCCCAGTTTATTTCACTGATCTTCAGAGGAGAGCTGTAATGGACGCAGCC
ACCATTGCTGGCTTGCATCCTTTGCATCTAATTCACGAGACAACAGCTACTGCATTAGCG
TATGGTATTTACAAGACGGATTTACCTGAAAATGACCAATTGAATGTTGCTTTTGTGGAT
GTTGGGCATGCAAGCTTGCAAGTTTGTATTGCTGGCTTCAAGAAAGGCCAATTGAAGATA
TTGGCTCATTCATTTGACAGAAATCTTGGTGGGAGGGATTTTGATGAAGCTCTTTTCCAT
CATTTTGCTGCAAAGTTCAAGGAGGAATACAAAATTGATGTTCTCCAAAATGCTAAGGCA
TGCATTAGACTTCGAGCTGCTTGTGAAAAGTTGAAAAAGGTTCTCAGTGCAAACCCTGAG
GCACCTTTGAATATAGAGTGTTTAATGGATGAGAAGGATGTCAGAGGGTATATCAAGAGG
GATGAGTTTGAGCAAATCAGCATCCCTATACTGGAGAGAGTGAAGAAACCACTGGAGAAA
GCTCTTGCTGAAGCTGGGCTTACTACTGAGAACATTCATGCAGTTGAGGTTGTTGGGTCA
AGCTCTCGTGTGCCTGCAATTATGAGGATTTTGACAGAGTTCTTCGGTAAGGAACCAAGG
CGCACCATGAATGCAAGTGAATGTGTGGCCAAAGGCACTGCACTGCAATGCGCTATTCTC
AGCCCTACTTTTAAAGTGCGAGAATTCAAGGTCAATGAGAGCTTCCCTTTCTCAATTGCA
TTATCGTGGAAGGGGCCTTCCCCTGATGCACAAAATGGAGAGCATCATCAGAGCACAATT
GTTTTCCCCAAAGGAAATCCGATACCCAGTGTGAAAGCTCTGACATTCTACAGATCTGGC
ACATTTACAACAGATGTACAGTATGCTGATGTCAGTGAACTGCAGGCGCCAGCAAAGATC
AGTACTTACACGATTGGACCATTCCAATCTTCAAAGGGTGAAAGGGCCAAACTAAAAGTT
AAAGTACGCCTAACCCTGCATGGTATCGTCTCGGTTGAGTCCGCAACTCTTTTAGAAGAA
GAAGAGGTAGATGTCCCAGTTGTGAAAGAGACAGCTAAGGGACCTGCCAGAATGGAAACA
GATGAAGGTTCAGCTGATGCTGCTCCTTCAACTACATCGGAAAATGATGTAAATATGGAA
GATGCTAAAGGAGCTGCAGCTGCTTCAGGGGCTGAGAATGGTGTTCCAGAATCTGGAGAT
GAACCTGTCCAAATGGAGTCAGATGCTAAGGTCGAAGCCCCTAAGAAGAAGGTCAAGAAG
ACATCTGTACCAGTGACTGAGATTGTTTATGGTGCAATGGCAGCTGCTGATGTTCAGAAG
GCTGTCGAGAAAGAATTTGAAATGGCTCTTCAGGACCGTGTTATGGAAGAGACAAAGGAC
AAAAAGAATGCTGTTGAGTCCTATGTTTACGACATGAGGAATAAGCTTTCAGATAAATAT
CAAGAGTTTGTAACTGATTCAGAAAGAGAACAATTTATGGCTGTACTTCAAGAAGTGGAA
GATTGGTTGTATGATGATGGAGAGGATGAAACTAAGGGTGTTTACATCGCCAAGCTTGAG
GAGCTTAAAAAGCAAGGTGACCCGATTGAGCAACGATACAAAGAGTACACGGAGAGGGGT
CCTGTGAGTGATCAATTTATTTATTGCATAAATAGTTACAGAGAGGCGGCAGTGTCAAGT
GATCCCAAGTTTGATCACATTGATTTAGCAGAGAAGCAGAAGGTTTTGAATGAGTGTGTC
GAAGCTGAGGCTTGGTTTAGAGAGAAAAAGCAGCAGCAGGATGCTCTATCAAAATATGCC
AACCCTGTTCTTTTGTCAGCTGATGTTCGAAAGAAGGCAGAAGCACTTGATAGGGTGTGT
AGGCCTATAATGACAAAGCCTAAGCCAGCTAAGCCAGCAACTCCTGAAACACCGTCACCT
