Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400080577
CDS Infomation

pacid=37473235 polypeptide=PGSC0003DMP400054650 locus=PGSC0003DMG400031378 ID=PGSC0003DMT400080577.v4.03 annot-version=v4.03
Sequence

ATGATGTTCAGTGGACAAAAAGGCGCTAATGGCCTTAACATATTCAAATGGAGAAGGCAC
GGCGAATCATCATTGAGAATAGGATTGCTTGATGATGTGCATCCTGAAATCGAACTGTCA
GACTATCGCAGAGCACCAAGTCCAGGTAGTGAAAGCCCATCTGGGCTTCTTAATGGTGAG
AGCGTTAGTGTTGAACCAATTTCTGATCTGGACTTGTTCTTTGAGAGGCTCTACAACTAT
TATTGCGAGAAAGGATTATGGTGCATTATTATAAAGTGGATATTTGAGCTTCTGAGCCTA
GCTTTCACCATATTCTTTTCTGGATTTTTTCTGTTGTACGTTGATTGGAATGGGCTCCGC
AATGCCAAATGTGGAATGGATGCTGTGGAATCTGGAATTAAGCCTTGTGATCTGGCCAAT
GAAGCTCTTCATCTGCACCCATTGAAACCTCTTACGCTCTTTAAAGGCACTGTGTTGGGT
TACCTGGGGATATTTTCTGTCTACTGGATATTTTGCTTCTTAAGGTTTTTCGCACAGCTA
AGAGAAACCCTGGCAGTCCGTCAGTTCTACTGCAGAAGTCTTCATGTGACAGACAAGGAG
ATACAAACCATTCCATGGGCATCCATTCTTGAAAGGGTTGTTCAGTTACAAGAATTGCAA
CAACTTTGTGTAGTCAAGAATCTTTCCATTCATGATGTGGTTATGCGATTAATGCGGAAG
GAAAATTATTTGATAGGAATGCTTAACAAAGGGCTCCTTTCTTTACCTATTTCTCACTGG
GTACCTGGCGCTGGTCCAACTATCAGTTGTGGCCCCAATGATGTGCGTAGTCGTCTAATA
CTGCCAAAAACCCTTGAATGGACCTTAAATTGGTGCATACTGCAGAGCATGTTTGACAGA
AACTTTTGTATACGCAGGGACTTCATTTCTGATCCTAAAACATTAAAGAAAAGGCTTATG
ATTGTTGGAGTTTTAATGCTTCTCTTATCTCCATTTCTTGTTATATTCATGCTGGTGTAT
CTCTTCTTGAGGCATGCTGAACAGTTCTACAACCATCCAAGTACGGCATCGTCTCGAAGA
TGGTCAAATCTTTCCAAGTGGTTGTTTAGGGAATTCAACGAGGTTGACCATTTGTTTAAG
CATCGTATCAACAGCAGTGCCATACATGCTTCTGATTATCTAAAGCAATTTCCATCTCCT
ATTTTATCTATCGTCGCAAAGTTCATTTCTTTTGTTTCCGGTGGATTTGCTGCTGTTCTT
ATTATCATTGCATTTCTAGAAGAATCTCTGCTGGAAGGCCATATATTTGGTCGCAACTTA
TTCTGGTATGCTGCTGTATTTGGAACTATAACAGCTATAAGCCGGGCTGCAATAACAGAT
GAGCTTCTTGTCCTTGACCCACAGGGAGCAATGTCACTTGTTGTCCAACATACGCACTTT
ATGCCAAAGAGATGGCGAGGGAAAGAAAATACTGAGGCCGTACGAACAGAATTTGAAACT
TTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGACCTCAATTTTTCTTACACCA
TATCTACTGCTATTTGTTGTCCCAAAGAAGGTAGATGATATTTTGCGCTTCATTGCGGAC
TTCACTGTTCACGTTGAGGGTGTTGGTCATGTGTGCAGCTTCAGCGTGTTTGATTTTCAG
AATCATGGCAATAGCAAATATGGATCGCCATTTAGTTCTCCCCGCTTGCAAAGAAGTTCT
CAAGGGAAAATGGAGAAATCATTCCTGAGCTTTCAAACTAGCTATCCTTCCTGGCAACCT
GATGATCATGGAAAACAGTTCATATCAACACTTAAAACGTTTAGAGAGCAAAAGCTGCAG
TTGCATGAAATAGGACCTGCATATCGACCTTCAGAGCTACAGCACTGGAATCCCGACTTT
AGAGGCTTAAGCAATCGAAACAATTTGTTCTCCAGGGAAATGCCTCTCAACAACTTGGGA
GCTGGATTTGGCTCAATGTGGTTAATAGATGGTGGACAGAGGAATTATCCTTACATTCTT
GATTGGTATTATACCTCGCATCCTCACAATACGAGTAGTGATTCAAGAGGCATTGAATCC
AGGCCTCTTCATACTGATAACAGCGAACACCTTAAAGATCCTTGGATGCCACCTCATTTT
GTGCAAAGCAAGGATACAGTTGACGACAACTGGGGTCACTTATTTGAGGACCGAGCACAA
AGTCATCTCGGAGCCACCACATCAGCTCCTGTTTTGAGGGAGAGCATCCTACATCAGGAT
GATTCAAGTAGCATGGCACAATCTATGAGGAGCCAGTGGTGGACTAGAAGTCGACCACAA
GTCACAAATCCTCAGACAAGCTTCCTTGAACCTCCGAATTTCAACAGCAACCCTCATGAT
TATTATGATAATTTCTCTGACAGAAGTCTAGATGAGCAAGAGCAAGAGCTCGAGCACACA
CACGTTGACTTGAGGAATTCTAATAGGTTGGCCAATACCTTCTTCATGGACGATTCGGTT
GGAGACTTCAACCTTCCTTTTGATGATATTTACAGATTGCCCTCAGGAAACCCTACAAGA
AAATTAGATCCTTCAGATCTTGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400054650
PEP Infomation