CAACCTCCTCAAGGAGGTGAGCAACAACCTCAGGGTGCAGCGAGTCCTAATGCTACTGAG
GGTGCCAGTGCTGACAGTGAAGTACCACCTGCTGGCGAGCCAATGGAGACTGACAAATCT
GAGACTTTGCCAAGTGCTTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400054654
PEP Infomation

pacid=37447136 transcript=PGSC0003DMT400080581 locus=PGSC0003DMG401031379 ID=PGSC0003DMT400080581.v4.03 annot-version=v4.03
Sequence

MSVVGFDFGNESGVVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFLGTAGAASSMMNP
KNTISQIKRLIGRQFSDPELQKDLKALPFLVTEGPDGYPLIHAHYLGEMRTFTPTQVVGM
VFSDLKTIAEKNLNAAVVDCCIGIPVYFTDLQRRAVMDAATIAGLHPLHLIHETTATALA
YGIYKTDLPENDQLNVAFVDVGHASLQVCIAGFKKGQLKILAHSFDRNLGGRDFDEALFH
HFAAKFKEEYKIDVLQNAKACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGYIKR
DEFEQISIPILERVKKPLEKALAEAGLTTENIHAVEVVGSSSRVPAIMRILTEFFGKEPR
RTMNASECVAKGTALQCAILSPTFKVREFKVNESFPFSIALSWKGPSPDAQNGEHHQSTI
VFPKGNPIPSVKALTFYRSGTFTTDVQYADVSELQAPAKISTYTIGPFQSSKGERAKLKV
KVRLTLHGIVSVESATLLEEEEVDVPVVKETAKGPARMETDEGSADAAPSTTSENDVNME
DAKGAAAASGAENGVPESGDEPVQMESDAKVEAPKKKVKKTSVPVTEIVYGAMAAADVQK
AVEKEFEMALQDRVMEETKDKKNAVESYVYDMRNKLSDKYQEFVTDSEREQFMAVLQEVE
DWLYDDGEDETKGVYIAKLEELKKQGDPIEQRYKEYTERGPVSDQFIYCINSYREAAVSS
DPKFDHIDLAEKQKVLNECVEAEAWFREKKQQQDALSKYANPVLLSADVRKKAEALDRVC
RPIMTKPKPAKPATPETPSPQPPQGGEQQPQGAASPNATEGASADSEVPPAGEPMETDKS
ETLPSAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400080581
Transcript Infomation

pacid=37447136 locus=PGSC0003DMG401031379 ID=PGSC0003DMT400080581.v4.03 annot-version=v4.03
Sequence

ATGAGTGTGGTTGGTTTTGACTTCGGCAATGAAAGTGGCGTTGTTGCGGTTGCTAGGCAG
CGAGGAATTGATGTTGTACTTAATGACGAATCAAAAAGGGAAACTCCAGCTATAGTCTGC
TTTGGAGAGAAGCAGCGATTTCTTGGTACTGCTGGCGCAGCGTCAAGCATGATGAATCCA
AAGAATACCATTTCGCAGATAAAGAGGCTAATAGGGCGACAATTTTCAGATCCTGAGCTG
CAAAAAGATCTTAAGGCACTGCCCTTCTTAGTAACTGAAGGGCCCGATGGATATCCCCTG
ATCCATGCGCACTATTTGGGGGAAATGAGAACTTTTACCCCTACCCAGGTTGTTGGAATG
GTGTTTTCGGATCTGAAGACTATAGCAGAGAAGAATCTCAATGCAGCAGTAGTTGATTGT
TGCATTGGAATCCCAGTTTATTTCACTGATCTTCAGAGGAGAGCTGTAATGGACGCAGCC
ACCATTGCTGGCTTGCATCCTTTGCATCTAATTCACGAGACAACAGCTACTGCATTAGCG