pacid=37473235 transcript=PGSC0003DMT400080577 locus=PGSC0003DMG400031378 ID=PGSC0003DMT400080577.v4.03 annot-version=v4.03
Sequence

MMFSGQKGANGLNIFKWRRHGESSLRIGLLDDVHPEIELSDYRRAPSPGSESPSGLLNGE
SVSVEPISDLDLFFERLYNYYCEKGLWCIIIKWIFELLSLAFTIFFSGFFLLYVDWNGLR
NAKCGMDAVESGIKPCDLANEALHLHPLKPLTLFKGTVLGYLGIFSVYWIFCFLRFFAQL
RETLAVRQFYCRSLHVTDKEIQTIPWASILERVVQLQELQQLCVVKNLSIHDVVMRLMRK
ENYLIGMLNKGLLSLPISHWVPGAGPTISCGPNDVRSRLILPKTLEWTLNWCILQSMFDR
NFCIRRDFISDPKTLKKRLMIVGVLMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRR
WSNLSKWLFREFNEVDHLFKHRINSSAIHASDYLKQFPSPILSIVAKFISFVSGGFAAVL
IIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITDELLVLDPQGAMSLVVQHTHF
MPKRWRGKENTEAVRTEFETLFQYTGMMLLEEMTSIFLTPYLLLFVVPKKVDDILRFIAD
FTVHVEGVGHVCSFSVFDFQNHGNSKYGSPFSSPRLQRSSQGKMEKSFLSFQTSYPSWQP
DDHGKQFISTLKTFREQKLQLHEIGPAYRPSELQHWNPDFRGLSNRNNLFSREMPLNNLG
AGFGSMWLIDGGQRNYPYILDWYYTSHPHNTSSDSRGIESRPLHTDNSEHLKDPWMPPHF
VQSKDTVDDNWGHLFEDRAQSHLGATTSAPVLRESILHQDDSSSMAQSMRSQWWTRSRPQ
VTNPQTSFLEPPNFNSNPHDYYDNFSDRSLDEQEQELEHTHVDLRNSNRLANTFFMDDSV
GDFNLPFDDIYRLPSGNPTRKLDPSDLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400080577
Transcript Infomation

pacid=37473235 locus=PGSC0003DMG400031378 ID=PGSC0003DMT400080577.v4.03 annot-version=v4.03
Sequence