TATGGTATTTACAAGACGGATTTACCTGAAAATGACCAATTGAATGTTGCTTTTGTGGAT
GTTGGGCATGCAAGCTTGCAAGTTTGTATTGCTGGCTTCAAGAAAGGCCAATTGAAGATA
TTGGCTCATTCATTTGACAGAAATCTTGGTGGGAGGGATTTTGATGAAGCTCTTTTCCAT
CATTTTGCTGCAAAGTTCAAGGAGGAATACAAAATTGATGTTCTCCAAAATGCTAAGGCA
TGCATTAGACTTCGAGCTGCTTGTGAAAAGTTGAAAAAGGTTCTCAGTGCAAACCCTGAG
GCACCTTTGAATATAGAGTGTTTAATGGATGAGAAGGATGTCAGAGGGTATATCAAGAGG
GATGAGTTTGAGCAAATCAGCATCCCTATACTGGAGAGAGTGAAGAAACCACTGGAGAAA
GCTCTTGCTGAAGCTGGGCTTACTACTGAGAACATTCATGCAGTTGAGGTTGTTGGGTCA
AGCTCTCGTGTGCCTGCAATTATGAGGATTTTGACAGAGTTCTTCGGTAAGGAACCAAGG
CGCACCATGAATGCAAGTGAATGTGTGGCCAAAGGCACTGCACTGCAATGCGCTATTCTC
AGCCCTACTTTTAAAGTGCGAGAATTCAAGGTCAATGAGAGCTTCCCTTTCTCAATTGCA
TTATCGTGGAAGGGGCCTTCCCCTGATGCACAAAATGGAGAGCATCATCAGAGCACAATT
GTTTTCCCCAAAGGAAATCCGATACCCAGTGTGAAAGCTCTGACATTCTACAGATCTGGC
ACATTTACAACAGATGTACAGTATGCTGATGTCAGTGAACTGCAGGCGCCAGCAAAGATC
AGTACTTACACGATTGGACCATTCCAATCTTCAAAGGGTGAAAGGGCCAAACTAAAAGTT
AAAGTACGCCTAACCCTGCATGGTATCGTCTCGGTTGAGTCCGCAACTCTTTTAGAAGAA
GAAGAGGTAGATGTCCCAGTTGTGAAAGAGACAGCTAAGGGACCTGCCAGAATGGAAACA
GATGAAGGTTCAGCTGATGCTGCTCCTTCAACTACATCGGAAAATGATGTAAATATGGAA
GATGCTAAAGGAGCTGCAGCTGCTTCAGGGGCTGAGAATGGTGTTCCAGAATCTGGAGAT
GAACCTGTCCAAATGGAGTCAGATGCTAAGGTCGAAGCCCCTAAGAAGAAGGTCAAGAAG
ACATCTGTACCAGTGACTGAGATTGTTTATGGTGCAATGGCAGCTGCTGATGTTCAGAAG
GCTGTCGAGAAAGAATTTGAAATGGCTCTTCAGGACCGTGTTATGGAAGAGACAAAGGAC
AAAAAGAATGCTGTTGAGTCCTATGTTTACGACATGAGGAATAAGCTTTCAGATAAATAT
CAAGAGTTTGTAACTGATTCAGAAAGAGAACAATTTATGGCTGTACTTCAAGAAGTGGAA
GATTGGTTGTATGATGATGGAGAGGATGAAACTAAGGGTGTTTACATCGCCAAGCTTGAG
GAGCTTAAAAAGCAAGGTGACCCGATTGAGCAACGATACAAAGAGTACACGGAGAGGGGT
CCTGTGAGTGATCAATTTATTTATTGCATAAATAGTTACAGAGAGGCGGCAGTGTCAAGT
GATCCCAAGTTTGATCACATTGATTTAGCAGAGAAGCAGAAGGTTTTGAATGAGTGTGTC
GAAGCTGAGGCTTGGTTTAGAGAGAAAAAGCAGCAGCAGGATGCTCTATCAAAATATGCC
AACCCTGTTCTTTTGTCAGCTGATGTTCGAAAGAAGGCAGAAGCACTTGATAGGGTGTGT
AGGCCTATAATGACAAAGCCTAAGCCAGCTAAGCCAGCAACTCCTGAAACACCGTCACCT
CAACCTCCTCAAGGAGGTGAGCAACAACCTCAGGGTGCAGCGAGTCCTAATGCTACTGAG
GGTGCCAGTGCTGACAGTGAAGTACCACCTGCTGGCGAGCCAATGGAGACTGACAAATCT
GAGACTTTGCCAAGTGCTTCATGA