ATGATGTTCAGTGGACAAAAAGGCGCTAATGGCCTTAACATATTCAAATGGAGAAGGCAC
GGCGAATCATCATTGAGAATAGGATTGCTTGATGATGTGCATCCTGAAATCGAACTGTCA
GACTATCGCAGAGCACCAAGTCCAGGTAGTGAAAGCCCATCTGGGCTTCTTAATGGTGAG
AGCGTTAGTGTTGAACCAATTTCTGATCTGGACTTGTTCTTTGAGAGGCTCTACAACTAT
TATTGCGAGAAAGGATTATGGTGCATTATTATAAAGTGGATATTTGAGCTTCTGAGCCTA
GCTTTCACCATATTCTTTTCTGGATTTTTTCTGTTGTACGTTGATTGGAATGGGCTCCGC
AATGCCAAATGTGGAATGGATGCTGTGGAATCTGGAATTAAGCCTTGTGATCTGGCCAAT
GAAGCTCTTCATCTGCACCCATTGAAACCTCTTACGCTCTTTAAAGGCACTGTGTTGGGT
TACCTGGGGATATTTTCTGTCTACTGGATATTTTGCTTCTTAAGGTTTTTCGCACAGCTA
AGAGAAACCCTGGCAGTCCGTCAGTTCTACTGCAGAAGTCTTCATGTGACAGACAAGGAG
ATACAAACCATTCCATGGGCATCCATTCTTGAAAGGGTTGTTCAGTTACAAGAATTGCAA
CAACTTTGTGTAGTCAAGAATCTTTCCATTCATGATGTGGTTATGCGATTAATGCGGAAG
GAAAATTATTTGATAGGAATGCTTAACAAAGGGCTCCTTTCTTTACCTATTTCTCACTGG
GTACCTGGCGCTGGTCCAACTATCAGTTGTGGCCCCAATGATGTGCGTAGTCGTCTAATA
CTGCCAAAAACCCTTGAATGGACCTTAAATTGGTGCATACTGCAGAGCATGTTTGACAGA
AACTTTTGTATACGCAGGGACTTCATTTCTGATCCTAAAACATTAAAGAAAAGGCTTATG
ATTGTTGGAGTTTTAATGCTTCTCTTATCTCCATTTCTTGTTATATTCATGCTGGTGTAT
CTCTTCTTGAGGCATGCTGAACAGTTCTACAACCATCCAAGTACGGCATCGTCTCGAAGA
TGGTCAAATCTTTCCAAGTGGTTGTTTAGGGAATTCAACGAGGTTGACCATTTGTTTAAG
CATCGTATCAACAGCAGTGCCATACATGCTTCTGATTATCTAAAGCAATTTCCATCTCCT
ATTTTATCTATCGTCGCAAAGTTCATTTCTTTTGTTTCCGGTGGATTTGCTGCTGTTCTT
ATTATCATTGCATTTCTAGAAGAATCTCTGCTGGAAGGCCATATATTTGGTCGCAACTTA
TTCTGGTATGCTGCTGTATTTGGAACTATAACAGCTATAAGCCGGGCTGCAATAACAGAT
GAGCTTCTTGTCCTTGACCCACAGGGAGCAATGTCACTTGTTGTCCAACATACGCACTTT
ATGCCAAAGAGATGGCGAGGGAAAGAAAATACTGAGGCCGTACGAACAGAATTTGAAACT
TTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGACCTCAATTTTTCTTACACCA
TATCTACTGCTATTTGTTGTCCCAAAGAAGGTAGATGATATTTTGCGCTTCATTGCGGAC
TTCACTGTTCACGTTGAGGGTGTTGGTCATGTGTGCAGCTTCAGCGTGTTTGATTTTCAG
AATCATGGCAATAGCAAATATGGATCGCCATTTAGTTCTCCCCGCTTGCAAAGAAGTTCT
CAAGGGAAAATGGAGAAATCATTCCTGAGCTTTCAAACTAGCTATCCTTCCTGGCAACCT
GATGATCATGGAAAACAGTTCATATCAACACTTAAAACGTTTAGAGAGCAAAAGCTGCAG
TTGCATGAAATAGGACCTGCATATCGACCTTCAGAGCTACAGCACTGGAATCCCGACTTT
AGAGGCTTAAGCAATCGAAACAATTTGTTCTCCAGGGAAATGCCTCTCAACAACTTGGGA
GCTGGATTTGGCTCAATGTGGTTAATAGATGGTGGACAGAGGAATTATCCTTACATTCTT
GATTGGTATTATACCTCGCATCCTCACAATACGAGTAGTGATTCAAGAGGCATTGAATCC
AGGCCTCTTCATACTGATAACAGCGAACACCTTAAAGATCCTTGGATGCCACCTCATTTT
GTGCAAAGCAAGGATACAGTTGACGACAACTGGGGTCACTTATTTGAGGACCGAGCACAA
AGTCATCTCGGAGCCACCACATCAGCTCCTGTTTTGAGGGAGAGCATCCTACATCAGGAT
GATTCAAGTAGCATGGCACAATCTATGAGGAGCCAGTGGTGGACTAGAAGTCGACCACAA
GTCACAAATCCTCAGACAAGCTTCCTTGAACCTCCGAATTTCAACAGCAACCCTCATGAT
TATTATGATAATTTCTCTGACAGAAGTCTAGATGAGCAAGAGCAAGAGCTCGAGCACACA
CACGTTGACTTGAGGAATTCTAATAGGTTGGCCAATACCTTCTTCATGGACGATTCGGTT
GGAGACTTCAACCTTCCTTTTGATGATATTTACAGATTGCCCTCAGGAAACCCTACAAGA
AAATTAGATCCTTCAGATCTTGTTTGA